Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21282 Sapria himalayana HOM05D004809 ORTHO05D006732 1.6e-149 532.7 269 100.0
Peaxi162Scf00244g01123 Petunia axillaris HOM05D004809 ORTHO05D006732 1.6e-24 117.5 161 44.7
Ciclev10031499m.g Citrus clementina HOM05D004809 ORTHO05D006732 2.8e-24 116.7 151 46.4
MD07G1067800 Malus domestica HOM05D004809 ORTHO05D006732 1.0e-23 114.8 141 44.7
Duzib106G1880 Durio zibethinus HOM05D004809 ORTHO05D006732 1.8e-23 114.0 157 42.7
MD02G1248400 Malus domestica HOM05D004809 ORTHO05D006732 1.8e-23 114.0 141 45.4
Gorai.008G098400 Gossypium raimondii HOM05D004809 ORTHO05D006732 3.0e-23 113.2 157 42.0
Prupe.2G084800 Prunus persica HOM05D004809 ORTHO05D006732 4.0e-23 112.8 141 44.7
RcHm_v2.0_Chr1g0333111 Rosa chinensis HOM05D004809 ORTHO05D006732 4.0e-23 112.8 141 45.4
FvH4_5g38020 Fragaria vesca HOM05D004809 ORTHO05D006732 5.2e-23 112.5 141 46.1
Manes.07G089701 Manihot esculenta HOM05D004809 ORTHO05D006732 6.8e-23 112.1 171 39.8
Potri.008G024700 Populus trichocarpa HOM05D004809 ORTHO05D006732 6.8e-23 112.1 166 40.4
ATR0820G085 Amborella trichopoda HOM05D004809 ORTHO05D006732 8.9e-23 111.7 155 42.6
Gohir.D12G091000 Gossypium hirsutum HOM05D004809 ORTHO05D006732 8.9e-23 111.7 157 41.4
Nitab4.5_0000962g0070 Nicotiana tabacum HOM05D004809 ORTHO05D006732 8.9e-23 111.7 155 45.2
Nitab4.5_0005390g0010 Nicotiana tabacum HOM05D004809 ORTHO05D006732 8.9e-23 111.7 143 47.6
Thecc.10G104900 Theobroma cacao HOM05D004809 ORTHO05D006732 8.9e-23 111.7 151 44.4
arahy.Tifrunner.gnm1.ann1.9JEX28 Arachis hypogaea HOM05D004809 ORTHO05D006732 1.2e-22 111.3 143 45.5
arahy.Tifrunner.gnm1.ann1.RW77QZ Arachis hypogaea HOM05D004809 ORTHO05D006732 1.2e-22 111.3 143 45.5
Oeu015034.1 Olea europaea HOM05D004809 ORTHO05D006732 1.2e-22 111.3 156 43.6
Psat6g176720 Pisum sativum HOM05D004809 ORTHO05D006732 1.5e-22 110.9 157 42.0
Zm00001eb063700 Zea mays HOM05D004809 ORTHO05D006732 1.5e-22 110.9 158 40.5
Aqoxy4G02860 Aquilegia oxysepala HOM05D004809 ORTHO05D006732 2.0e-22 110.5 142 43.7
MELO3C012363.2 Cucumis melo HOM05D004809 ORTHO05D006732 2.0e-22 110.5 161 40.4
FAN04G1536 Fragaria x ananassa HOM05D004809 ORTHO05D006732 2.0e-22 110.5 139 46.0
HanXRQChr05g0146831 Helianthus annuus HOM05D004809 ORTHO05D006732 2.0e-22 110.5 143 45.5
Haze_02592 Corylus avellana HOM05D004809 ORTHO05D006732 2.6e-22 110.2 157 40.8
Gohir.A12G091000 Gossypium hirsutum HOM05D004809 ORTHO05D006732 2.6e-22 110.2 157 41.4
Rhsim03G0105000 Rhododendron simsii HOM05D004809 ORTHO05D006732 2.6e-22 110.2 158 41.1
Sabra08G0016600 Salix brachista HOM05D004809 ORTHO05D006732 2.6e-22 110.2 166 40.4
unitig_0.g851 Utricularia gibba HOM05D004809 ORTHO05D006732 2.6e-22 110.2 143 44.1
Actinidia18582 Actinidia chinensis HOM05D004809 ORTHO05D006732 3.4e-22 109.8 143 45.5
Migut.F00896 Erythranthe guttata HOM05D004809 ORTHO05D006732 3.4e-22 109.8 157 40.1
