Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20296 Sapria himalayana HOM05D003141 ORTHO05D003633 0.0e+00 2219.5 1142 100.0
Manes.01G081400 Manihot esculenta HOM05D003141 ORTHO05D003633 5.3e-125 453.4 1273 33.5
Atru.chr9.1295 Acer truncatum HOM05D003141 ORTHO05D003633 6.4e-123 446.4 1287 32.3
Sabra03G0047900 Salix brachista HOM05D003141 ORTHO05D003633 1.4e-122 445.3 1252 34.6
Potri.003G077600 Populus trichocarpa HOM05D003141 ORTHO05D003633 9.3e-122 442.6 1257 32.9
Potri.001G157300 Populus trichocarpa HOM05D003141 ORTHO05D003633 3.5e-121 440.7 1257 33.3
Ciclev10018443m.g Citrus clementina HOM05D003141 ORTHO05D003633 1.3e-120 438.7 1288 33.1
Manes.02G040600 Manihot esculenta HOM05D003141 ORTHO05D003633 2.1e-118 431.4 1274 32.7
QL12p011944 Quercus lobata HOM05D003141 ORTHO05D003633 8.2e-118 429.5 1280 32.3
Haze_07903 Corylus avellana HOM05D003141 ORTHO05D003633 1.0e-115 422.5 1286 32.6
ClCG10G002580 Citrullus lanatus HOM05D003141 ORTHO05D003633 1.2e-113 415.6 1236 31.7
TWI81G0497 Tripterygium wilfordii HOM05D003141 ORTHO05D003633 1.6e-113 415.2 1263 32.3
Sabra01G0134100 Salix brachista HOM05D003141 ORTHO05D003633 1.3e-112 412.1 1229 32.7
Thecc.03G249800 Theobroma cacao HOM05D003141 ORTHO05D003633 1.3e-112 412.1 1265 31.6
Dinv21645 Davidia involucrata HOM05D003141 ORTHO05D003633 2.3e-112 411.4 1263 31.9
CiPaw.11G080100 Carya illinoinensis HOM05D003141 ORTHO05D003633 1.1e-109 402.5 1272 32.1
Cpa.g.sc29.172 Carica papaya HOM05D003141 ORTHO05D003633 5.9e-108 396.7 1237 31.7
CsaV3_3G002610 Cucumis sativus L. HOM05D003141 ORTHO05D003633 6.1e-105 386.7 1242 31.1
Sed0019628 Sechium edule HOM05D003141 ORTHO05D003633 1.8e-104 385.2 1221 31.5
TWI15G0894 Tripterygium wilfordii HOM05D003141 ORTHO05D003633 5.1e-104 383.6 1262 32.3
Gohir.A11G027000 Gossypium hirsutum HOM05D003141 ORTHO05D003633 2.4e-101 374.8 1257 31.1
CiPaw.12G051500 Carya illinoinensis HOM05D003141 ORTHO05D003633 3.1e-101 374.4 1262 31.4
Gohir.D11G026200 Gossypium hirsutum HOM05D003141 ORTHO05D003633 5.0e-99 367.1 1262 31.0
MELO3C013931.2 Cucumis melo HOM05D003141 ORTHO05D003633 5.5e-98 363.6 1235 30.2
Glyma.01G208600 Glycine max HOM05D003141 ORTHO05D003633 3.6e-97 360.9 1218 30.5
Gorai.007G028500 Gossypium raimondii HOM05D003141 ORTHO05D003633 3.6e-97 360.9 1262 30.8
Duzib068G0714 Durio zibethinus HOM05D003141 ORTHO05D003633 4.7e-97 360.5 1286 29.6
CSS0047611 Camellia sinensis var. sinensis HOM05D003141 ORTHO05D003633 1.4e-96 359.0 1233 30.7
