Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21225 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-130 469.2 241 100.0
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-39 164.9 160 55.6
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-39 164.9 160 55.6
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-37 160.6 166 52.4
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-36 157.1 162 53.7
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 6.3e-36 155.2 160 53.1
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-32 141.7 132 56.1
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 1.1e-29 134.4 140 54.3
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-23 112.1 162 43.8
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-22 110.9 111 60.4
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-22 110.2 134 46.3
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-21 105.9 82 64.6
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.6e-18 96.7 140 39.3
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.9e-18 95.5 148 37.2
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.9e-18 95.5 148 37.2
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-18 95.5 82 57.3
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-17 94.4 140 38.6
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.8e-17 92.8 157 37.6
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.0e-17 92.4 140 38.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.1e-16 91.3 149 35.6
SHI18086 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-16 91.3 78 65.4
Cpa.g.sc89.49 Carica papaya HOM05D000002 ORTHO05D000001 1.9e-16 90.5 115 43.5
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 5.5e-16 89.0 164 34.1
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.4e-16 88.2 140 38.6
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-15 86.7 147 34.0
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-15 86.7 166 33.1
ECA238G0397 Erigeron canadensis HOM05D000152 ORTHO05D000609 4.7e-15 85.9 162 35.8
Migut.J01234 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.1e-15 85.5 121 38.8
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.1e-15 85.5 149 37.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.4e-14 84.3 157 34.4
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-14 83.6 162 33.3
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-14 82.4 166 31.9
Thhalv10011941m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 6.7e-14 82.0 129 39.5
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-13 80.5 161 36.0
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.6e-13 80.1 124 37.9
THA.LOC109116120 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.6e-13 80.1 142 33.8
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.6e-13 80.1 151 34.4
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 5.7e-13 79.0 165 30.9
THA.LOC109115967 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.7e-13 79.0 158 32.9
Migut.D01784 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.5e-13 78.6 144 37.5
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.5e-13 78.6 127 39.4
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.5e-13 78.6 169 32.0
THA.LOC109116072 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-12 77.8 151 32.5
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-12 77.8 151 29.8
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.2e-12 77.0 166 30.7
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.2e-12 77.0 152 30.9
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.8e-12 76.6 151 31.8
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 3.7e-12 76.3 158 31.6
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 3.7e-12 76.3 82 47.6
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-12 75.9 162 29.6
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.8e-11 73.9 160 31.2
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-11 73.9 166 28.9
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.8e-11 73.9 162 29.6
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.8e-11 73.9 162 29.6
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-11 73.6 142 36.6
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-11 72.8 166 29.5
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 5.3e-11 72.4 152 29.6
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-11 72.4 177 27.7
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 7.0e-11 72.0 122 41.8
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.0e-11 72.0 159 29.6
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.1e-11 71.6 169 30.2
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-10 71.2 108 41.7
THA.LOC104825710 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-10 71.2 158 28.5
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-10 71.2 151 29.8
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.6e-10 70.9 146 32.9
THA.LOC104798820 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.6e-10 70.9 147 32.0
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 1.6e-10 70.9 134 39.6
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 2.0e-10 70.5 152 28.9
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.7e-10 70.1 159 28.3
Atru.chr2.2332 Acer truncatum HOM05D000002 ORTHO05D000001 4.5e-10 69.3 55 65.5
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 7.7e-10 68.6 175 25.1
