Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21312 Sapria himalayana HOM05D004192 ORTHO05D004917 2.7e-197 691.8 345 100.0
Potri.008G026900 Populus trichocarpa HOM05D004192 ORTHO05D004917 1.2e-112 410.6 318 65.4
Potri.010G233600 Populus trichocarpa HOM05D004192 ORTHO05D004917 1.4e-108 397.1 321 64.2
Sabra10G0181200 Salix brachista HOM05D004192 ORTHO05D004917 6.7e-108 394.8 319 63.9
COL.COLO4_34171 Corchorus olitorius HOM05D004192 ORTHO05D004917 2.6e-107 392.9 321 61.7
CANSAT56G0904 Cannabis sativa HOM05D004192 ORTHO05D004917 3.3e-107 392.5 332 61.7
Lj5g0013826 Lotus japonicus HOM05D004192 ORTHO05D004917 5.7e-107 391.7 258 73.6
Ciclev10031728m.g Citrus clementina HOM05D004192 ORTHO05D004917 7.4e-107 391.3 327 61.5
Sabra08G0018400 Salix brachista HOM05D004192 ORTHO05D004917 1.3e-106 390.6 363 57.0
Thecc.10G097700 Theobroma cacao HOM05D004192 ORTHO05D004917 2.2e-106 389.8 321 62.0
Cpa.g.sc942.1 Carica papaya HOM05D004192 ORTHO05D004917 3.7e-106 389.0 323 60.7
Lalb_Chr02g0151281 Lupinus albus HOM05D004192 ORTHO05D004917 2.4e-105 386.3 309 64.4
PGR044G0968 Punica granatum HOM05D004192 ORTHO05D004917 3.1e-105 386.0 311 63.7
TWI38G0502 Tripterygium wilfordii HOM05D004192 ORTHO05D004917 3.1e-105 386.0 269 71.7
Ca_10484_v3 Cicer arietinum L. HOM05D004192 ORTHO05D004917 5.3e-105 385.2 257 71.6
RcHm_v2.0_Chr1g0334491 Rosa chinensis HOM05D004192 ORTHO05D004917 7.0e-105 384.8 320 62.8
Cc02_g10300 Coffea canephora HOM05D004192 ORTHO05D004917 9.1e-105 384.4 315 63.5
Gorai.008G097500 Gossypium raimondii HOM05D004192 ORTHO05D004917 1.2e-104 384.0 329 59.0
FAN01G1656 Fragaria x ananassa HOM05D004192 ORTHO05D004917 2.0e-104 383.3 309 64.4
Gohir.A12G088900 Gossypium hirsutum HOM05D004192 ORTHO05D004917 2.6e-104 382.9 329 59.0
FvH4_7g06400 Fragaria vesca HOM05D004192 ORTHO05D004917 3.5e-104 382.5 309 64.4
Medtr1g092570 Medicago truncatula HOM05D004192 ORTHO05D004917 4.5e-104 382.1 267 69.7
GSVIVG01034690001 Vitis vinifera HOM05D004192 ORTHO05D004917 4.5e-104 382.1 327 60.2
Lalb_Chr21g0313171 Lupinus albus HOM05D004192 ORTHO05D004917 5.9e-104 381.7 258 72.5
FAN10G1549 Fragaria x ananassa HOM05D004192 ORTHO05D004917 1.3e-103 380.6 309 64.1
Glyma.10G201300 Glycine max HOM05D004192 ORTHO05D004917 2.2e-103 379.8 315 61.6
BcaNung05805 Brassica carinata HOM05D004192 ORTHO05D004917 2.9e-103 379.4 314 59.9
A01p41680 Brassica napus HOM05D004192 ORTHO05D004917 2.9e-103 379.4 314 59.9
BolC1t05384H Brassica oleracea HOM05D004192 ORTHO05D004917 2.9e-103 379.4 314 59.9
BraA01t04242Z Brassica rapa HOM05D004192 ORTHO05D004917 2.9e-103 379.4 314 59.9
Phvul.007G105800 Phaseolus vulgaris HOM05D004192 ORTHO05D004917 2.9e-103 379.4 315 61.6
MD07G1072600 Malus domestica HOM05D004192 ORTHO05D004917 3.8e-103 379.0 323 61.6
Thhalv10020062m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 5.0e-103 378.6 316 59.8
Actinidia18569 Actinidia chinensis HOM05D004192 ORTHO05D004917 1.1e-102 377.5 321 60.4
Dinv31284 Davidia involucrata HOM05D004192 ORTHO05D004917 1.1e-102 377.5 324 60.8
Carub.0003s0979 Capsella rubella HOM05D004192 ORTHO05D004917 1.5e-102 377.1 311 59.8
Duzib114G0707 Durio zibethinus HOM05D004192 ORTHO05D004917 1.5e-102 377.1 270 69.6
