Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 1.3e-63 246.1 120 100.0
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.0e-15 87.0 50 82.0
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 5.2e-15 84.7 50 82.0
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 6.8e-15 84.3 50 78.0
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 8.8e-15 84.0 50 80.0
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 1.2e-14 83.6 50 78.0
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-14 83.2 50 76.0
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.5e-14 83.2 50 78.0
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 2.0e-14 82.8 50 80.0
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 2.0e-14 82.8 50 78.0
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 2.6e-14 82.4 50 78.0
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 2.6e-14 82.4 127 44.9
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 5.7e-14 81.3 50 80.0
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.7e-14 81.3 50 76.0
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 7.5e-14 80.9 50 78.0
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 7.5e-14 80.9 50 78.0
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 9.8e-14 80.5 50 78.0
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 2.2e-13 79.3 51 74.5
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 2.8e-13 79.0 50 76.0
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 2.8e-13 79.0 50 76.0
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.8e-13 79.0 50 74.0
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.8e-13 79.0 50 74.0
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 2.8e-13 79.0 50 76.0
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 4.8e-13 78.2 50 76.0
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 4.8e-13 78.2 50 76.0
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 4.8e-13 78.2 50 76.0
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.8e-13 78.2 50 76.0
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 6.3e-13 77.8 50 76.0
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 3.1e-12 75.5 50 76.0
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 2.0e-11 72.8 42 81.0
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 4.5e-11 71.6 54 68.5
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 5.9e-11 71.2 51 68.6
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.0e-10 70.5 50 72.0
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 1.3e-10 70.1 44 70.5
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 1.7e-10 69.7 51 72.5
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 2.9e-10 68.9 40 80.0
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.6e-10 67.4 44 72.7
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.5e-09 66.6 39 79.5
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 1.5e-09 66.6 39 79.5
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 1.5e-09 66.6 39 79.5
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 1.9e-09 66.2 38 81.6
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 2.5e-09 65.9 85 47.1
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 2.5e-09 65.9 40 77.5
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 3.3e-09 65.5 38 81.6
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.2e-08 63.5 38 73.7
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 1.6e-08 63.2 59 61.0
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.1e-08 62.8 44 63.6
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 8.0e-08 60.8 39 74.4
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.0e-06 56.2 31 80.6
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 2.0e-06 56.2 46 58.7
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 4.4e-06 55.1 31 83.9


User provided reference genes

Program Settings