Sp1g37055 Schrenkiella parvula HOM05D000002 ORTHO05D000001 7.7e-10 68.6 138 30.4
Duzib205G0987 Durio zibethinus HOM05D000002 ORTHO05D000001 1.3e-09 67.8 144 31.9
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-09 67.4 154 27.3
Solyc06g033930.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.2e-09 67.0 125 32.0
SHI06187 Sapria himalayana HOM05D017849 ORTHO05D000001 2.9e-09 66.6 134 29.9
Psat3g090640 Pisum sativum HOM05D000002 ORTHO05D000001 3.8e-09 66.2 138 33.3
Sopen10g015910 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-09 66.2 165 26.1
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.0e-09 65.9 137 32.8
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.5e-09 65.5 141 29.8
SHI20153 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-09 65.5 41 75.6
Atru.chr3.2493 Acer truncatum HOM05D000002 ORTHO05D000001 8.5e-09 65.1 49 63.3
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 8.5e-09 65.1 155 29.0
THA.LOC104822764 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-08 64.7 137 32.8
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 64.3 81 42.0
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-08 64.3 108 39.8
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-08 63.2 165 28.5
AUR62008990 Chenopodium quinoa HOM05D000720 ORTHO05D000549 4.2e-08 62.8 83 41.0
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.2e-08 62.8 40 72.5
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 4.2e-08 62.8 160 29.4
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 4.2e-08 62.8 151 29.1
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 172 27.3
SHI31489 Sapria himalayana HOM05D007985 ORTHO05D364692 4.2e-08 62.8 39 79.5
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 143 25.9
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.5e-08 62.4 143 25.2
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-08 62.4 170 24.7
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 5.5e-08 62.4 82 31.7
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-08 62.0 158 29.1
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-08 62.0 158 29.1
SHI31249 Sapria himalayana HOM05D007985 ORTHO05D000062 7.2e-08 62.0 45 71.1
TPR.G27008 Trifolium pratense HOM05D000002 ORTHO05D000001 7.2e-08 62.0 145 26.2
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 9.4e-08 61.6 137 25.5
RcHm_v2.0_Chr7g0178931 Rosa chinensis HOM05D000002 ORTHO05D000001 9.4e-08 61.6 134 31.3
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-07 61.2 154 28.6
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 1.2e-07 61.2 158 30.4
Solyc02g030370.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-07 61.2 82 37.8
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 122 30.3
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 143 28.0
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 170 25.3
COL.COLO4_28232 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-07 60.8 130 29.2
Sabra19G0015700 Salix brachista HOM05D000002 ORTHO05D000001 1.6e-07 60.8 111 30.6
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.1e-07 60.5 134 26.1
SHI05045 Sapria himalayana HOM05D007949 ORTHO05D010250 2.1e-07 60.5 36 88.9
SHI20753 Sapria himalayana HOM05D007985 ORTHO05D369163 2.1e-07 60.5 38 78.9
Sopen08g014470 Solanum pennellii HOM05D002431 ORTHO05D000001 2.7e-07 60.1 120 31.7
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 2.7e-07 60.1 242 26.4
Cc06_g20010 Coffea canephora HOM05D000002 ORTHO05D000001 4.7e-07 59.3 82 37.8
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-07 59.3 159 23.9
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-07 59.3 154 26.6
MD12G1254700 Malus domestica HOM05D002861 ORTHO05D003104 6.1e-07 58.9 134 26.9
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 6.1e-07 58.9 58 48.3
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 6.1e-07 58.9 143 25.9
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 58.9 142 32.4
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 8.0e-07 58.5 82 34.1
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 122 31.1
Sopen08g012970 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 82 34.1
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 58.2 167 24.6
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.0e-06 58.2 153 24.2
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.0e-06 58.2 141 28.4
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-06 57.8 139 27.3
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-06 57.8 152 25.7
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-06 57.8 126 30.2
Peaxi162Scf00404g00036 Petunia axillaris HOM05D000002 ORTHO05D000001 2.3e-06 57.0 122 25.4
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-06 56.6 82 35.4
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 3.0e-06 56.6 81 40.7
Solyc12g038100.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.0e-06 56.6 73 38.4
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 3.0e-06 56.6 144 25.7
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 4.0e-06 56.2 66 39.4
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.0e-06 56.2 82 36.6
EL10Ac4g09072 Beta vulgaris HOM05D000002 ORTHO05D000001 5.2e-06 55.8 78 37.2
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-06 55.8 164 27.4
THA.LOC104808376 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.8e-06 55.5 134 29.9
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 82 32.9


User provided reference genes

Program Settings