MD04G1062800 Malus domestica HOM05D003141 ORTHO05D003633 1.8e-96 358.6 1259 31.5
Medtr5g012780 Medicago truncatula HOM05D003141 ORTHO05D003633 2.3e-96 358.2 1235 30.4
Lj4g0011011 Lotus japonicus HOM05D003141 ORTHO05D003633 3.9e-96 357.5 1256 30.2
arahy.Tifrunner.gnm1.ann1.YK7683 Arachis hypogaea HOM05D003141 ORTHO05D003633 1.1e-95 355.9 1243 30.2
Lalb_Chr05g0214411 Lupinus albus HOM05D003141 ORTHO05D003633 1.5e-95 355.5 1244 29.3
Gohir.A12G216300 Gossypium hirsutum HOM05D003141 ORTHO05D003633 2.0e-95 355.1 1263 30.6
Prupe.5G068000 Prunus persica HOM05D003141 ORTHO05D003633 2.6e-95 354.8 1241 30.6
CANSAT21G0191 Cannabis sativa HOM05D003141 ORTHO05D003633 5.7e-95 353.6 1213 30.0
Phvul.002G057800 Phaseolus vulgaris HOM05D003141 ORTHO05D003633 2.8e-94 351.3 1207 30.2
Gorai.008G234500 Gossypium raimondii HOM05D003141 ORTHO05D003633 4.8e-94 350.5 1262 30.5
Lalb_Chr09g0330011 Lupinus albus HOM05D003141 ORTHO05D003633 1.1e-93 349.4 1228 30.9
VMungo1215G1426 Vigna mungo HOM05D003141 ORTHO05D003633 2.4e-93 348.2 1200 30.7
Glyma.11G033600 Glycine max HOM05D003141 ORTHO05D003633 3.1e-93 347.8 1216 30.1
Gohir.A08G169600 Gossypium hirsutum HOM05D003141 ORTHO05D003633 5.3e-93 347.1 1258 29.4
TAR629G2174 Trochodendron aralioides HOM05D003141 ORTHO05D003633 9.1e-93 346.3 1300 29.7
RcHm_v2.0_Chr7g0203541 Rosa chinensis HOM05D003141 ORTHO05D003633 1.5e-92 345.5 1245 30.6
Eucgr.D02089 Eucalyptus grandis HOM05D003141 ORTHO05D003633 2.0e-92 345.1 1239 30.3
Psat2g177640 Pisum sativum HOM05D003141 ORTHO05D003633 2.6e-92 344.7 1223 29.8
Duzib205G1689 Durio zibethinus HOM05D003141 ORTHO05D003633 7.7e-92 343.2 1275 30.0
Lj2g0024874 Lotus japonicus HOM05D003141 ORTHO05D003633 1.3e-91 342.4 1236 30.0
FAN04G0074 Fragaria x ananassa HOM05D003141 ORTHO05D003633 2.2e-91 341.7 1259 31.1
Gorai.004G197800 Gossypium raimondii HOM05D003141 ORTHO05D003633 2.1e-89 335.1 1259 29.1
TAR629G2689 Trochodendron aralioides HOM05D003141 ORTHO05D003633 3.6e-89 334.3 1318 29.0
Ca_24583_v3 Cicer arietinum L. HOM05D003141 ORTHO05D003633 6.1e-89 333.6 1248 29.9
TAR636G0976 Trochodendron aralioides HOM05D003141 ORTHO05D003633 6.1e-89 333.6 1283 29.3
CSS0046148 Camellia sinensis var. sinensis HOM05D003141 ORTHO05D003633 1.0e-88 332.8 1263 29.0
Hund14553 Selenicereus undatus HOM05D003141 ORTHO05D003633 2.3e-88 331.6 1268 28.4
Ca_21973_v3 Cicer arietinum L. HOM05D003141 ORTHO05D003633 5.2e-88 330.5 1258 30.6
MD06G1057100 Malus domestica HOM05D003141 ORTHO05D003633 1.1e-87 329.3 1271 29.7