Hma1.2p1_0352F.1_g133010 Hydrangea macrophylla HOM05D004809 ORTHO05D006732 3.4e-22 109.8 143 44.8
Lalb_Chr02g0151411 Lupinus albus HOM05D004809 ORTHO05D006732 3.4e-22 109.8 150 45.3
Os03g0835800 Oryza sativa ssp. japonica HOM05D004809 ORTHO05D006732 3.4e-22 109.8 158 40.5
PGSC0003DMG400019479 Solanum tuberosum HOM05D004809 ORTHO05D006732 3.4e-22 109.8 151 42.4
CANSAT56G2003 Cannabis sativa HOM05D004809 ORTHO05D006732 4.4e-22 109.4 143 44.1
QL04p042558 Quercus lobata HOM05D004809 ORTHO05D006732 4.4e-22 109.4 143 46.2
VMungo0720G0771 Vigna mungo HOM05D004809 ORTHO05D006732 4.4e-22 109.4 158 41.1
Atru.chr12.976 Acer truncatum HOM05D004809 ORTHO05D006732 5.7e-22 109.0 157 40.8
Lj5g0024267 Lotus japonicus HOM05D004809 ORTHO05D006732 5.7e-22 109.0 143 45.5
HPP92_025130 Vanilla planifolia HOM05D004809 ORTHO05D006732 5.7e-22 109.0 134 45.5
FAN08G1717 Fragaria x ananassa HOM05D004809 ORTHO05D006732 7.5e-22 108.6 138 45.7
FAN18G3489 Fragaria x ananassa HOM05D004809 ORTHO05D006732 7.5e-22 108.6 138 45.7
Glyma.20G187700 Glycine max HOM05D004809 ORTHO05D006732 7.5e-22 108.6 141 46.1
Medtr1g492850 Medicago truncatula HOM05D004809 ORTHO05D006732 7.5e-22 108.6 143 46.9
PGR142G2585 Punica granatum HOM05D004809 ORTHO05D006732 7.5e-22 108.6 155 41.3
TPR.G2503 Trifolium pratense HOM05D004809 ORTHO05D006732 7.5e-22 108.6 157 41.4
Ca_10498_v3 Cicer arietinum L. HOM05D004809 ORTHO05D006732 9.8e-22 108.2 157 42.0
Phvul.007G104300 Phaseolus vulgaris HOM05D004809 ORTHO05D006732 9.8e-22 108.2 149 43.0
Sed0005221 Sechium edule HOM05D004809 ORTHO05D006732 1.3e-21 107.8 169 37.9
Sc06g0002220 Simmondsia chinensis HOM05D004809 ORTHO05D006732 1.3e-21 107.8 157 40.8
CAN.G534.16 Capsicum annuum HOM05D004809 ORTHO05D006732 1.7e-21 107.5 143 45.5
ECA232G3125 Erigeron canadensis HOM05D004809 ORTHO05D006732 1.7e-21 107.5 143 44.8
Lsat_1_v5_gn_0_7340 Lactuca sativa HOM05D004809 ORTHO05D006732 1.7e-21 107.5 144 44.4
CiPaw.13G037200 Carya illinoinensis HOM05D004809 ORTHO05D006732 2.2e-21 107.1 143 45.5
Sp4g18640 Schrenkiella parvula HOM05D004809 ORTHO05D006732 2.2e-21 107.1 143 46.2
BcaB02g09358 Brassica carinata HOM05D004809 ORTHO05D006732 2.9e-21 106.7 142 43.0
BcaC02g11751 Brassica carinata HOM05D004809 ORTHO05D006732 2.9e-21 106.7 142 45.1
A05p09440 Brassica napus HOM05D004809 ORTHO05D006732 2.9e-21 106.7 142 43.0
A05p09490 Brassica napus HOM05D004809 ORTHO05D006732 2.9e-21 106.7 142 43.0
BraA05t19899Z Brassica rapa HOM05D004809 ORTHO05D006732 2.9e-21 106.7 142 43.0
Nn6g35016 Nelumbo nucifera HOM05D004809 ORTHO05D006732 2.9e-21 106.7 159 42.1
Sopen11g003210 Solanum pennellii HOM05D004809 ORTHO05D006732 2.9e-21 106.7 157 40.8
C04p11750 Brassica napus HOM05D004809 ORTHO05D006732 3.7e-21 106.3 142 43.0
Thhalv10017936m.g Eutrema salsugineum HOM05D004809 ORTHO05D006732 3.7e-21 106.3 157 40.8
Solyc11g007320.2 Solanum lycopersicum HOM05D004809 ORTHO05D006732 3.7e-21 106.3 157 40.8
