Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 3.1e-166 588.6 297 100.0
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.4e-60 237.7 233 57.1
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 1.1e-59 234.6 244 57.0
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 2.6e-59 233.4 240 57.1
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 3.3e-59 233.0 244 56.6
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.3e-58 231.1 234 58.1
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 2.8e-58 229.9 238 56.3
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 2.8e-58 229.9 238 56.3
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 2.8e-58 229.9 238 56.3
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 4.8e-58 229.2 241 56.0
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 2.4e-57 226.9 235 57.0
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 4.1e-57 226.1 228 57.0
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 5.3e-57 225.7 240 55.8
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 7.0e-57 225.3 241 56.8
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.2e-56 224.6 236 56.4
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 2.6e-56 223.4 243 53.9
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 3.5e-56 223.0 234 55.6
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 4.5e-56 222.6 229 55.9
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 7.7e-56 221.9 233 53.6
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 7.7e-56 221.9 233 53.6
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.0e-55 221.5 235 55.3
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 1.0e-55 221.5 229 56.8
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 1.0e-55 221.5 231 56.7
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.7e-55 220.7 234 55.6
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.7e-55 220.7 239 53.6
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.7e-55 220.7 244 55.3
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 2.2e-55 220.3 234 54.7
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 2.9e-55 219.9 246 53.7
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 2.9e-55 219.9 245 53.9
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 2.9e-55 219.9 236 55.1
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 3.8e-55 219.5 239 53.1
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 5.0e-55 219.2 236 55.1
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 5.0e-55 219.2 236 52.5
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 5.0e-55 219.2 241 54.8
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 1.1e-54 218.0 235 54.9
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.1e-54 218.0 234 53.4
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 1.5e-54 217.6 235 54.5
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 1.9e-54 217.2 236 54.7
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 2.5e-54 216.9 247 53.0
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 3.2e-54 216.5 237 54.4
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 3.2e-54 216.5 240 53.3
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 3.2e-54 216.5 234 55.1
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 7.2e-54 215.3 237 55.7
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 7.2e-54 215.3 242 53.3
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 7.2e-54 215.3 234 53.4
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 9.4e-54 214.9 239 52.7
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 1.2e-53 214.5 238 53.4
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.6e-53 214.2 187 64.2
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 1.6e-53 214.2 230 53.9
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 3.6e-53 213.0 243 53.9
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 8.0e-53 211.8 230 54.8
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 1.0e-52 211.5 240 50.4
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 1.4e-52 211.1 230 53.9
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 1.4e-52 211.1 240 51.7
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 5.2e-52 209.1 240 50.8
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 5.2e-52 209.1 279 45.2
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 6.7e-52 208.8 244 52.5
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 1.5e-51 207.6 219 55.7
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 2.0e-51 207.2 265 49.4
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 2.0e-51 207.2 244 52.0
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 3.3e-51 206.5 240 50.0
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 4.4e-51 206.1 241 50.6
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 2.8e-50 203.4 245 50.6
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 2.8e-50 203.4 239 51.0
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 3.7e-50 203.0 239 51.9
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 8.2e-50 201.8 243 51.4
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 1.1e-49 201.4 236 50.0
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.1e-49 201.4 228 52.6
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.1e-49 201.4 240 49.6
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.4e-49 201.1 234 50.9
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 3.1e-49 199.9 234 50.0
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.1e-49 199.9 228 52.2
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 5.3e-49 199.1 237 51.9
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 5.3e-49 199.1 233 50.2
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 1.2e-48 198.0 223 53.8
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 1.6e-48 197.6 220 53.6
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 2.0e-48 197.2 235 50.2
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 2.6e-48 196.8 223 52.9
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 4.5e-48 196.1 234 50.4
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 4.5e-48 196.1 236 50.4
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.0e-47 194.9 230 50.4
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.7e-47 194.1 233 50.2
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 8.5e-47 191.8 233 49.8
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 8.5e-47 191.8 233 49.8
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 1.5e-46 191.0 233 46.8
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 1.9e-46 190.7 243 46.5
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 7.2e-46 188.7 243 46.9
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 7.2e-46 188.7 233 49.4
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 9.4e-46 188.3 233 48.9
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 9.4e-46 188.3 233 49.4
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 1.2e-45 188.0 232 46.6
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 1.6e-45 187.6 232 49.6
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 6.8e-44 182.2 222 51.4
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 3.4e-43 179.9 262 42.7
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 5.7e-43 179.1 222 48.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.3e-39 167.9 217 48.8
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 2.2e-39 167.2 234 47.9
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.8e-39 166.4 234 45.7
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 8.5e-39 165.2 241 46.9
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 4.7e-37 159.5 223 47.5
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 9.8e-35 151.8 134 61.2
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 3.4e-27 126.7 149 49.0
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 1.1e-25 121.7 120 55.0
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 3.9e-23 113.2 169 39.6
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 5.6e-22 109.4 152 46.1
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 4.7e-21 106.3 131 47.3
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.5e-19 101.3 168 42.9
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 5.8e-19 99.4 169 39.6
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.2e-18 97.4 228 33.3
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.9e-18 96.3 172 35.5
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 7.0e-17 92.4 226 31.9
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 1.7e-15 87.8 101 53.5
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 1.2e-11 75.1 165 32.1
SHI10174 Sapria himalayana HOM05D006939 ORTHO05D008616 4.3e-06 56.6 29 89.7


User provided reference genes

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