Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.4e-145 518.8 272 100.0
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.6e-75 287.0 276 61.6
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 5.9e-75 285.0 276 61.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 7.7e-75 284.6 273 62.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.5e-73 279.6 276 60.9
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 5.5e-73 278.5 275 60.4
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.7e-72 276.2 273 60.4
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.7e-72 275.4 267 61.4
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.4e-71 273.9 272 59.2
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.0e-70 270.0 278 57.6
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.2e-69 266.5 275 57.1
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 3.7e-69 265.8 287 56.1
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 1.1e-68 264.2 275 58.9
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 7.0e-68 261.5 248 62.9
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 9.2e-68 261.2 279 58.4
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.2e-67 260.8 290 54.5
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.6e-67 260.4 274 58.8
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.0e-67 260.0 274 58.4
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 4.5e-67 258.8 252 62.3
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 5.9e-67 258.5 272 57.7
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 7.7e-67 258.1 277 55.2
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.0e-66 257.7 257 59.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.8e-66 255.8 295 53.6
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 5.0e-66 255.4 295 53.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 8.6e-66 254.6 281 55.9
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.5e-65 253.8 282 53.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 2.5e-65 253.1 279 56.6
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.3e-65 252.3 293 53.2
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 5.6e-65 251.9 253 58.5
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 9.5e-65 251.1 254 58.3
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.8e-64 249.6 246 59.3
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 3.6e-64 249.2 247 57.5
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 6.1e-64 248.4 272 55.1
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 8.0e-64 248.1 286 52.4
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.0e-63 247.7 294 52.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.0e-63 247.7 247 57.1
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.4e-63 247.3 306 52.9
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.4e-63 247.3 264 57.6
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 3.0e-63 246.1 258 57.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 3.0e-63 246.1 283 54.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.0e-63 246.1 289 52.9
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 5.2e-63 245.4 248 58.9
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 6.8e-63 245.0 246 58.9
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 6.8e-63 245.0 246 58.9
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 6.8e-63 245.0 246 58.5
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 8.9e-63 244.6 272 54.8
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 8.9e-63 244.6 276 57.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.5e-62 243.8 299 52.2
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.5e-62 243.8 291 52.9
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.0e-62 243.4 257 56.8
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 2.0e-62 243.4 253 57.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 2.6e-62 243.0 246 58.5
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.6e-62 243.0 246 58.5
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 4.4e-62 242.3 293 53.2
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 7.5e-62 241.5 250 58.0
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.3e-61 240.7 287 53.0
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.7e-61 240.4 257 56.4
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 2.2e-61 240.0 311 49.8
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 2.9e-61 239.6 251 57.4
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 2.9e-61 239.6 284 53.2
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 3.7e-61 239.2 258 54.7
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 3.7e-61 239.2 290 51.4
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 6.4e-61 238.4 249 58.6
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 6.4e-61 238.4 277 53.1
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.1e-60 237.7 296 51.0
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.1e-60 237.7 286 52.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.8e-60 236.9 294 50.7
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.2e-59 234.2 239 56.5
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.6e-59 233.8 284 53.2
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 2.7e-59 233.0 288 52.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 2.7e-59 233.0 312 48.7
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 2.7e-59 233.0 309 49.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 3.5e-59 232.6 256 55.5
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 2.3e-58 229.9 305 48.2
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 5.0e-58 228.8 274 52.6
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 9.5e-57 224.6 290 50.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 4.7e-56 222.2 281 51.6
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 6.2e-56 221.9 216 60.2
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 4.0e-55 219.2 283 53.0
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 5.2e-55 218.8 307 47.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 8.9e-55 218.0 306 47.7
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.5e-54 217.2 265 50.6
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 3.4e-54 216.1 302 45.7
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.4e-54 215.7 278 51.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 4.4e-54 215.7 278 50.0
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.4e-54 215.7 278 50.0
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.8e-54 215.3 277 50.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 4.9e-53 212.2 278 50.7
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-52 209.9 277 49.5
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-52 209.9 277 49.5
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.4e-52 209.9 220 56.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.2e-52 208.0 261 52.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 9.2e-52 208.0 274 51.5
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 3.9e-50 202.6 316 45.6
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-49 200.7 306 45.4
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.5e-49 200.7 275 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.5e-49 199.9 276 50.4
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.1e-48 196.8 285 46.0
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.7e-48 195.7 401 38.9
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 4.4e-46 189.1 186 58.6
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 5.8e-46 188.7 163 67.5
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 6.2e-40 168.7 179 56.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 5.8e-38 162.2 163 55.8
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.4e-36 156.8 179 53.6
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.7e-34 150.6 134 63.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.6e-32 144.1 134 58.2
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.0e-30 137.1 162 52.5
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 5.1e-26 122.5 141 53.2
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.4e-23 113.6 139 53.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 3.1e-23 113.2 96 62.5
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 4.5e-22 109.4 108 62.0
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 5.8e-22 109.0 161 47.8
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.2e-21 107.1 113 60.2
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.4e-17 92.0 133 50.4
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.1e-16 90.5 186 38.7
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 1.2e-14 84.7 186 33.3
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.5e-14 84.3 58 75.9
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.1e-12 78.2 102 49.0
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 2.6e-06 57.0 42 57.1


User provided reference genes

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