Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI20083 Sapria himalayana HOM05D004995 ORTHO05D006034 0.0e+00 1220.7 625 100.0
Sabra02G0160100 Salix brachista HOM05D004995 ORTHO05D006034 3.5e-38 164.1 725 27.6
Manes.01G226600 Manihot esculenta HOM05D004995 ORTHO05D006034 6.6e-37 159.8 484 29.8
Potri.002G197400 Populus trichocarpa HOM05D004995 ORTHO05D006034 8.6e-37 159.5 719 27.1
Potri.014G122400 Populus trichocarpa HOM05D004995 ORTHO05D006034 3.6e-35 154.1 788 26.4
Sabra14G0090800 Salix brachista HOM05D004995 ORTHO05D006034 4.9e-32 143.7 484 29.8
TWI75G0138 Tripterygium wilfordii HOM05D004995 ORTHO05D006034 6.4e-32 143.3 495 30.1
CSS0012776 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 2.4e-26 124.8 789 27.1
CSS0035665 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 4.0e-26 124.0 789 26.7
Actinidia21007 Actinidia chinensis HOM05D004995 ORTHO05D006034 5.2e-26 123.6 70 81.4
Thecc.01G311300 Theobroma cacao HOM05D004995 ORTHO05D006034 2.6e-25 121.3 732 26.2
Dinv10081 Davidia involucrata HOM05D004995 ORTHO05D006034 5.8e-25 120.2 763 24.8
Duzib138G1673 Durio zibethinus HOM05D004995 ORTHO05D006034 5.8e-25 120.2 66 83.3
Cc02_g27310 Coffea canephora HOM05D004995 ORTHO05D006034 1.3e-24 119.0 118 55.9
TAR633G0044 Trochodendron aralioides HOM05D004995 ORTHO05D006034 1.7e-24 118.6 432 32.4
Prupe.8G270500 Prunus persica HOM05D004995 ORTHO05D006034 1.4e-23 115.5 66 80.3
Medtr1g087290 Medicago truncatula HOM05D004995 ORTHO05D006034 1.9e-23 115.2 598 27.6
Oeu008461.1 Olea europaea HOM05D004995 ORTHO05D006034 3.2e-23 114.4 148 48.0
vmacro15117 Vaccinium macrocarpon HOM05D004995 ORTHO05D006034 3.2e-23 114.4 118 57.6
Cfa005817 Carpinus fangiana HOM05D004995 ORTHO05D006034 5.4e-23 113.6 800 25.2
Ca_10292_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 9.3e-23 112.8 598 27.1
Ca_30263_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 9.3e-23 112.8 598 27.1
DCAR_012367 Daucus carota HOM05D004995 ORTHO05D006034 9.3e-23 112.8 116 56.9
Psat6g162360 Pisum sativum HOM05D004995 ORTHO05D006034 1.2e-22 112.5 123 51.2
SGA_v2.0_scaffold376G50269 Striga asiatica HOM05D004995 ORTHO05D006034 1.2e-22 112.5 324 30.2
CANSAT25G2589 Cannabis sativa HOM05D004995 ORTHO05D006034 1.6e-22 112.1 62 83.9
Glyma.02G013500 Glycine max HOM05D004995 ORTHO05D006034 1.6e-22 112.1 210 41.9
CiPaw.07G116000 Carya illinoinensis HOM05D004995 ORTHO05D006034 2.1e-22 111.7 483 29.8
QL12p020317 Quercus lobata HOM05D004995 ORTHO05D006034 2.1e-22 111.7 181 40.9
RcHm_v2.0_Chr7g0241761 Rosa chinensis HOM05D004995 ORTHO05D006034 2.1e-22 111.7 112 52.7
Sopen06g004320 Solanum pennellii HOM05D004995 ORTHO05D006034 3.5e-22 110.9 184 40.8
Actinidia25841 Actinidia chinensis HOM05D004995 ORTHO05D006034 4.6e-22 110.5 321 31.8
COL.COLO4_23251 Corchorus olitorius HOM05D004995 ORTHO05D006034 4.6e-22 110.5 373 30.8
MELO3C015934.2 Cucumis melo HOM05D004995 ORTHO05D006034 4.6e-22 110.5 121 52.9
Dinv33107 Davidia involucrata HOM05D004995 ORTHO05D006034 7.8e-22 109.8 532 26.7
Lsat_1_v5_gn_8_165441 Lactuca sativa HOM05D004995 ORTHO05D006034 7.8e-22 109.8 124 54.0
Peaxi162Scf00058g03010 Petunia axillaris HOM05D004995 ORTHO05D006034 7.8e-22 109.8 66 74.2
GSVIVG01028102001 Vitis vinifera HOM05D004995 ORTHO05D006034 1.0e-21 109.4 104 55.8