Cc08_g12310 Coffea canephora HOM05D003141 ORTHO05D003633 1.5e-87 328.9 1290 28.9
Gohir.D08G187900 Gossypium hirsutum HOM05D003141 ORTHO05D003633 1.7e-86 325.5 1266 28.8
Dinv39155 Davidia involucrata HOM05D003141 ORTHO05D003633 4.8e-86 323.9 1233 29.9
Hund11601 Selenicereus undatus HOM05D003141 ORTHO05D003633 6.3e-86 323.6 1263 29.8
TAR375G1127 Trochodendron aralioides HOM05D003141 ORTHO05D003633 2.4e-85 321.6 1312 28.9
Gohir.D12G218900 Gossypium hirsutum HOM05D003141 ORTHO05D003633 5.3e-85 320.5 1040 31.3
THA.LOC104806728 Tarenaya hassleriana HOM05D003141 ORTHO05D003633 7.7e-84 316.6 1260 29.0
GSVIVG01004716001 Vitis vinifera HOM05D003141 ORTHO05D003633 3.8e-83 314.3 789 35.1
FvH4_5g19090 Fragaria vesca HOM05D003141 ORTHO05D003633 6.5e-83 313.5 1264 29.7
AUR62007092 Chenopodium quinoa HOM05D003141 ORTHO05D003633 1.1e-82 312.8 1236 28.0
Nn1g00964 Nelumbo nucifera HOM05D003141 ORTHO05D003633 1.1e-82 312.8 1284 27.3
FAN18G0989 Fragaria x ananassa HOM05D003141 ORTHO05D003633 1.5e-82 312.4 1264 29.7
Hma1.2p1_0316F.1_g123020 Hydrangea macrophylla HOM05D003141 ORTHO05D003633 1.5e-82 312.4 1163 29.4
Lj8A264T56 Lonicera japonica HOM05D003141 ORTHO05D003633 1.5e-82 312.4 1250 29.0
TAR374G0926 Trochodendron aralioides HOM05D003141 ORTHO05D003633 9.4e-82 309.7 1295 28.3
FAN13G0222 Fragaria x ananassa HOM05D003141 ORTHO05D003633 2.7e-81 308.1 1260 30.2
EL10Ac5g12387 Beta vulgaris HOM05D003141 ORTHO05D003633 1.0e-80 306.2 1201 27.9
Lsat_1_v5_gn_6_90740 Lactuca sativa HOM05D003141 ORTHO05D003633 1.4e-80 305.8 1191 29.1
arahy.Tifrunner.gnm1.ann1.ZLH3PG Arachis hypogaea HOM05D003141 ORTHO05D003633 3.0e-80 304.7 1223 28.4
Glyma.05G060300 Glycine max HOM05D003141 ORTHO05D003633 3.0e-80 304.7 1261 28.5
AUR62019955 Chenopodium quinoa HOM05D003141 ORTHO05D003633 4.0e-80 304.3 1267 27.2
FAN08G3437 Fragaria x ananassa HOM05D003141 ORTHO05D003633 1.5e-79 302.4 1237 30.2
PGR042G4011 Punica granatum HOM05D003141 ORTHO05D003633 2.0e-79 302.0 1239 28.8
VMungo0251G3034 Vigna mungo HOM05D003141 ORTHO05D003633 7.5e-79 300.1 1260 29.0
Medtr4g100800 Medicago truncatula HOM05D003141 ORTHO05D003633 1.7e-78 298.9 1343 28.1
Lalb_Chr05g0221221 Lupinus albus HOM05D003141 ORTHO05D003633 2.8e-78 298.1 1211 29.2
TPR.G37647 Trifolium pratense HOM05D003141 ORTHO05D003633 3.7e-78 297.7 1248 28.6
Psat4g072560 Pisum sativum HOM05D003141 ORTHO05D003633 4.8e-78 297.4 1245 28.6
QL12p011773 Quercus lobata HOM05D003141 ORTHO05D003633 6.3e-78 297.0 702 36.8