Sp3g08830 Schrenkiella parvula HOM05D004192 ORTHO05D004917 1.5e-102 377.1 311 59.2
CARHR085080 Cardamine hirsuta HOM05D004192 ORTHO05D004917 1.9e-102 376.7 311 59.8
Psat6g175320 Pisum sativum HOM05D004192 ORTHO05D004917 1.9e-102 376.7 262 71.8
CsaV3_2G032910 Cucumis sativus L. HOM05D004192 ORTHO05D004917 2.5e-102 376.3 321 59.8
AT3G10550 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 3.2e-102 375.9 309 60.5
VMungo0720G1942 Vigna mungo HOM05D004192 ORTHO05D004917 5.5e-102 375.2 263 70.3
MELO3C019875.2 Cucumis melo HOM05D004192 ORTHO05D004917 7.2e-102 374.8 321 59.2
Glyma.20G189100 Glycine max HOM05D004192 ORTHO05D004917 7.2e-102 374.8 315 61.6
MD02G1244600 Malus domestica HOM05D004192 ORTHO05D004917 9.4e-102 374.4 265 69.8
TAR623G0905 Trochodendron aralioides HOM05D004192 ORTHO05D004917 9.4e-102 374.4 323 60.4
Gohir.A01G129200 Gossypium hirsutum HOM05D004192 ORTHO05D004917 1.2e-101 374.0 326 60.1
ClCG08G008030 Citrullus lanatus HOM05D004192 ORTHO05D004917 1.6e-101 373.6 321 60.4
Gohir.D01G118800 Gossypium hirsutum HOM05D004192 ORTHO05D004917 1.6e-101 373.6 336 58.9
arahy.Tifrunner.gnm1.ann1.CA0PQ2 Arachis hypogaea HOM05D004192 ORTHO05D004917 2.7e-101 372.9 309 61.5
AL3G21970 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 4.7e-101 372.1 309 59.2
Gorai.002G144900 Gossypium raimondii HOM05D004192 ORTHO05D004917 4.7e-101 372.1 326 59.8
arahy.Tifrunner.gnm1.ann1.VIL3TT Arachis hypogaea HOM05D004192 ORTHO05D004917 2.3e-100 369.8 309 60.5
CSS0020257 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 5.2e-100 368.6 321 59.2
Sp6g38220 Schrenkiella parvula HOM05D004192 ORTHO05D004917 6.7e-100 368.2 308 58.4
THA.LOC104816452 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 1.5e-99 367.1 328 57.3
THA.LOC104823194 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 2.6e-99 366.3 311 58.8
FAN06G5118 Fragaria x ananassa HOM05D004192 ORTHO05D004917 4.4e-99 365.5 337 58.8
MSTRG.8112 Avicennia marina HOM05D004192 ORTHO05D004917 1.3e-98 364.0 323 58.8
Eucgr.J01026 Eucalyptus grandis HOM05D004192 ORTHO05D004917 1.7e-98 363.6 319 58.0
TPR.G2517 Trifolium pratense HOM05D004192 ORTHO05D004917 3.7e-98 362.5 291 63.9
Thhalv10012689m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 1.1e-97 360.9 308 57.8
SGA_v2.0_scaffold62G21320 Striga asiatica HOM05D004192 ORTHO05D004917 4.1e-97 359.0 266 66.2
Nn2g13965 Nelumbo nucifera HOM05D004192 ORTHO05D004917 5.3e-97 358.6 309 59.2
Nn6g35085 Nelumbo nucifera HOM05D004192 ORTHO05D004917 1.2e-96 357.5 250 70.4
Migut.F01661 Erythranthe guttata HOM05D004192 ORTHO05D004917 1.6e-96 357.1 307 59.9
Sed0026233 Sechium edule HOM05D004192 ORTHO05D004917 1.6e-96 357.1 344 54.9
DCAR_019044 Daucus carota HOM05D004192 ORTHO05D004917 2.0e-96 356.7 329 57.1
Hund22302 Selenicereus undatus HOM05D004192 ORTHO05D004917 2.7e-96 356.3 334 57.2
Carub.0006s0348 Capsella rubella HOM05D004192 ORTHO05D004917 4.5e-96 355.5 316 56.0
Manes.10G054700 Manihot esculenta HOM05D004192 ORTHO05D004917 5.9e-96 355.1 225 77.3
EL10Ac4g08605 Beta vulgaris HOM05D004192 ORTHO05D004917 1.3e-95 354.0 250 69.2
Aa31LG3G3400 Aethionema arabicum HOM05D004192 ORTHO05D004917 2.2e-95 353.2 321 56.1
