Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.2e-58 228.8 120 100.0
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.1e-36 156.8 112 75.0
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.5e-35 152.9 114 69.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 7.7e-35 150.6 114 70.2
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.7e-34 149.4 114 68.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.9e-34 148.7 114 67.5
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 5.0e-34 147.9 109 71.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.6e-32 141.7 112 62.5
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 4.7e-32 141.4 106 65.1
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 6.1e-32 141.0 111 62.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.0e-31 140.2 116 63.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.4e-31 139.8 113 66.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 6.7e-31 137.5 105 63.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.7e-31 137.5 115 63.5
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 8.8e-31 137.1 111 61.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.3e-30 135.2 114 64.9
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.3e-30 135.2 113 61.9
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 7.4e-30 134.0 109 63.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 7.4e-30 134.0 109 63.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.4e-30 134.0 109 63.3
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 9.7e-30 133.7 105 61.9
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 9.7e-30 133.7 105 61.9
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.7e-29 132.9 112 58.9
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.7e-29 131.7 105 61.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.7e-29 131.7 105 61.0
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.7e-29 131.7 116 59.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 4.8e-29 131.3 112 59.8
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 6.3e-29 131.0 105 60.0
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 6.3e-29 131.0 105 60.0
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.3e-29 131.0 113 64.6
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 8.2e-29 130.6 106 61.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.4e-28 129.8 101 62.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.1e-28 128.6 109 61.5
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.1e-28 128.3 111 62.2
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 5.3e-28 127.9 106 61.3
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 7.0e-28 127.5 106 61.3
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.2e-27 126.7 110 60.0
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.0e-27 125.9 106 59.4
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 3.5e-27 125.2 110 58.2
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 4.5e-27 124.8 112 57.1
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 4.5e-27 124.8 112 57.1
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 4.5e-27 124.8 112 57.1
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 7.7e-27 124.0 112 59.8
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 7.7e-27 124.0 109 58.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.3e-26 123.2 112 57.1
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.3e-26 123.2 112 57.1
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.3e-26 123.2 111 61.3
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-26 122.9 112 58.0
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-26 122.9 111 57.7
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.7e-26 122.9 112 56.2
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.7e-26 122.9 111 56.8
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.7e-26 122.9 113 57.5
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.2e-26 122.5 113 55.8
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.2e-26 122.5 112 58.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.9e-26 122.1 111 55.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.9e-26 122.1 113 59.3
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.9e-26 122.1 101 62.4
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 3.8e-26 121.7 112 58.0
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 3.8e-26 121.7 111 55.9
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 6.5e-26 120.9 110 59.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.1e-25 120.2 107 59.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.1e-25 120.2 109 56.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.5e-25 119.8 97 61.9
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.5e-25 119.8 98 62.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-25 119.4 101 58.4
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.9e-25 119.4 98 62.2
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.5e-25 119.0 95 61.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.5e-25 119.0 112 54.5
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 5.5e-25 117.9 109 56.9
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 5.5e-25 117.9 109 56.9
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.2e-24 116.7 111 51.4
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.6e-24 116.3 109 56.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.6e-24 116.3 90 70.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.7e-24 115.5 99 57.6
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.7e-24 115.5 113 54.9
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.7e-24 115.5 107 57.9
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 3.6e-24 115.2 107 57.9
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 4.7e-24 114.8 128 52.3
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 6.1e-24 114.4 100 56.0
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 6.1e-24 114.4 107 57.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 8.0e-24 114.0 109 56.9
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.4e-23 113.2 111 55.0
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.3e-23 112.5 114 55.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 4.0e-23 111.7 114 51.8
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 5.2e-23 111.3 81 66.7
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.2e-23 111.3 107 56.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 6.7e-23 110.9 111 54.1
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.0e-22 109.4 111 51.4
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.6e-22 109.0 99 55.6
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 9.7e-22 107.1 90 56.7
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.3e-21 106.7 100 51.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.3e-21 106.7 100 58.0
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.3e-21 106.7 95 54.7
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.7e-21 106.3 101 54.5
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.2e-21 105.9 107 53.3
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.8e-21 104.8 112 47.3
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 6.3e-21 104.4 94 51.1
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.3e-21 104.4 94 51.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 8.3e-21 104.0 85 57.6
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.1e-20 103.6 111 49.5
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.8e-20 102.8 100 51.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.4e-20 102.4 111 50.5
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.1e-20 101.7 98 55.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 5.3e-20 101.3 104 51.9
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 7.0e-20 100.9 94 56.4
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.6e-19 99.8 94 56.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 3.5e-19 98.6 88 50.0
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.3e-18 96.7 96 52.1
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.8e-18 95.1 111 50.5
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 5.5e-17 91.3 92 52.2
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-16 89.7 114 43.9
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.7e-16 89.0 110 46.4
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 8.0e-16 87.4 100 48.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.4e-15 86.7 65 64.6
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 4.0e-15 85.1 104 48.1
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 5.2e-15 84.7 67 58.2
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 6.8e-15 84.3 100 42.0
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.5e-14 83.2 65 66.2
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.1e-12 77.0 81 55.6
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.1e-12 75.5 72 56.9
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 9.1e-12 73.9 78 43.6
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 3.5e-11 72.0 85 44.7
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 4.7e-08 61.6 101 34.7
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.0e-06 56.2 78 38.5
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 9.8e-06 53.9 108 33.3


User provided reference genes

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