Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19736 Sapria himalayana HOM05D000002 ORTHO05D001134 1.1e-57 226.5 116 100.0
RcHm_v2.0_Chr7g0204631 Rosa chinensis HOM05D000002 ORTHO05D001134 2.0e-19 99.4 120 47.5
RcHm_v2.0_Chr2g0159591 Rosa chinensis HOM05D000002 ORTHO05D001134 1.3e-18 96.7 120 46.7
Sabra03G0062000 Salix brachista HOM05D004742 ORTHO05D001134 2.2e-18 95.9 120 45.0
Sabra05G0109400 Salix brachista HOM05D000002 ORTHO05D001134 2.2e-18 95.9 120 45.0
Sabra11G0084000 Salix brachista HOM05D000002 ORTHO05D001134 2.2e-18 95.9 120 45.0
Rhsim04G0079900 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.8e-18 95.5 122 44.3
Sabra02G0128400 Salix brachista HOM05D000002 ORTHO05D001134 8.3e-18 94.0 120 44.2
CAN.G371.121 Capsicum annuum HOM05D000272 ORTHO05D000164 1.8e-17 92.8 88 53.4
MD08G1232100 Malus domestica HOM05D000002 ORTHO05D001134 3.1e-17 92.0 120 44.2
SEGI_14493 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.0e-17 90.9 118 43.2
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 9.1e-17 90.5 120 43.3
CAN.G322.14 Capsicum annuum HOM05D000058 ORTHO05D000077 2.7e-16 89.0 88 55.7
CiPaw.11G068500 Carya illinoinensis HOM05D000002 ORTHO05D000001 5.9e-16 87.8 120 39.2
TWI39G0705 Tripterygium wilfordii HOM05D000002 ORTHO05D001134 5.9e-16 87.8 120 40.8
PSO017G3020 Papaver somniferum HOM05D000002 ORTHO05D001134 1.0e-15 87.0 120 41.7
Rhsim03G0051300 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim03G0212000 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim05G0173500 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim05G0211500 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim09G0038600 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim09G0182400 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
Rhsim11G0114100 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.3e-15 86.7 120 41.7
BolC4t25526H Brassica oleracea HOM05D000002 ORTHO05D001134 3.8e-15 85.1 120 40.0
Rhsim12G0033700 Rhododendron simsii HOM05D000002 ORTHO05D001134 8.5e-15 84.0 120 40.0
AL85U10020 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 1.1e-14 83.6 120 40.8
PSO339G1018 Papaver somniferum HOM05D000002 ORTHO05D001134 1.5e-14 83.2 118 38.1
PSO478G2248 Papaver somniferum HOM05D000002 ORTHO05D001134 1.5e-14 83.2 120 40.8
Rhsim01G0099400 Rhododendron simsii HOM05D000002 ORTHO05D001134 3.2e-14 82.0 120 40.0
THA.LOC104804898 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 7.2e-14 80.9 120 36.7
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 9.4e-14 80.5 120 38.3
PSO210G2943 Papaver somniferum HOM05D000002 ORTHO05D001134 1.2e-13 80.1 118 38.1
RhsimUnG0047800 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.2e-13 80.1 120 40.0
PSO832G2531 Papaver somniferum HOM05D000002 ORTHO05D001134 1.6e-13 79.7 120 37.5
Dinv16284 Davidia involucrata HOM05D000136 ORTHO05D000080 2.1e-13 79.3 120 38.3
PSO170G5459 Papaver somniferum HOM05D000002 ORTHO05D001134 2.7e-13 79.0 118 37.3
AUR62019119 Chenopodium quinoa HOM05D000002 ORTHO05D001134 4.7e-13 78.2 111 36.9
Rhsim06G0170200 Rhododendron simsii HOM05D000002 ORTHO05D001134 4.7e-13 78.2 120 39.2
GSVIVG01014104001 Vitis vinifera HOM05D000043 ORTHO05D000223 8.8e-12 73.9 120 34.2
THA.LOC104805040 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 1.5e-11 73.2 116 36.2
Rhsim10G0161400 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.6e-11 72.4 94 41.5
PSO063G4025 Papaver somniferum HOM05D000002 ORTHO05D001134 5.7e-11 71.2 107 36.4
AUR62026226 Chenopodium quinoa HOM05D000002 ORTHO05D001134 7.5e-11 70.9 120 35.8