Rhsim03G0109700 Rhododendron simsii HOM05D004192 ORTHO05D004917 3.8e-95 352.4 349 54.4
Duzib128G0631 Durio zibethinus HOM05D004192 ORTHO05D004917 6.5e-95 351.7 309 59.5
BolC9t59967H Brassica oleracea HOM05D004192 ORTHO05D004917 1.9e-94 350.1 308 55.2
Ah.04g163610 Amaranthus hybridus HOM05D004192 ORTHO05D004917 2.5e-94 349.7 258 67.1
BcaC06g32164 Brassica carinata HOM05D004192 ORTHO05D004917 2.5e-94 349.7 308 55.8
A10p31560 Brassica napus HOM05D004192 ORTHO05D004917 5.5e-94 348.6 306 55.2
BraA10t45202Z Brassica rapa HOM05D004192 ORTHO05D004917 5.5e-94 348.6 306 55.2
HanXRQChr08g0218151 Helianthus annuus HOM05D004192 ORTHO05D004917 1.2e-93 347.4 333 55.6
AL6G14190 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 1.6e-93 347.1 272 59.6
AT5G04540 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 1.6e-93 347.1 261 61.7
Solyc11g007670.3 Solanum lycopersicum HOM05D004192 ORTHO05D004917 1.6e-93 347.1 319 57.4
HanXRQChr12g0368431 Helianthus annuus HOM05D004192 ORTHO05D004917 2.1e-93 346.7 265 65.3
Sopen11g003530 Solanum pennellii HOM05D004192 ORTHO05D004917 4.7e-93 345.5 319 57.1
Prupe.2G090700 Prunus persica HOM05D004192 ORTHO05D004917 8.0e-93 344.7 227 72.7
Lsat_1_v5_gn_8_23081 Lactuca sativa HOM05D004192 ORTHO05D004917 1.4e-92 344.0 332 55.4
Sc20g0001360 Simmondsia chinensis HOM05D004192 ORTHO05D004917 6.8e-92 341.7 254 66.1
C02p01980 Brassica napus HOM05D004192 ORTHO05D004917 8.8e-92 341.3 308 54.5
CiPaw.13G035500 Carya illinoinensis HOM05D004192 ORTHO05D004917 8.8e-92 341.3 219 73.5
Peaxi162Scf00398g00058 Petunia axillaris HOM05D004192 ORTHO05D004917 8.8e-92 341.3 326 56.7
BraA02t04817Z Brassica rapa HOM05D004192 ORTHO05D004917 1.5e-91 340.5 308 54.5
PSO384G3766 Papaver somniferum HOM05D004192 ORTHO05D004917 1.5e-91 340.5 331 54.7
Haze_02630 Corylus avellana HOM05D004192 ORTHO05D004917 2.0e-91 340.1 453 45.3
ECA233G2766 Erigeron canadensis HOM05D004192 ORTHO05D004917 2.0e-91 340.1 332 53.9
PSO339G1524 Papaver somniferum HOM05D004192 ORTHO05D004917 2.6e-91 339.7 331 55.0
BolC2t06155H Brassica oleracea HOM05D004192 ORTHO05D004917 4.4e-91 339.0 308 54.2
Gohir.D12G087300 Gossypium hirsutum HOM05D004192 ORTHO05D004917 1.1e-89 334.3 329 53.8
ATR0820G117 Amborella trichopoda HOM05D004192 ORTHO05D004917 3.1e-89 332.8 260 62.3
Oeu026557.1 Olea europaea HOM05D004192 ORTHO05D004917 9.1e-89 331.3 371 50.4
Lj2C27G6 Lonicera japonica HOM05D004192 ORTHO05D004917 2.0e-88 330.1 321 53.9
HPP92_001744 Vanilla planifolia HOM05D004192 ORTHO05D004917 7.7e-88 328.2 310 54.5
Aa31LG11G5410 Aethionema arabicum HOM05D004192 ORTHO05D004917 2.9e-87 326.2 317 53.6
Aqoxy1G00968 Aquilegia oxysepala HOM05D004192 ORTHO05D004917 2.9e-87 326.2 268 63.1
FAN03G2327 Fragaria x ananassa HOM05D004192 ORTHO05D004917 3.8e-87 325.9 309 57.3
Sed0024945 Sechium edule HOM05D004192 ORTHO05D004917 3.2e-86 322.8 226 67.7
Nitab4.5_0000593g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 1.2e-85 320.9 334 53.3
HanXRQChr14g0456301 Helianthus annuus HOM05D004192 ORTHO05D004917 6.1e-85 318.5 260 60.0
Lj3A933G36 Lonicera japonica HOM05D004192 ORTHO05D004917 1.0e-84 317.8 314 53.5
SEGI_16113 Sequoiadendron giganteum HOM05D004192 ORTHO05D004917 1.0e-84 317.8 268 59.7
ECA238G3394 Erigeron canadensis HOM05D004192 ORTHO05D004917 1.7e-82 310.5 240 63.8
