Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20956 Sapria himalayana HOM05D025004 ORTHO05D023835 1.5e-50 202.6 106 100.0
EL10Ac8g19436 Beta vulgaris HOM05D000002 ORTHO05D000001 4.1e-16 88.2 105 45.7
SHI28827 Sapria himalayana HOM05D025004 ORTHO05D023835 1.7e-14 82.8 111 47.7
SHI17337 Sapria himalayana HOM05D025004 ORTHO05D370807 4.3e-13 78.2 66 66.7
EL10Ac1g01502 Beta vulgaris HOM05D000002 ORTHO05D000001 7.3e-13 77.4 101 42.6
SHI11847 Sapria himalayana HOM05D025004 ORTHO05D023835 2.1e-12 75.9 79 57.0
SHI10429 Sapria himalayana HOM05D025004 ORTHO05D023835 3.6e-12 75.1 60 61.7
PSO675G3439 Papaver somniferum HOM05D000002 ORTHO05D000001 9.9e-10 67.0 106 41.5
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-09 66.6 92 40.2
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-09 65.5 92 39.1
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-09 64.3 94 39.4
Dinv24351 Davidia involucrata HOM05D000097 ORTHO05D000041 8.4e-09 63.9 104 36.5
A03p13150 Brassica napus HOM05D000002 ORTHO05D000001 1.1e-08 63.5 105 37.1
BraA03t10626Z Brassica rapa HOM05D000002 ORTHO05D000001 1.1e-08 63.5 105 37.1
C03p15380 Brassica napus HOM05D000002 ORTHO05D000001 1.9e-08 62.8 105 36.2
C03p15440 Brassica napus HOM05D000002 ORTHO05D000001 1.9e-08 62.8 105 36.2
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-08 62.8 92 37.0
CiPaw.07G043100 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.9e-08 62.8 91 36.3
SHI23807 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-08 62.8 93 36.6
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 1.9e-08 62.8 89 41.6
BolC3t13979H Brassica oleracea HOM05D000002 ORTHO05D000001 2.4e-08 62.4 105 36.2
Thhalv10028209m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 2.4e-08 62.4 92 37.0
PSO151G0096 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-08 62.4 102 37.3
SHI10120 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-08 62.0 93 34.4
SHI31522 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-08 62.0 93 32.3
Prupe.1G219500 Prunus persica HOM05D000002 ORTHO05D000001 4.1e-08 61.6 95 34.7
SEGI_09407 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.1e-08 61.6 106 36.8
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 61.2 93 36.6
SHI10423 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 61.2 93 34.4
SHI26423 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 61.2 93 36.6
RcHm_v2.0_Chr5g0080061 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-08 60.8 106 36.8
EL10Ac5g11206 Beta vulgaris HOM05D000002 ORTHO05D000001 9.2e-08 60.5 92 39.1
PSO675G9344 Papaver somniferum HOM05D000002 ORTHO05D000001 9.2e-08 60.5 105 37.1
SHI16905 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-08 60.5 93 36.6
SHI24209 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-08 60.5 93 35.5
Dinv25331 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 104 35.6
SHI27162 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.1 105 33.3
SHI30439 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.1 93 35.5
SHI00860 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 93 35.5
SHI04496 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 93 35.5
SHI05161 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 93 31.2
SHI07459 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 93 35.5
SHI08986 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 57 57.9
Sopen08g006540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 59.7 103 34.0
SHI20056 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 59.3 93 32.3
CiPaw.04G174800 Carya illinoinensis HOM05D000002 ORTHO05D000001 2.7e-07 58.9 95 36.8
SHI14684 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 93 35.5
SHI21288 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 93 34.4
SHI27059 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 93 32.3
A04p14970 Brassica napus HOM05D000002 ORTHO05D000001 3.5e-07 58.5 94 35.1
SHI12349 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.5 93 35.5
SHI32552 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.5 93 32.3
Atru.chr3.4253 Acer truncatum HOM05D000264 ORTHO05D000152 4.6e-07 58.2 101 35.6
CSS0007974 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000001 4.6e-07 58.2 94 35.1
SHI14044 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-07 58.2 93 36.6
SHI02145 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-07 57.8 93 34.4
SHI23402 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-07 57.8 93 32.3
SHI28896 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-07 57.4 93 34.4
SHI29707 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-07 57.4 93 31.2
CSS0004918 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.0e-06 57.0 91 34.1
CSS0005833 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000001 1.0e-06 57.0 91 34.1
Duzib041G0290 Durio zibethinus HOM05D000002 ORTHO05D000001 1.0e-06 57.0 95 37.9
Duzib212G0395 Durio zibethinus HOM05D000002 ORTHO05D000001 1.0e-06 57.0 92 37.0
ECA232G3865 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.0 94 38.3
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.0 94 37.2
MD03G1006900 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-06 57.0 92 35.9
SHI20414 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.0 93 34.4
SHI02688 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 93 34.4
SHI05308 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 93 33.3
SHI22731 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 93 34.4
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 94 38.3
Potri.011G016400 Populus trichocarpa HOM05D000097 ORTHO05D000041 2.3e-06 55.8 95 37.9
Duzib128G0886 Durio zibethinus HOM05D000002 ORTHO05D000001 3.0e-06 55.5 92 37.0
ECA240G3973 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 55.5 94 39.4
SHI00124 Sapria himalayana HOM05D004819 ORTHO05D005654 3.0e-06 55.5 99 34.3
SHI22010 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.5 91 34.1
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.5 93 35.5
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.5 93 35.5
Thhalv10015660m.g Eutrema salsugineum HOM05D035058 ORTHO05D000001 3.9e-06 55.1 93 38.7
HanXRQChr02g0049901 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-06 55.1 94 36.2
Duzib084G1319 Durio zibethinus HOM05D000002 ORTHO05D000001 5.1e-06 54.7 95 36.8
ECA233G0875 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-06 54.7 106 34.9
ECA236G1983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-06 54.7 94 39.4
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-06 54.3 95 32.6
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-06 54.3 105 34.3
SHI31098 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-06 54.3 92 33.7
CsaV3_3G020670 Cucumis sativus L. HOM05D000002 ORTHO05D000001 8.6e-06 53.9 95 33.7
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-06 53.9 97 40.2
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-06 53.9 97 40.2
FvH4_7g33701 Fragaria vesca HOM05D000002 ORTHO05D000001 8.6e-06 53.9 105 37.1
Thecc.05G264300 Theobroma cacao HOM05D000002 ORTHO05D000001 8.6e-06 53.9 106 34.0


User provided reference genes

Program Settings