Ciclev10024590m.g Citrus clementina HOM05D004995 ORTHO05D006034 1.7e-21 108.6 62 83.9
Lalb_Chr02g0146751 Lupinus albus HOM05D004995 ORTHO05D006034 1.7e-21 108.6 66 74.2
MD03G1296700 Malus domestica HOM05D004995 ORTHO05D006034 1.7e-21 108.6 124 50.8
MBI18_g28452_MAGBIO Magnolia biondii HOM05D004995 ORTHO05D006034 2.3e-21 108.2 118 49.2
Sc24g0003210 Simmondsia chinensis HOM05D004995 ORTHO05D006034 2.3e-21 108.2 355 31.8
Ah.11g049350 Amaranthus hybridus HOM05D004995 ORTHO05D006034 3.0e-21 107.8 133 45.9
Atru.chr5.1036 Acer truncatum HOM05D004995 ORTHO05D006034 3.9e-21 107.5 64 79.7
Gohir.A12G126200 Gossypium hirsutum HOM05D004995 ORTHO05D006034 3.9e-21 107.5 363 30.3
Rhsim01G0290000 Rhododendron simsii HOM05D004995 ORTHO05D006034 3.9e-21 107.5 561 29.2
BcaB01g02426 Brassica carinata HOM05D004995 ORTHO05D006034 5.1e-21 107.1 118 52.5
CsaV3_7G029870 Cucumis sativus L. HOM05D004995 ORTHO05D006034 5.1e-21 107.1 126 47.6
ECA236G3500 Erigeron canadensis HOM05D004995 ORTHO05D006034 6.6e-21 106.7 136 46.3
Phvul.007G215300 Phaseolus vulgaris HOM05D004995 ORTHO05D006034 6.6e-21 106.7 215 36.7
PSO170G6821 Papaver somniferum HOM05D004995 ORTHO05D006034 8.7e-21 106.3 58 82.8
Hund09619 Selenicereus undatus HOM05D004995 ORTHO05D006034 8.7e-21 106.3 95 55.8
CAN.G1280.22 Capsicum annuum HOM05D004995 ORTHO05D006034 1.1e-20 105.9 444 26.8
arahy.Tifrunner.gnm1.ann1.KJ11SU Arachis hypogaea HOM05D004995 ORTHO05D006034 1.5e-20 105.5 621 25.8
Lj1A19G23 Lonicera japonica HOM05D004995 ORTHO05D006034 1.5e-20 105.5 58 86.2
CAN.G362.42 Capsicum annuum HOM05D004995 ORTHO05D006034 3.3e-20 104.4 136 44.9
Sed0026389 Sechium edule HOM05D004995 ORTHO05D006034 3.3e-20 104.4 189 39.2
DCAR_005771 Daucus carota HOM05D004995 ORTHO05D006034 4.3e-20 104.0 62 74.2
Nitab4.5_0001301g0150 Nicotiana tabacum HOM05D004995 ORTHO05D006034 4.3e-20 104.0 177 40.7
TPR.G19766 Trifolium pratense HOM05D004995 ORTHO05D006034 4.3e-20 104.0 111 53.2
Haze_05025 Corylus avellana HOM05D004995 ORTHO05D006034 5.6e-20 103.6 591 25.4
Migut.D00092 Erythranthe guttata HOM05D004995 ORTHO05D006034 5.6e-20 103.6 144 45.1
MD11G1316200 Malus domestica HOM05D004995 ORTHO05D006034 5.6e-20 103.6 120 50.0
VMungo0720G1458 Vigna mungo HOM05D004995 ORTHO05D006034 5.6e-20 103.6 70 68.6
Lj5g0006877 Lotus japonicus HOM05D004995 ORTHO05D006034 7.3e-20 103.2 210 36.2
PSO357G0286 Papaver somniferum HOM05D004995 ORTHO05D006034 7.3e-20 103.2 107 51.4
Gorai.008G140900 Gossypium raimondii HOM05D004995 ORTHO05D006034 1.3e-19 102.4 366 30.6
Peaxi162Scf00001g10213 Petunia axillaris HOM05D004995 ORTHO05D006034 1.3e-19 102.4 251 35.9
Solyc06g009680.4 Solanum lycopersicum HOM05D004995 ORTHO05D006034 1.3e-19 102.4 462 26.0
Aqoxy5G04290 Aquilegia oxysepala HOM05D004995 ORTHO05D006034 1.6e-19 102.1 330 31.2
BcaC01g06775 Brassica carinata HOM05D004995 ORTHO05D006034 1.6e-19 102.1 113 53.1
Cpa.g.sc18.23 Carica papaya HOM05D004995 ORTHO05D006034 2.1e-19 101.7 778 24.8
PGR044G2031 Punica granatum HOM05D004995 ORTHO05D006034 2.1e-19 101.7 588 26.4
arahy.Tifrunner.gnm1.ann1.SI6M6S Arachis hypogaea HOM05D004995 ORTHO05D006034 6.2e-19 100.1 618 25.7
Nitab4.5_0006144g0040 Nicotiana tabacum HOM05D004995 ORTHO05D006034 6.2e-19 100.1 510 26.5
EL10As5g23507 Beta vulgaris HOM05D004995 ORTHO05D006034 1.1e-18 99.4 173 38.7
Haze_05021 Corylus avellana HOM05D004995 ORTHO05D006034 1.1e-18 99.4 582 25.6