vmacro07229 Vaccinium macrocarpon HOM05D004809 ORTHO05D006732 3.7e-21 106.3 144 44.4
BolC4t22822H Brassica oleracea HOM05D004809 ORTHO05D006732 6.4e-21 105.5 145 44.1
AUR62035490 Chenopodium quinoa HOM05D004809 ORTHO05D006732 6.4e-21 105.5 155 41.3
SalBow6G1224 Salvia bowleyana HOM05D004809 ORTHO05D006732 6.4e-21 105.5 144 43.1
EL10Ac4g08666 Beta vulgaris HOM05D004809 ORTHO05D006732 8.3e-21 105.1 141 44.7
Ah.04g163730 Amaranthus hybridus HOM05D004809 ORTHO05D006732 1.1e-20 104.8 144 45.1
Cc02_g09980 Coffea canephora HOM05D004809 ORTHO05D006732 1.1e-20 104.8 154 39.6
DCAR_028402 Daucus carota HOM05D004809 ORTHO05D006732 1.4e-20 104.4 141 45.4
COL.COLO4_20964 Corchorus olitorius HOM05D004809 ORTHO05D006732 2.4e-20 103.6 182 38.5
Eucgr.G02708 Eucalyptus grandis HOM05D004809 ORTHO05D006732 5.4e-20 102.4 163 38.7
AL4G32520 Arabidopsis lyrata HOM05D004809 ORTHO05D006732 7.0e-20 102.1 141 44.7
GSVIVG01034738001 Vitis vinifera HOM05D004809 ORTHO05D006732 7.0e-20 102.1 139 43.2
Mapoly0052s0089 Marchantia polymorpha HOM05D004809 ORTHO05D006732 1.2e-19 101.3 142 40.1
SMO174G0255 Selaginella moellendorffii HOM05D004809 ORTHO05D006732 2.0e-19 100.5 143 41.3
AT2G36360 Arabidopsis thaliana HOM05D004809 ORTHO05D006732 2.7e-19 100.1 141 44.0
Pp3c12_16110 Physcomitrium patens HOM05D004809 ORTHO05D006732 1.3e-18 97.8 141 41.1
Pp3c12_16113 Physcomitrium patens HOM05D004809 ORTHO05D006732 1.3e-18 97.8 141 41.1
AagrBONN_evm.TU.Sc2ySwM_228.3607 Anthoceros agrestis HOM05D004809 ORTHO05D006732 2.5e-17 93.6 143 39.9
Lj2A29T80 Lonicera japonica HOM05D004809 ORTHO05D006732 2.5e-17 93.6 51 76.5
RcHm_v2.0_Chr1g0333981 Rosa chinensis HOM05D004809 ORTHO05D006732 4.3e-17 92.8 51 72.5
QL04p042573 Quercus lobata HOM05D004809 ORTHO05D006732 9.5e-17 91.7 51 72.5
QL04p042697 Quercus lobata HOM05D004809 ORTHO05D006732 9.5e-17 91.7 51 72.5
Dinv20809 Davidia involucrata HOM05D004809 ORTHO05D006732 1.2e-16 91.3 51 72.5
Carub.0004s1815 Capsella rubella HOM05D004809 ORTHO05D006732 1.6e-16 90.9 129 43.4
Aa31LG5G21540 Aethionema arabicum HOM05D004809 ORTHO05D006732 2.8e-16 90.1 51 74.5
CBR_g30411 Chara braunii HOM05D004809 ORTHO05D006732 4.7e-16 89.4 143 39.2
Lsat_1_v5_gn_9_14041 Lactuca sativa HOM05D004809 ORTHO05D006732 6.2e-16 89.0 52 69.2
AUR62041546 Chenopodium quinoa HOM05D004809 ORTHO05D006732 1.4e-15 87.8 51 72.5
SEGI_30675 Sequoiadendron giganteum HOM05D004809 ORTHO05D006732 8.3e-13 78.6 51 58.8
SGA_v2.0_scaffold62G21351 Striga asiatica HOM05D004809 ORTHO05D006732 4.1e-12 76.3 135 35.6
MCO03G163 Micromonas commoda HOM05D004809 ORTHO05D006732 3.5e-11 73.2 148 37.2
CSS0050047 Camellia sinensis var. sinensis HOM05D004809 ORTHO05D006732 3.3e-09 66.6 122 36.9
ClCG05G021650 Citrullus lanatus HOM05D004809 ORTHO05D006732 1.2e-08 64.7 151 31.8
PRCOL_00000996 Prasinoderma coloniale HOM05D004809 ORTHO05D006732 8.9e-07 58.5 53 45.3


User provided reference genes

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