Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19993 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-39 166.0 79 100.0
SHI31736 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-29 132.1 92 73.9
SHI14625 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-28 129.0 92 72.8
SHI03258 Sapria himalayana HOM05D000030 ORTHO05D000009 4.6e-28 127.5 92 72.8
SHI14906 Sapria himalayana HOM05D000030 ORTHO05D000009 4.6e-28 127.5 92 71.7
SHI17057 Sapria himalayana HOM05D000030 ORTHO05D000009 1.0e-27 126.3 92 71.7
SHI16217 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-27 125.6 92 72.8
SHI35276 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-27 125.6 92 71.7
SHI30659 Sapria himalayana HOM05D000030 ORTHO05D000009 2.3e-27 125.2 92 70.7
SHI16608 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-27 124.8 92 70.7
SHI51692 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-26 122.9 92 70.7
SHI16775 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-26 122.5 92 69.6
SHI03637 Sapria himalayana HOM05D000030 ORTHO05D000031 2.4e-24 115.2 82 72.0
SHI24939 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-23 112.5 87 69.0
MD11G1111300 Malus domestica HOM05D000030 ORTHO05D000009 2.4e-16 88.6 93 50.5
SHI14292 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-15 85.9 46 87.0
SHI40305 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-15 85.5 62 71.0
MD00G1092100 Malus domestica HOM05D000030 ORTHO05D000009 1.7e-14 82.4 92 48.9
SHI48767 Sapria himalayana HOM05D000030 ORTHO05D000009 2.9e-14 81.6 46 80.4
SHI48573 Sapria himalayana HOM05D000030 ORTHO05D000009 4.9e-14 80.9 76 56.6
MD10G1273100 Malus domestica HOM05D000030 ORTHO05D000009 8.4e-14 80.1 92 45.7
RcHm_v2.0_Chr1g0315421 Rosa chinensis HOM05D000030 ORTHO05D000009 8.4e-14 80.1 92 43.5
SHI46430 Sapria himalayana HOM05D000030 ORTHO05D000009 1.4e-13 79.3 46 80.4
SHI17276 Sapria himalayana HOM05D000030 ORTHO05D000009 7.1e-13 77.0 77 57.1
COL.COLO4_19994 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.1e-12 75.5 91 41.8
FvH4_4g06653 Fragaria vesca HOM05D000030 ORTHO05D000009 2.7e-12 75.1 91 41.8
FvH4_7g14271 Fragaria vesca HOM05D000030 ORTHO05D000009 4.6e-12 74.3 92 43.5
Aqoxy5G03111 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 6.0e-12 73.9 92 41.3
FvH4_4g21074 Fragaria vesca HOM05D000030 ORTHO05D000009 7.9e-12 73.6 92 43.5
HanXRQChr17g0554281 Helianthus annuus HOM05D000030 ORTHO05D000009 1.3e-11 72.8 91 45.1
Rhsim01G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-11 72.8 91 44.0
ECA240G3204 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.8e-11 72.4 91 39.6
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 1.8e-11 72.4 91 40.7
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 1.8e-11 72.4 91 40.7
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 1.8e-11 72.4 91 40.7
Aqoxy1G03509 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 2.3e-11 72.0 92 41.3
Aqoxy7G02841 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 2.3e-11 72.0 92 41.3
Aqoxy1G02631 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 3.9e-11 71.2 92 41.3
RcHm_v2.0_Chr2g0138151 Rosa chinensis HOM05D000030 ORTHO05D000009 3.9e-11 71.2 92 41.3