Phvul.003G221300 Phaseolus vulgaris HOM05D003141 ORTHO05D003633 1.4e-77 295.8 1273 29.1
Ah.12g053640 Amaranthus hybridus HOM05D003141 ORTHO05D003633 3.1e-77 294.7 1268 27.2
ECA240G2052 Erigeron canadensis HOM05D003141 ORTHO05D003633 5.3e-77 293.9 1212 28.1
Nn6g33922 Nelumbo nucifera HOM05D003141 ORTHO05D003633 2.0e-76 292.0 1279 28.5
HanXRQChr03g0087821 Helianthus annuus HOM05D003141 ORTHO05D003633 1.3e-75 289.3 1032 29.4
BcaNung00101 Brassica carinata HOM05D003141 ORTHO05D003633 5.5e-74 283.9 1197 29.4
Sc07g0009290 Simmondsia chinensis HOM05D003141 ORTHO05D003633 5.5e-74 283.9 1250 27.8
DCAR_027770 Daucus carota HOM05D003141 ORTHO05D003633 1.8e-72 278.9 1246 27.6
vmacro00195 Vaccinium macrocarpon HOM05D003141 ORTHO05D003633 4.0e-72 277.7 1281 28.1
Sopen08g027010 Solanum pennellii HOM05D003141 ORTHO05D003633 5.2e-72 277.3 1282 27.6
Solyc08g078530.4 Solanum lycopersicum HOM05D003141 ORTHO05D003633 1.2e-71 276.2 1280 27.4
Nitab4.5_0002289g0020 Nicotiana tabacum HOM05D003141 ORTHO05D003633 2.0e-71 275.4 1253 28.4
Aa31LG6G80 Aethionema arabicum HOM05D003141 ORTHO05D003633 3.4e-71 274.6 1210 27.7
BraA08t33289Z Brassica rapa HOM05D003141 ORTHO05D003633 7.5e-71 273.5 1213 28.5
Thhalv10024186m.g Eutrema salsugineum HOM05D003141 ORTHO05D003633 1.3e-70 272.7 1181 28.1
MBI04_g09516_MAGBIO Magnolia biondii HOM05D003141 ORTHO05D003633 6.3e-70 270.4 1234 28.0
CAN.G1058.41 Capsicum annuum HOM05D003141 ORTHO05D003633 5.4e-69 267.3 1277 26.8
Sp7g16850 Schrenkiella parvula HOM05D003141 ORTHO05D003633 1.2e-68 266.2 1212 28.0
Carub.0007s2408 Capsella rubella HOM05D003141 ORTHO05D003633 3.5e-68 264.6 1213 27.3
PGSC0003DMG400004819 Solanum tuberosum HOM05D003141 ORTHO05D003633 4.5e-68 264.2 1281 27.3
Sc22g0000930 Simmondsia chinensis HOM05D003141 ORTHO05D003633 5.9e-68 263.8 1236 28.2
AT4G17330 Arabidopsis thaliana HOM05D003141 ORTHO05D003633 2.5e-66 258.5 1204 26.7
Actinidia10833 Actinidia chinensis HOM05D003141 ORTHO05D003633 5.5e-66 257.3 954 29.2
AL7G37390 Arabidopsis lyrata HOM05D003141 ORTHO05D003633 1.6e-65 255.8 1254 27.2
ATR0317G002 Amborella trichopoda HOM05D003141 ORTHO05D003633 6.8e-64 250.4 1196 27.3
CDE04G1375 Ceratophyllum demersum HOM05D003141 ORTHO05D003633 4.4e-63 247.7 1100 27.6
Nitab4.5_0001381g0110 Nicotiana tabacum HOM05D003141 ORTHO05D003633 4.9e-62 244.2 1152 28.4
CDE02G1173 Ceratophyllum demersum HOM05D003141 ORTHO05D003633 6.3e-62 243.8 1219 26.6
MSTRG.25519 Avicennia marina HOM05D003141 ORTHO05D003633 5.4e-61 240.7 1283 27.4