Os08g0556700 Oryza sativa ssp. japonica HOM05D004192 ORTHO05D004917 9.5e-78 294.7 259 58.7
MBI17_g20211_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 2.1e-77 293.5 222 66.2
Hma1.2p1_0492F.1_g164740 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 2.8e-77 293.1 195 71.8
CAN.G135.58 Capsicum annuum HOM05D004192 ORTHO05D004917 3.6e-69 266.2 195 67.2
Psat0s4326g0040 Pisum sativum HOM05D004192 ORTHO05D004917 1.1e-68 264.6 169 74.6
CSS0018543 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 5.2e-68 262.3 190 67.4
BcaB04g21235 Brassica carinata HOM05D004192 ORTHO05D004917 6.8e-68 261.9 173 69.4
AagrBONN_evm.TU.Sc2ySwM_368.2559 Anthoceros agrestis HOM05D004192 ORTHO05D004917 4.1e-65 252.7 263 51.3
CDE06G2538 Ceratophyllum demersum HOM05D004192 ORTHO05D004917 8.6e-63 245.0 172 68.6
Atru.chr12.952 Acer truncatum HOM05D004192 ORTHO05D004917 2.1e-61 240.4 168 69.6
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 1.6e-56 224.2 249 50.2
Zm00001eb039660 Zea mays HOM05D004192 ORTHO05D004917 3.5e-56 223.0 257 48.6
PGSC0003DMG402027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 1.7e-55 220.7 157 67.5
Pp3c22_15020 Physcomitrium patens HOM05D004192 ORTHO05D004917 2.4e-52 210.3 297 42.8
vmacro07217 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 3.1e-52 209.9 146 70.5
Mapoly0087s0031 Marchantia polymorpha HOM05D004192 ORTHO05D004917 1.7e-50 204.1 279 44.1
Pp3c18_20050 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.2e-48 198.0 299 40.1
Nitab4.5_0003408g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 2.8e-45 186.8 133 66.2
C09p72230 Brassica napus HOM05D004192 ORTHO05D004917 4.4e-43 179.5 119 70.6
unitig_736.g22321 Utricularia gibba HOM05D004192 ORTHO05D004917 1.0e-39 168.3 200 50.5
Psat0s3097g0040 Pisum sativum HOM05D004192 ORTHO05D004917 5.1e-39 166.0 98 79.6
CiPaw.14G028000 Carya illinoinensis HOM05D004192 ORTHO05D004917 1.6e-37 161.0 107 72.9
AUR62041537 Chenopodium quinoa HOM05D004192 ORTHO05D004917 2.9e-34 150.2 317 34.7
AUR62041535 Chenopodium quinoa HOM05D004192 ORTHO05D004917 2.4e-33 147.1 317 34.4
Lsat_1_v5_gn_2_102840 Lactuca sativa HOM05D004192 ORTHO05D004917 1.1e-30 138.3 223 40.8
PGSC0003DMG401027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 3.7e-29 133.3 153 48.4
QL04p040713 Quercus lobata HOM05D004192 ORTHO05D004917 7.6e-19 99.0 113 52.2
RcHm_v2.0_Chr4g0433221 Rosa chinensis HOM05D004192 ORTHO05D004917 1.9e-14 84.3 64 65.6
RcHm_v2.0_Chr0c16g0499861 Rosa chinensis HOM05D004192 ORTHO05D004917 3.3e-14 83.6 55 72.7
Rhsim01G0150300 Rhododendron simsii HOM05D004192 ORTHO05D004917 1.2e-11 75.1 71 50.7
Lsat_1_v5_gn_6_80241 Lactuca sativa HOM05D004192 ORTHO05D004917 6.1e-08 62.8 49 67.3
Cfa026029 Carpinus fangiana HOM05D004192 ORTHO05D004917 8.8e-07 58.9 66 45.5
AL4G18520 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.5e-06 58.2 35 74.3
AL4G19510 Arabidopsis lyrata HOM05D002764 ORTHO05D002960 1.5e-06 58.2 35 74.3
AL5G23210 Arabidopsis lyrata HOM05D063572 ORTHO05D002960 1.5e-06 58.2 35 74.3
Nitab4.5_0003408g0010 Nicotiana tabacum HOM05D004192 ORTHO05D004917 1.5e-06 58.2 89 39.3


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