Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21022 Sapria himalayana HOM05D004092 ORTHO05D005448 2.9e-108 395.2 196 100.0
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 3.3e-67 258.8 195 69.2
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 3.6e-66 255.4 195 68.2
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 1.1e-65 253.8 195 68.7
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 1.8e-65 253.1 195 66.7
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 6.8e-65 251.1 195 65.1
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 8.9e-65 250.8 195 66.2
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 8.9e-65 250.8 195 66.2
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 3.4e-64 248.8 194 64.9
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 7.5e-64 247.7 195 65.1
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 7.5e-64 247.7 195 65.6
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 1.7e-63 246.5 195 66.2
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 2.2e-63 246.1 186 67.7
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 2.2e-63 246.1 197 65.5
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 2.9e-63 245.7 196 67.3
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 2.9e-63 245.7 195 65.1
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 4.9e-63 245.0 195 65.1
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 4.9e-63 245.0 197 65.0
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 4.9e-63 245.0 195 62.1
CAN.G101.16 Capsicum annuum HOM05D004092 ORTHO05D005448 6.4e-63 244.6 195 65.1
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 6.4e-63 244.6 197 65.5
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 6.4e-63 244.6 197 65.5
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 6.4e-63 244.6 197 65.5
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 8.3e-63 244.2 195 64.6
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 1.1e-62 243.8 195 64.1
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 1.1e-62 243.8 196 64.8
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 1.4e-62 243.4 194 64.9
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 1.4e-62 243.4 195 64.1
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 1.9e-62 243.0 195 63.1
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 1.9e-62 243.0 195 65.6
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 3.2e-62 242.3 195 64.6
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 3.2e-62 242.3 195 63.6
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 3.2e-62 242.3 195 63.6
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 3.2e-62 242.3 195 63.1
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 5.4e-62 241.5 196 64.8
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 5.4e-62 241.5 196 64.3
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 5.4e-62 241.5 195 63.6
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 9.2e-62 240.7 195 65.1
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 9.2e-62 240.7 195 62.6
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 9.2e-62 240.7 195 63.6
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 1.2e-61 240.4 195 61.5
Cpa.g.sc4.30 Carica papaya HOM05D004092 ORTHO05D005448 2.1e-61 239.6 179 68.2
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 2.7e-61 239.2 182 63.2
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 2.7e-61 239.2 195 64.6
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 2.7e-61 239.2 193 63.2
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 3.5e-61 238.8 195 64.1
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 3.5e-61 238.8 195 64.6
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 7.8e-61 237.7 195 60.5
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 1.3e-60 236.9 195 64.1
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 1.7e-60 236.5 195 62.6
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 1.7e-60 236.5 196 65.8
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.0e-60 235.7 196 65.8
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.0e-60 235.7 196 65.8
Phvul.L001940 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.0e-60 235.7 196 65.8
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 8.6e-60 234.2 195 60.5
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 8.6e-60 234.2 195 65.1
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 8.6e-60 234.2 179 65.4
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 1.1e-59 233.8 195 61.0
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 1.1e-59 233.8 195 62.6
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 1.5e-59 233.4 195 61.0
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 1.5e-59 233.4 196 63.3
BcaNung04898 Brassica carinata HOM05D004092 ORTHO05D005448 1.9e-59 233.0 195 61.5