DCAR_006836 Daucus carota HOM05D003141 ORTHO05D003633 7.0e-61 240.4 1263 26.4
vmacro14077 Vaccinium macrocarpon HOM05D003141 ORTHO05D003633 7.0e-61 240.4 815 31.2
BcaC07g38056 Brassica carinata HOM05D003141 ORTHO05D003633 1.2e-60 239.6 1035 28.1
Actinidia27472 Actinidia chinensis HOM05D003141 ORTHO05D003633 1.6e-60 239.2 853 30.8
Migut.A01111 Erythranthe guttata HOM05D003141 ORTHO05D003633 3.5e-60 238.0 1297 25.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 7.8e-60 236.9 1250 26.4
BcaC07g38061 Brassica carinata HOM05D003141 ORTHO05D003633 6.6e-59 233.8 961 29.7
MSTRG.12108 Avicennia marina HOM05D003141 ORTHO05D003633 8.6e-59 233.4 1285 26.9
PSO170G6315 Papaver somniferum HOM05D003141 ORTHO05D003633 4.3e-58 231.1 1190 27.3
PSO017G2158 Papaver somniferum HOM05D003141 ORTHO05D003633 5.6e-58 230.7 1197 27.4
HanXRQChr16g0510701 Helianthus annuus HOM05D003141 ORTHO05D003633 1.6e-57 229.2 1128 27.8
A08p13070 Brassica napus HOM05D003141 ORTHO05D003633 3.6e-57 228.0 916 29.6
BraA08t33284Z Brassica rapa HOM05D003141 ORTHO05D003633 4.7e-57 227.6 928 28.7
HanXRQChr17g0549311 Helianthus annuus HOM05D003141 ORTHO05D003633 8.0e-57 226.9 916 28.6
Lj2C219G10 Lonicera japonica HOM05D003141 ORTHO05D003633 3.4e-55 221.5 1225 25.6
Aqoxy7G00802 Aquilegia oxysepala HOM05D003141 ORTHO05D003633 1.4e-53 216.1 1187 26.5
SGA_v2.0_scaffold199G41175 Striga asiatica HOM05D003141 ORTHO05D003633 3.9e-51 208.0 977 26.7
vmacro22443 Vaccinium macrocarpon HOM05D003141 ORTHO05D003633 5.0e-51 207.6 785 30.2
vmacro10681 Vaccinium macrocarpon HOM05D003141 ORTHO05D003633 3.3e-50 204.9 780 29.6
SalBow6G4258 Salvia bowleyana HOM05D003141 ORTHO05D003633 3.6e-49 201.4 1185 24.8
SGA_v2.0_scaffold104G30161 Striga asiatica HOM05D003141 ORTHO05D003633 1.1e-48 199.9 1253 25.6
ECA233G3821 Erigeron canadensis HOM05D003141 ORTHO05D003633 5.8e-47 194.1 890 26.4
Zm00001eb391270 Zea mays HOM05D003141 ORTHO05D003633 2.3e-43 182.2 1168 24.8
unitig_744.g24473 Utricularia gibba HOM05D003141 ORTHO05D003633 8.6e-43 180.3 1204 25.7
GSVIVG01001959001 Vitis vinifera HOM05D003141 ORTHO05D003633 4.3e-42 177.9 387 35.1
Peaxi162Scf00209g00005 Petunia axillaris HOM05D003141 ORTHO05D003633 8.1e-41 173.7 1160 25.9
Oeu020432.4 Olea europaea HOM05D003141 ORTHO05D003633 1.1e-40 173.3 1228 24.0
Actinidia14419 Actinidia chinensis HOM05D003141 ORTHO05D003633 3.4e-39 168.3 821 26.6
COL.COLO4_37160 Corchorus olitorius HOM05D003141 ORTHO05D003633 2.9e-38 165.2 494 30.4
CARHR223940 Cardamine hirsuta HOM05D003141 ORTHO05D003633 3.2e-37 161.8 665 29.3
