Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20339 Sapria himalayana HOM05D000361 ORTHO05D008190 1.2e-106 389.8 193 100.0
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 2.0e-48 196.4 159 60.4
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 3.7e-47 192.2 159 58.5
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 4.8e-47 191.8 158 58.9
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 1.4e-46 190.3 159 57.9
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 3.1e-46 189.1 162 58.0
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 7.0e-46 188.0 158 56.3
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 7.0e-46 188.0 158 56.3
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 9.1e-46 187.6 158 56.3
QL11p022907 Quercus lobata HOM05D000361 ORTHO05D008190 9.1e-46 187.6 159 60.4
MELO3C018619.2 Cucumis melo HOM05D000361 ORTHO05D008190 1.2e-45 187.2 156 59.6
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 1.2e-45 187.2 156 59.6
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 1.6e-45 186.8 160 60.0
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 5.9e-45 184.9 158 58.9
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 1.0e-44 184.1 172 55.2
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 1.3e-44 183.7 157 56.1
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 1.7e-44 183.3 156 59.0
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 2.2e-44 183.0 157 56.7
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 3.8e-44 182.2 158 55.7
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 5.0e-44 181.8 154 56.5
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 5.0e-44 181.8 159 54.1
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 6.5e-44 181.4 156 59.0
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 8.5e-44 181.0 158 55.7
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 1.1e-43 180.6 158 58.9
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.1e-43 180.6 150 60.7
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.1e-43 180.6 150 61.3
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.1e-43 180.6 150 60.7
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 1.9e-43 179.9 157 54.8
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 1.9e-43 179.9 157 54.8
Nitab4.5_0003959g0050 Nicotiana tabacum HOM05D000361 ORTHO05D008190 2.5e-43 179.5 157 54.8
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 4.2e-43 178.7 158 57.0
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 5.5e-43 178.3 158 57.0
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 5.5e-43 178.3 154 55.2
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 5.5e-43 178.3 159 56.0
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 7.2e-43 177.9 158 56.3
Solyc01g105520.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 1.2e-42 177.2 154 54.5
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 1.6e-42 176.8 150 60.0
MBI02_g33224_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008190 2.1e-42 176.4 155 57.4
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 3.6e-42 175.6 155 54.8
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 4.7e-42 175.3 156 57.1
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 1.0e-41 174.1 154 53.9
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 2.3e-41 172.9 158 55.7
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 2.3e-41 172.9 158 55.1
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 4.0e-41 172.2 157 52.2
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 5.2e-41 171.8 158 53.2
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 1.2e-40 170.6 155 54.2
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 2.0e-40 169.9 158 55.1
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 2.6e-40 169.5 158 53.8
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 3.4e-40 169.1 158 54.4
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 3.4e-40 169.1 149 57.0
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 5.7e-40 168.3 158 54.4
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 9.8e-40 167.5 160 53.1
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 1.7e-39 166.8 179 49.7
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 1.7e-39 166.8 158 54.4
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 1.7e-39 166.8 158 54.4
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 1.7e-39 166.8 158 54.4
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 3.7e-39 165.6 118 66.1
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 3.7e-39 165.6 154 56.5
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 6.3e-39 164.9 153 53.6
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 6.3e-39 164.9 176 48.3
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 6.3e-39 164.9 154 51.9
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 8.3e-39 164.5 159 53.5
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 1.8e-38 163.3 153 52.9
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 7.0e-38 161.4 156 51.3
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 2.7e-37 159.5 164 48.2
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 7.7e-37 157.9 156 53.2
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 2.9e-36 156.0 149 53.0
VMungo0540G2310 Vigna mungo HOM05D000361 ORTHO05D008190 6.6e-36 154.8 158 51.9
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 8.6e-36 154.5 149 53.0
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 1.1e-35 154.1 154 50.6
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 1.9e-35 153.3 153 50.3
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 2.5e-35 152.9 153 50.3
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 3.3e-35 152.5 147 53.1
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 7.2e-35 151.4 159 51.6
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 7.2e-35 151.4 196 43.9
HPP92_004763 Vanilla planifolia HOM05D000361 ORTHO05D008190 2.1e-34 149.8 153 51.6
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 2.3e-33 146.4 121 59.5
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 3.0e-33 146.0 155 49.0
FAN20G1792 Fragaria x ananassa HOM05D000361 ORTHO05D008190 4.0e-33 145.6 167 49.1
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 7.5e-32 141.4 153 47.1
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 1.7e-31 140.2 170 43.5
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 2.2e-31 139.8 172 43.0
Eucgr.I02634 Eucalyptus grandis HOM05D000361 ORTHO05D008190 2.4e-30 136.3 149 50.3
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 7.0e-30 134.8 172 43.0
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 8.6e-28 127.9 77 75.3
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 8.6e-28 127.9 150 46.7
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 2.1e-26 123.2 117 53.8
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 6.1e-26 121.7 152 46.1
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 8.0e-26 121.3 152 43.4
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 8.0e-26 121.3 152 43.4
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 2.6e-24 116.3 80 65.0
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 7.5e-24 114.8 166 40.4
AagrBONN_evm.TU.Sc2ySwM_228.3455 Anthoceros agrestis HOM05D000361 ORTHO05D008190 5.4e-22 108.6 155 36.1
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 6.0e-21 105.1 121 43.8
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 1.3e-20 104.0 149 38.9
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 5.6e-19 98.6 81 63.0
Hma1.2p1_0784F.1_g217170 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 9.5e-19 97.8 64 76.6
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 9.5e-19 97.8 64 76.6
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 2.1e-18 96.7 80 56.2
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 3.1e-17 92.8 149 34.2
CBR_g50446 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-17 92.4 182 30.2
Actinidia38072 Actinidia chinensis HOM05D000361 ORTHO05D030930 2.2e-15 86.7 114 43.9
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 4.1e-14 82.4 62 61.3
Actinidia38075 Actinidia chinensis HOM05D000361 ORTHO05D030930 7.1e-14 81.6 97 44.3
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 1.9e-11 73.6 46 73.9
SMO356G0083 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 4.1e-06 55.8 37 64.9


User provided reference genes

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