SHI10401 Sapria himalayana HOM05D003674 ORTHO05D004226 3.9e-11 71.2 46 69.6
COL.COLO4_07717 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.1e-10 69.7 91 38.5
Thecc.06G002000 Theobroma cacao HOM05D000030 ORTHO05D000009 1.1e-10 69.7 91 39.6
Atru.chr3.1976 Acer truncatum HOM05D000030 ORTHO05D000031 3.3e-10 68.2 92 40.2
FvH4_5g24030 Fragaria vesca HOM05D000030 ORTHO05D000009 3.3e-10 68.2 92 40.2
CiPaw.03G210400 Carya illinoinensis HOM05D000030 ORTHO05D000009 4.3e-10 67.8 88 40.9
AUR62008567 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.6e-10 67.4 93 38.7
AUR62028297 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.6e-10 67.4 93 38.7
AUR62033000 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.6e-10 67.4 93 38.7
HanXRQChr12g0374831 Helianthus annuus HOM05D000030 ORTHO05D000009 1.3e-09 66.2 91 40.7
RcHm_v2.0_Chr4g0427661 Rosa chinensis HOM05D000030 ORTHO05D000009 1.3e-09 66.2 88 40.9
RcHm_v2.0_Chr1g0330231 Rosa chinensis HOM05D000030 ORTHO05D000031 1.6e-09 65.9 46 58.7
Aqoxy3G02406 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.1e-08 63.2 94 43.6
HPP92_023536 Vanilla planifolia HOM05D000030 ORTHO05D000009 1.4e-08 62.8 91 38.5
FvH4_6g47670 Fragaria vesca HOM05D000030 ORTHO05D000009 4.0e-08 61.2 46 54.3
PGR142G2060 Punica granatum HOM05D000030 ORTHO05D000009 6.9e-08 60.5 91 41.8
PGR044G2094 Punica granatum HOM05D000030 ORTHO05D000009 9.0e-08 60.1 91 40.7
PGR083G0765 Punica granatum HOM05D000030 ORTHO05D000009 9.0e-08 60.1 91 40.7
PGR102G1721 Punica granatum HOM05D000030 ORTHO05D000009 9.0e-08 60.1 91 40.7
Prupe.6G144800 Prunus persica HOM05D000030 ORTHO05D000009 1.2e-07 59.7 46 52.2
SHI11062 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-07 58.9 36 77.8
Ca_14817_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 5.8e-07 57.4 91 41.8
PGR031G0853 Punica granatum HOM05D000030 ORTHO05D000009 5.8e-07 57.4 91 40.7
SHI03114 Sapria himalayana HOM05D000030 ORTHO05D000009 5.8e-07 57.4 80 45.0
HanXRQChr10g0289591 Helianthus annuus HOM05D000030 ORTHO05D000009 1.3e-06 56.2 91 36.3
HanXRQChr11g0320711 Helianthus annuus HOM05D000030 ORTHO05D000009 1.3e-06 56.2 85 41.2
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 1.7e-06 55.8 93 36.6
SHI16275 Sapria himalayana HOM05D000030 ORTHO05D000031 1.7e-06 55.8 46 63.0
Hund11149 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.7e-06 55.8 91 37.4
Rhsim10G0103300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-06 55.1 93 36.6
TPR.G20432 Trifolium pratense HOM05D000030 ORTHO05D000009 2.9e-06 55.1 93 37.6
HanXRQChr03g0091701 Helianthus annuus HOM05D003237 ORTHO05D003631 4.9e-06 54.3 91 36.3
Hma1.2p1_0784F.1_g217330 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.9e-06 54.3 92 35.9
PSO017G1283 Papaver somniferum HOM05D000030 ORTHO05D000009 4.9e-06 54.3 93 35.5
PGR119G1248 Punica granatum HOM05D000030 ORTHO05D000009 6.4e-06 53.9 75 44.0
Hund01825 Selenicereus undatus HOM05D000030 ORTHO05D000009 6.4e-06 53.9 93 36.6
Hund12166 Selenicereus undatus HOM05D000030 ORTHO05D000009 6.4e-06 53.9 93 35.5
COL.COLO4_25807 Corchorus olitorius HOM05D000030 ORTHO05D019047 8.4e-06 53.5 73 37.0
COL.COLO4_32556 Corchorus olitorius HOM05D000030 ORTHO05D019047 8.4e-06 53.5 73 37.0


User provided reference genes

Program Settings