Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 3.3e-124 448.4 219 100.0
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 3.3e-36 156.0 159 52.8
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 3.1e-34 149.4 163 52.8
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 4.1e-34 149.1 160 51.2
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 9.1e-34 147.9 160 53.8
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 1.6e-33 147.1 180 46.7
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 5.9e-33 145.2 161 51.6
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 1.7e-32 143.7 168 53.0
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 2.2e-32 143.3 160 52.5
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 3.8e-32 142.5 160 52.5
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 5.0e-32 142.1 159 50.9
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 8.5e-32 141.4 189 44.4
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 8.5e-32 141.4 168 48.8
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.1e-31 141.0 166 50.0
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 1.1e-31 141.0 174 48.3
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.5e-31 140.6 164 50.6
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 3.2e-31 139.4 159 53.5
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 5.5e-31 138.7 172 48.8
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 7.2e-31 138.3 186 44.6
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 7.2e-31 138.3 168 49.4
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.4e-31 137.9 191 44.5
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.4e-31 137.9 191 44.5
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 2.7e-30 136.3 168 48.8
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 3.6e-30 136.0 164 48.8
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 3.6e-30 136.0 187 44.4
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 4.7e-30 135.6 159 49.1
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.0e-29 134.4 177 46.3
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 1.8e-29 133.7 157 49.7
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 2.3e-29 133.3 164 45.7
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 3.0e-29 132.9 166 46.4
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 4.0e-29 132.5 182 46.7
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 4.0e-29 132.5 159 49.1
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 8.8e-29 131.3 166 45.8
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 1.2e-28 131.0 167 43.1
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.0e-28 130.2 168 47.0
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 2.0e-28 130.2 150 49.3
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 2.6e-28 129.8 163 47.9
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.3e-28 129.4 160 46.9
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.3e-28 129.4 160 46.9
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 3.3e-28 129.4 160 48.8
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 5.7e-28 128.6 164 47.0
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 5.7e-28 128.6 164 47.0
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 5.7e-28 128.6 164 47.0
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 5.7e-28 128.6 168 46.4
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 7.5e-28 128.3 181 45.3
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 7.5e-28 128.3 168 46.4
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 9.7e-28 127.9 165 47.9
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 1.3e-27 127.5 139 53.2
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 1.7e-27 127.1 169 47.3
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 1.7e-27 127.1 159 48.4
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 3.7e-27 125.9 169 47.9
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 4.8e-27 125.6 181 44.2
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 8.2e-27 124.8 188 41.5
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 1.1e-26 124.4 185 41.6
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 1.1e-26 124.4 158 46.8
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 1.4e-26 124.0 173 46.8
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 1.8e-26 123.6 187 44.4
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 3.1e-26 122.9 163 45.4
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 3.1e-26 122.9 197 41.1
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 5.3e-26 122.1 182 42.9
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 7.0e-26 121.7 181 40.9
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 1.2e-25 120.9 186 43.0
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.0e-25 120.2 168 43.5
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 2.7e-25 119.8 163 47.2
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 3.5e-25 119.4 162 47.5
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 4.5e-25 119.0 180 45.6
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.5e-25 119.0 164 43.9
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 7.7e-25 118.2 157 43.9
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 7.7e-25 118.2 164 42.7
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 2.2e-24 116.7 158 46.2
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 2.9e-24 116.3 156 44.9
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 5.0e-24 115.5 178 43.3
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 6.5e-24 115.2 173 41.0
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 6.5e-24 115.2 147 49.7
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 8.5e-24 114.8 147 49.0
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 1.5e-23 114.0 163 46.0
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 1.9e-23 113.6 163 46.0
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 1.9e-23 113.6 163 46.0
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 2.5e-23 113.2 160 45.6
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 7.2e-23 111.7 152 44.7
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 2.1e-22 110.2 140 45.0
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 4.7e-22 109.0 133 46.6
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 6.1e-22 108.6 163 44.2
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 8.0e-22 108.2 160 45.6
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 2.3e-21 106.7 135 47.4
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 2.3e-21 106.7 135 48.1
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 3.0e-21 106.3 131 46.6
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 6.8e-21 105.1 133 48.9
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 8.8e-21 104.8 164 45.1
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 8.8e-21 104.8 139 44.6
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.5e-20 104.0 130 46.2
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 2.0e-20 103.6 135 46.7
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 2.0e-20 103.6 141 47.5
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.6e-20 103.2 133 48.1
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 3.4e-20 102.8 154 42.9
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 3.4e-20 102.8 138 47.8
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 3.4e-20 102.8 120 48.3
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 1.7e-19 100.5 119 47.1
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 2.8e-19 99.8 102 56.9
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 4.8e-19 99.0 156 43.6
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 8.3e-19 98.2 164 39.0
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 1.8e-18 97.1 121 47.9
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 1.8e-18 97.1 121 47.9
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 1.8e-18 97.1 121 47.9
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 1.8e-18 97.1 161 42.2
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 1.8e-18 97.1 132 45.5
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 2.0e-17 93.6 149 41.6
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 7.7e-17 91.7 128 46.9
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 8.5e-16 88.2 136 43.4
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 4.2e-15 85.9 188 36.2
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 4.2e-15 85.9 131 42.7
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 5.5e-15 85.5 130 40.8
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 4.7e-14 82.4 126 39.7
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 6.1e-14 82.0 139 42.4
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.0e-13 81.3 170 38.8
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 3.4e-12 76.3 135 42.2
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.7e-11 73.9 122 41.8
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 6.3e-11 72.0 168 33.9
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 7.0e-10 68.6 125 40.8
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 1.2e-09 67.8 124 39.5
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 2.5e-07 60.1 151 35.1
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.6e-06 57.4 45 57.8


User provided reference genes

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