A08p13000 Brassica napus HOM05D003141 ORTHO05D003633 4.1e-37 161.4 612 28.6
Zm00001eb023270 Zea mays HOM05D003141 ORTHO05D003633 4.1e-37 161.4 1166 25.3
TPR.G18122 Trifolium pratense HOM05D003141 ORTHO05D003633 5.2e-32 144.4 565 28.5
BcaC06g33544 Brassica carinata HOM05D003141 ORTHO05D003633 1.5e-31 142.9 763 25.7
TPR.G40719 Trifolium pratense HOM05D003141 ORTHO05D003633 1.5e-31 142.9 299 36.8
BolC8t48454H Brassica oleracea HOM05D003141 ORTHO05D003633 3.5e-28 131.7 449 31.6
SEGI_11834 Sequoiadendron giganteum HOM05D003141 ORTHO05D003633 1.5e-26 126.3 585 31.3
A08p13010 Brassica napus HOM05D003141 ORTHO05D003633 4.0e-24 118.2 516 30.6
Os10g0559600 Oryza sativa ssp. japonica HOM05D003141 ORTHO05D003633 2.6e-23 115.5 487 27.9
HPP92_022419 Vanilla planifolia HOM05D003141 ORTHO05D003633 2.6e-23 115.5 504 27.2
Gohir.A12G216366 Gossypium hirsutum HOM05D003141 ORTHO05D003633 1.3e-22 113.2 230 39.6
unitig_21.g20317 Utricularia gibba HOM05D003141 ORTHO05D003633 1.7e-22 112.8 316 38.0
PSO017G3860 Papaver somniferum HOM05D003141 ORTHO05D003633 4.2e-21 108.2 206 41.3
ECA240G3943 Erigeron canadensis HOM05D003141 ORTHO05D003633 3.5e-20 105.1 232 36.6
SEGI_09106 Sequoiadendron giganteum HOM05D003141 ORTHO05D003633 1.3e-19 103.2 605 24.6
Oeu019602.2 Olea europaea HOM05D003141 ORTHO05D003633 4.5e-15 88.2 297 30.3
Gohir.A12G216333 Gossypium hirsutum HOM05D003141 ORTHO05D003633 7.1e-13 80.9 244 27.9
A08p13110 Brassica napus HOM05D001269 ORTHO05D001083 9.3e-13 80.5 208 39.4
SEGI_19130 Sequoiadendron giganteum HOM05D003141 ORTHO05D003633 9.3e-13 80.5 292 26.7
Actinidia28422 Actinidia chinensis HOM05D003141 ORTHO05D003633 2.7e-12 79.0 376 30.1
DCAR_004959 Daucus carota HOM05D003141 ORTHO05D003633 3.5e-12 78.6 222 36.5
SMO141G0126 Selaginella moellendorffii HOM05D003141 ORTHO05D003633 7.9e-12 77.4 387 27.9
HPP92_022418 Vanilla planifolia HOM05D003141 ORTHO05D003633 5.1e-11 74.7 451 25.7
PSO478G1324 Papaver somniferum HOM05D003141 ORTHO05D003633 9.6e-10 70.5 293 32.8
COL.COLO4_37161 Corchorus olitorius HOM05D003141 ORTHO05D003633 2.8e-09 68.9 124 40.3
Actinidia14420 Actinidia chinensis HOM05D003141 ORTHO05D003633 4.8e-09 68.2 251 32.3
Mapoly0052s0086 Marchantia polymorpha HOM05D003141 ORTHO05D003633 2.4e-08 65.9 599 23.5
AagrBONN_evm.TU.Sc2ySwM_369.388 Anthoceros agrestis HOM05D003141 ORTHO05D003633 4.5e-07 61.6 596 21.3


User provided reference genes

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