Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 1.9e-164 582.4 284 100.0
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.8e-32 142.9 271 36.2
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 4.2e-31 139.4 274 33.9
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 7.9e-30 135.2 297 32.7
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 6.7e-29 132.1 290 33.8
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 1.1e-26 124.8 291 31.3
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.2e-25 121.3 330 29.4
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 4.5e-25 119.4 276 31.5
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 1.7e-24 117.5 282 29.8
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 2.2e-24 117.1 262 30.9
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 2.2e-24 117.1 262 31.3
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.9e-23 114.0 334 28.7
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 2.5e-23 113.6 220 36.8
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 4.2e-23 112.8 257 33.1
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 7.2e-23 112.1 272 30.9
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.1e-22 110.5 270 28.5
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.1e-22 110.5 275 29.5
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 2.7e-22 110.2 294 31.0
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 7.9e-22 108.6 288 31.9
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 7.9e-22 108.6 288 30.2
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.3e-21 107.1 272 30.1
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.3e-21 107.1 299 28.1
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 3.0e-21 106.7 299 28.4
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 3.9e-21 106.3 313 29.1
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 1.1e-20 104.8 285 30.9
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.1e-20 104.8 259 28.6
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 1.1e-20 104.8 268 31.0
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.5e-20 104.4 257 35.0
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.5e-20 104.4 287 31.0
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 2.0e-20 104.0 255 30.6
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.6e-20 103.6 286 29.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 7.4e-20 102.1 257 34.6
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 7.4e-20 102.1 248 32.3
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.3e-19 101.3 287 29.6
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 2.4e-18 97.1 245 30.2
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 5.3e-18 95.9 255 27.5
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 9.1e-18 95.1 257 26.5
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 9.1e-18 95.1 250 30.4
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 2.0e-17 94.0 258 29.8
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.0e-17 94.0 265 29.1
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 3.4e-17 93.2 255 31.4
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 5.9e-17 92.4 295 27.8
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 7.7e-17 92.0 220 28.2
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.3e-16 91.3 220 28.2
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 2.2e-16 90.5 283 30.4
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 2.2e-16 90.5 283 30.4
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.2e-16 90.5 270 26.7
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 2.2e-16 90.5 248 31.0
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 5.0e-16 89.4 275 26.9
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 5.0e-16 89.4 275 26.9
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 8.5e-16 88.6 270 26.3
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 1.4e-15 87.8 250 31.2
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 1.9e-15 87.4 239 29.3
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 3.2e-15 86.7 248 31.9
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 3.2e-15 86.7 248 31.9
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 3.2e-15 86.7 248 31.9
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 3.2e-15 86.7 224 31.2
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 3.2e-15 86.7 251 31.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 7.2e-15 85.5 285 28.8
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 7.2e-15 85.5 295 25.1
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 1.2e-14 84.7 328 27.1
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.2e-14 84.7 236 32.2
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.6e-14 84.3 267 24.7
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 2.7e-14 83.6 257 28.8
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 4.7e-14 82.8 316 28.2
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 1.4e-13 81.3 250 29.2
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 5.2e-13 79.3 296 24.3
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 8.8e-13 78.6 242 29.3
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 1.1e-12 78.2 346 26.3
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 1.5e-12 77.8 249 29.3
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 1.5e-12 77.8 227 30.0
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.6e-12 77.0 223 27.4
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 3.3e-12 76.6 243 28.0
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 3.3e-12 76.6 240 29.2
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 4.4e-12 76.3 260 24.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 4.4e-12 76.3 262 27.9
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 5.7e-12 75.9 284 25.0
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 1.3e-11 74.7 257 28.0
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 2.2e-11 73.9 242 25.6
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 2.4e-10 70.5 254 27.6
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.4e-10 70.5 156 34.0
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.4e-10 70.5 149 29.5
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.0e-09 67.4 154 31.2
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 4.5e-09 66.2 316 25.3
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 5.9e-09 65.9 112 35.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 5.9e-09 65.9 230 27.0
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 1.0e-08 65.1 111 35.1
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 1.0e-08 65.1 118 37.3
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 1.7e-08 64.3 376 22.3
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 2.5e-07 60.5 219 29.2
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 7.2e-07 58.9 47 57.4
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 8.0e-06 55.5 149 24.2


User provided reference genes

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