Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20332 Sapria himalayana HOM05D000361 ORTHO05D008190 3.0e-54 214.9 110 100.0
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 2.0e-21 105.9 97 61.9
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 4.9e-20 101.3 61 78.7
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 5.4e-19 97.8 54 87.0
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 9.2e-19 97.1 57 80.7
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 9.2e-19 97.1 61 78.7
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 1.6e-18 96.3 55 83.6
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 1.6e-18 96.3 55 83.6
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 2.7e-18 95.5 56 82.1
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 3.5e-18 95.1 54 85.2
Cpa.g.c31478.2 Carica papaya HOM05D000361 ORTHO05D008190 3.5e-18 95.1 56 83.9
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 7.8e-18 94.0 59 78.0
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 1.0e-17 93.6 97 57.7
Eucgr.I02633 Eucalyptus grandis HOM05D000361 ORTHO05D008190 1.7e-17 92.8 56 80.4
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 3.0e-17 92.0 54 81.5
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 3.9e-17 91.7 54 79.6
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 3.9e-17 91.7 57 75.4
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 6.6e-17 90.9 97 55.7
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 1.5e-16 89.7 54 79.6
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 1.5e-16 89.7 97 55.7
GSVIVG01022626001 Vitis vinifera HOM05D000361 ORTHO05D008190 1.5e-16 89.7 54 81.5
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.9e-16 89.4 52 82.7
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 2.5e-16 89.0 97 54.6
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 2.5e-16 89.0 51 84.3
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 2.5e-16 89.0 56 76.8
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 2.5e-16 89.0 52 80.8
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 3.3e-16 88.6 107 50.5
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 3.3e-16 88.6 97 55.7
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 3.3e-16 88.6 51 84.3
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 4.3e-16 88.2 51 82.4
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 4.3e-16 88.2 54 79.6
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 4.3e-16 88.2 97 54.6
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 4.3e-16 88.2 51 86.3
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 4.3e-16 88.2 97 54.6
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 4.3e-16 88.2 98 54.1
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 5.6e-16 87.8 51 84.3
HPP92_004759 Vanilla planifolia HOM05D000361 ORTHO05D008190 5.6e-16 87.8 100 54.0
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 7.3e-16 87.4 59 76.3
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 7.3e-16 87.4 107 50.5
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 7.3e-16 87.4 106 50.0
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 7.3e-16 87.4 51 82.4
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 7.3e-16 87.4 79 62.0
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 9.6e-16 87.0 97 53.6
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 9.6e-16 87.0 97 53.6
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 9.6e-16 87.0 51 84.3
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 9.6e-16 87.0 51 82.4
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 9.6e-16 87.0 51 80.4
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 82.4
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 82.4
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 82.4
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 82.4
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 84.3
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 1.2e-15 86.7 51 84.3
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 80.4
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 80.4
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 84.3
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 80.4
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 82.4
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 1.6e-15 86.3 69 63.8
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 80.4
GSVIVG01022621001 Vitis vinifera HOM05D000361 ORTHO05D008190 1.6e-15 86.3 51 82.4
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 80.4
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 82.4
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 82.4
FAN20G1792 Fragaria x ananassa HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 82.4
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 80.4
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 2.1e-15 85.9 51 80.4
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 2.8e-15 85.5 97 52.6
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 2.8e-15 85.5 51 80.4
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 3.6e-15 85.1 51 80.4
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 3.6e-15 85.1 50 82.0
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 3.6e-15 85.1 51 78.4
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 4.7e-15 84.7 51 78.4
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 4.7e-15 84.7 77 59.7
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 4.7e-15 84.7 97 52.6
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 4.7e-15 84.7 97 52.6
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 4.7e-15 84.7 97 52.6
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 4.7e-15 84.7 97 52.6
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 4.7e-15 84.7 51 80.4
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 4.7e-15 84.7 51 80.4
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 4.7e-15 84.7 51 80.4
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 4.7e-15 84.7 51 80.4
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 6.2e-15 84.3 51 78.4
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 8.1e-15 84.0 97 51.5
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 1.8e-14 82.8 51 78.4
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 2.4e-14 82.4 51 78.4
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 3.1e-14 82.0 51 78.4
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 6.9e-14 80.9 51 80.4
Nitab4.5_0003959g0080 Nicotiana tabacum HOM05D000361 ORTHO05D008190 2.0e-13 79.3 48 79.2
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 1.7e-12 76.3 51 68.6
Solyc01g105530.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 2.2e-12 75.9 46 78.3
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 4.9e-12 74.7 51 68.6
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 8.4e-12 73.9 51 64.7
SHI53582 Sapria himalayana HOM05D000001 ORTHO05D029797 1.1e-11 73.6 36 91.7
Oeu007985.1 Olea europaea HOM05D000361 ORTHO05D008190 7.1e-11 70.9 53 67.9
CBR_g50446 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-10 68.2 60 58.3
AagrBONN_evm.TU.Sc2ySwM_228.3455 Anthoceros agrestis HOM05D000361 ORTHO05D008190 2.4e-06 55.8 51 51.0


User provided reference genes

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