Glyma.10G014100 Glycine max HOM05D004995 ORTHO05D006034 1.1e-18 99.4 322 30.7
Gohir.D12G129700 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.8e-18 98.6 359 30.4
PGSC0003DMG400009006 Solanum tuberosum HOM05D004995 ORTHO05D006034 1.8e-18 98.6 115 49.6
unitig_90.g27435 Utricularia gibba HOM05D004995 ORTHO05D006034 2.4e-18 98.2 57 75.4
HanXRQChr06g0167831 Helianthus annuus HOM05D004995 ORTHO05D006034 3.1e-18 97.8 465 27.1
BolC3t16092H Brassica oleracea HOM05D004995 ORTHO05D006034 4.0e-18 97.4 116 50.9
FAN04G1561 Fragaria x ananassa HOM05D004995 ORTHO05D006034 4.0e-18 97.4 369 30.1
AT4G02110 Arabidopsis thaliana HOM05D004995 ORTHO05D006034 9.0e-18 96.3 166 41.6
A03p31220 Brassica napus HOM05D004995 ORTHO05D006034 1.2e-17 95.9 143 44.1
FAN18G1671 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.2e-17 95.9 364 29.4
Os03g0304400 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 1.2e-17 95.9 62 66.1
Thhalv10028365m.g Eutrema salsugineum HOM05D004995 ORTHO05D006034 1.5e-17 95.5 128 46.1
C03p38070 Brassica napus HOM05D004995 ORTHO05D006034 2.6e-17 94.7 116 50.0
BraA03t12302Z Brassica rapa HOM05D004995 ORTHO05D006034 2.6e-17 94.7 308 29.9
Oeu047387.1 Olea europaea HOM05D004995 ORTHO05D006034 2.6e-17 94.7 445 26.7
CDE09G0507 Ceratophyllum demersum HOM05D004995 ORTHO05D006034 4.4e-17 94.0 200 33.5
FvH4_5g39450 Fragaria vesca HOM05D004995 ORTHO05D006034 5.8e-17 93.6 364 29.1
FAN08G3258 Fragaria x ananassa HOM05D004995 ORTHO05D006034 5.8e-17 93.6 366 29.0
FAN13G2181 Fragaria x ananassa HOM05D004995 ORTHO05D006034 5.8e-17 93.6 368 30.2
AL6G51110 Arabidopsis lyrata HOM05D004995 ORTHO05D006034 7.6e-17 93.2 238 34.0
Zm00001eb014460 Zea mays HOM05D004995 ORTHO05D006034 7.6e-17 93.2 118 44.1
Nitab4.5_0000363g0330 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.3e-16 92.4 514 25.7
HanXRQChr15g0464181 Helianthus annuus HOM05D004995 ORTHO05D006034 1.7e-16 92.0 468 27.1
SEGI_38340 Sequoiadendron giganteum HOM05D004995 ORTHO05D006034 1.7e-16 92.0 62 61.3
ATR0706G147 Amborella trichopoda HOM05D004995 ORTHO05D006034 2.2e-16 91.7 388 28.6
Nitab4.5_0013957g0010 Nicotiana tabacum HOM05D004995 ORTHO05D006034 2.2e-16 91.7 643 25.0
THA.LOC104825943 Tarenaya hassleriana HOM05D004995 ORTHO05D006034 6.4e-16 90.1 628 24.8
Carub.0006s3511 Capsella rubella HOM05D004995 ORTHO05D006034 1.1e-15 89.4 184 41.8
AUR62024673 Chenopodium quinoa HOM05D004995 ORTHO05D006034 1.1e-15 89.4 524 24.4
Os07g0689950 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 1.1e-15 89.4 119 47.9
CARHR250290 Cardamine hirsuta HOM05D004995 ORTHO05D006034 1.9e-15 88.6 379 30.1
Sp6g02000 Schrenkiella parvula HOM05D004995 ORTHO05D006034 3.2e-15 87.8 166 38.6
Nn3g21651 Nelumbo nucifera HOM05D004995 ORTHO05D006034 5.4e-15 87.0 529 25.7
Zm00001eb331400 Zea mays HOM05D004995 ORTHO05D006034 9.3e-15 86.3 95 46.3
Aa31LG5G1780 Aethionema arabicum HOM05D004995 ORTHO05D006034 1.6e-14 85.5 183 35.5
AUR62011830 Chenopodium quinoa HOM05D004995 ORTHO05D006034 6.0e-14 83.6 523 24.1
SMO367G0571 Selaginella moellendorffii HOM05D004995 ORTHO05D006034 9.9e-09 66.2 212 29.7
AagrBONN_evm.TU.Sc2ySwM_368.2357 Anthoceros agrestis HOM05D004995 ORTHO05D006034 9.3e-07 59.7 59 44.1


User provided reference genes

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