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 1.9e-59 233.0 195 63.1
BcaC08g47477 Brassica carinata HOM05D004092 ORTHO05D005448 3.3e-59 232.3 195 61.5
C06p53020 Brassica napus HOM05D004092 ORTHO05D005448 3.3e-59 232.3 195 61.5
BolC6t40319H Brassica oleracea HOM05D004092 ORTHO05D005448 3.3e-59 232.3 195 61.5
A07p44270 Brassica napus HOM05D004092 ORTHO05D005448 4.3e-59 231.9 195 61.5
BraA07t31936Z Brassica rapa HOM05D004092 ORTHO05D005448 4.3e-59 231.9 195 61.5
CARHR072800 Cardamine hirsuta HOM05D004092 ORTHO05D005448 4.3e-59 231.9 195 62.1
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 4.3e-59 231.9 196 63.3
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 5.6e-59 231.5 195 63.1
AT1G79150 Arabidopsis thaliana HOM05D004092 ORTHO05D005448 7.3e-59 231.1 195 61.0
Sp5g34210 Schrenkiella parvula HOM05D004092 ORTHO05D005448 7.3e-59 231.1 195 60.5
AL2G39620 Arabidopsis lyrata HOM05D004092 ORTHO05D005448 1.2e-58 230.3 195 62.1
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 1.2e-58 230.3 196 62.8
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 2.1e-58 229.6 195 63.6
Carub.0002s2602 Capsella rubella HOM05D004092 ORTHO05D005448 2.1e-58 229.6 195 61.5
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 2.1e-58 229.6 195 61.0
BcaB02g08669 Brassica carinata HOM05D004092 ORTHO05D005448 2.8e-58 229.2 195 62.1
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 2.8e-58 229.2 195 59.5
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 2.8e-58 229.2 195 63.1
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 2.8e-58 229.2 196 62.8
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 3.6e-58 228.8 195 60.0
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 2.4e-57 226.1 195 63.1
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 3.1e-57 225.7 179 63.7
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 8.9e-57 224.2 195 62.1
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 8.9e-57 224.2 195 61.5
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 2.0e-56 223.0 179 62.0
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 9.9e-56 220.7 195 57.4
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 3.8e-55 218.8 217 54.8
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 4.9e-55 218.4 179 62.0
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 8.4e-55 217.6 189 59.8
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 1.1e-54 217.2 189 59.8
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 2.4e-54 216.1 200 59.5
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 9.2e-54 214.2 209 56.5
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 1.6e-53 213.4 195 57.4
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 7.8e-53 211.1 197 57.9
SEGI_30171 Sequoiadendron giganteum HOM05D004092 ORTHO05D005448 1.9e-51 206.5 170 60.6
Haze_01706 Corylus avellana HOM05D004092 ORTHO05D005448 1.6e-50 203.4 162 65.4
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 3.6e-50 202.2 162 64.2
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 1.1e-49 200.7 162 63.0
Zm00001eb020130 Zea mays HOM05D004092 ORTHO05D005448 2.4e-49 199.5 184 59.2
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 1.5e-48 196.8 149 63.8
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 2.6e-48 196.1 162 61.1
Os06g0498500 Oryza sativa ssp. japonica HOM05D004092 ORTHO05D005448 3.8e-47 192.2 198 54.0
Sopen00g013080 Solanum pennellii HOM05D004092 ORTHO05D005448 4.5e-40 168.7 109 77.1
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis HOM05D004092 ORTHO05D005448 5.8e-40 168.3 174 51.1
Pp3c3_9760 Physcomitrium patens HOM05D004092 ORTHO05D005448 8.4e-39 164.5 156 53.2
unitig_32.g11084 Utricularia gibba HOM05D004092 ORTHO05D005448 1.2e-37 160.6 143 57.3
Thhalv10018125m.g Eutrema salsugineum HOM05D004092 ORTHO05D005448 2.1e-37 159.8 109 73.4
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 3.1e-33 146.0 159 48.4
SMO169G0313 Selaginella moellendorffii HOM05D004092 ORTHO05D005448 2.0e-32 143.3 161 49.1
CBR_g30814 Chara braunii HOM05D004092 ORTHO05D005448 9.3e-30 134.4 185 39.5
Phvul.011G073301 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.9e-28 129.0 118 58.5
Psat1g207400 Pisum sativum HOM05D004092 ORTHO05D005448 1.4e-25 120.6 171 47.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-24 117.5 169 42.6
Lsat_1_v5_gn_2_21921 Lactuca sativa HOM05D004092 ORTHO05D005448 1.1e-22 110.9 77 67.5
Cre16.g659600 Chlamydomonas reinhardtii HOM05D004092 ORTHO05D005448 5.1e-12 75.5 133 36.1
Sopen00g012990 Solanum pennellii HOM05D004092 ORTHO05D005448 1.1e-11 74.3 84 44.0
MCO10G157 Micromonas commoda HOM05D004092 ORTHO05D005448 1.4e-09 67.4 174 31.6
ECA232G3953 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.8e-09 67.0 72 45.8
Cfa024410 Carpinus fangiana HOM05D004142 ORTHO05D005411 4.2e-06 55.8 146 26.0


User provided reference genes

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