Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20133 Sapria himalayana HOM05D004537 ORTHO05D005492 4.7e-73 277.7 136 100.0
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 4.9e-30 134.8 95 74.7
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 7.1e-29 131.0 80 81.2
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 3.5e-28 128.6 80 80.0
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.8e-27 126.3 96 67.7
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 80.0
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 3.0e-27 125.6 80 78.8
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 8.7e-27 124.0 80 81.2
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 1.1e-26 123.6 80 78.8
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.1e-26 123.6 80 78.8
SHI27477 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-26 123.2 94 70.2
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 1.9e-26 122.9 80 78.8
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.5e-26 122.5 80 76.2
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 4.3e-26 121.7 79 78.5
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.7e-26 121.3 104 66.3
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 4.8e-25 118.2 106 63.2
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 6.5e-22 107.8 68 77.9
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.5e-22 107.5 68 76.5
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 7.2e-21 104.4 80 70.0
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 2.1e-20 102.8 67 79.1
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 6.1e-20 101.3 68 75.0
RcHm_v2.0_MTg0498791 Rosa chinensis HOM05D004537 ORTHO05D005492 2.3e-19 99.4 79 68.4
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 8.8e-19 97.4 70 74.3
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 1.4e-16 90.1 65 73.8
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 5.3e-16 88.2 66 72.7
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 7.7e-15 84.3 72 66.7
Lalb_Chr20g0115011 Lupinus albus HOM05D004537 ORTHO05D005492 1.1e-13 80.5 73 65.8
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 4.2e-13 78.6 83 59.0
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 2.7e-12 75.9 80 55.0
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 7.9e-12 74.3 44 84.1
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 6.7e-11 71.2 67 62.7
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 1.1e-10 70.5 52 67.3
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 2.6e-10 69.3 71 59.2
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 5.7e-10 68.2 131 35.9
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.7e-09 66.6 42 76.2
BraSC48t46325Z Brassica rapa HOM05D004537 ORTHO05D005492 2.8e-09 65.9 42 71.4
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 7.0e-08 61.2 41 75.6
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 9.1e-08 60.8 77 53.2
Haze_27101 Corylus avellana HOM05D004537 ORTHO05D005492 4.5e-07 58.5 110 38.2
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 7.7e-07 57.8 39 74.4
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.3e-06 57.0 54 63.0
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 1.3e-06 57.0 31 80.6
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 3.8e-06 55.5 39 71.8
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 8.5e-06 54.3 37 70.3


User provided reference genes

Program Settings