Lalb_Chr25g0290031 Lupinus albus HOM05D000002 ORTHO05D001134 1.7e-10 69.7 109 35.8
ECA248G2336 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-10 69.3 120 35.0
Ciclev10013534m.g Citrus clementina HOM05D000002 ORTHO05D001134 2.8e-10 68.9 86 43.0
ECA233G0623 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-10 68.9 120 35.0
ECA232G4055 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-10 68.2 120 35.0
ECA233G0481 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-10 67.8 120 35.0
ECA234G3684 Erigeron canadensis HOM05D000002 ORTHO05D001134 8.3e-10 67.4 120 34.2
ECA238G0412 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-10 67.4 120 34.2
SHI06209 Sapria himalayana HOM05D000002 ORTHO05D001134 8.3e-10 67.4 60 56.7
ECA240G2188 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 120 34.2
ECA240G3538 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-09 67.0 120 35.0
Sopen10g025130 Solanum pennellii HOM05D000002 ORTHO05D001134 1.1e-09 67.0 88 40.9
ECA246G4054 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 66.6 120 34.2
ECA247G3674 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.4e-09 66.6 114 35.1
ECA232G0086 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 66.2 120 34.2
ECA246G4071 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.8e-09 66.2 120 34.2
PSO210G0743 Papaver somniferum HOM05D000002 ORTHO05D001134 1.8e-09 66.2 107 34.6
Sabra01G0088800 Salix brachista HOM05D000002 ORTHO05D001134 1.8e-09 66.2 70 47.1
ECA232G2889 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-09 65.9 120 35.0
ECA240G1216 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-09 65.9 120 34.2
SHI01644 Sapria himalayana HOM05D000002 ORTHO05D001134 2.4e-09 65.9 77 46.8
ECA232G0970 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-09 65.5 120 33.3
ECA233G0511 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-09 65.5 120 33.3
ECA233G2911 Erigeron canadensis HOM05D000002 ORTHO05D001134 4.1e-09 65.1 120 34.2
Sabra04G0008500 Salix brachista HOM05D000002 ORTHO05D001134 4.1e-09 65.1 70 45.7
Sabra04G0091300 Salix brachista HOM05D000002 ORTHO05D001134 4.1e-09 65.1 70 45.7
Sabra05G0004000 Salix brachista HOM05D000311 ORTHO05D000183 4.1e-09 65.1 70 45.7
Sabra09G0001500 Salix brachista HOM05D008748 ORTHO05D000649 4.1e-09 65.1 70 45.7
Sabra11G0113400 Salix brachista HOM05D000002 ORTHO05D001134 4.1e-09 65.1 70 45.7
Sabra17G0001300 Salix brachista HOM05D000002 ORTHO05D001134 4.1e-09 65.1 70 45.7
ECA232G1993 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-09 64.7 120 33.3
ECA240G0039 Erigeron canadensis HOM05D000002 ORTHO05D001134 5.4e-09 64.7 120 33.3
Ciclev10024052m.g Citrus clementina HOM05D000002 ORTHO05D001134 7.0e-09 64.3 116 33.6
ECA234G2496 Erigeron canadensis HOM05D000327 ORTHO05D001134 7.0e-09 64.3 120 34.2
Lj1g0016784 Lotus japonicus HOM05D007742 ORTHO05D001134 7.0e-09 64.3 85 41.2
ECA233G4811 Erigeron canadensis HOM05D000002 ORTHO05D001134 9.1e-09 63.9 120 33.3
ECA236G0974 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-09 63.9 120 34.2
CSS0013984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-08 63.2 120 31.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-08 63.2 120 33.3
ECA236G0811 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-08 62.8 120 32.5
Sabra16G0164900 Salix brachista HOM05D000002 ORTHO05D001134 3.5e-08 62.0 70 44.3
Sabra17G0110500 Salix brachista HOM05D000002 ORTHO05D001134 5.9e-08 61.2 66 47.0
CSS0016992 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.7e-08 60.8 120 31.7
ECA232G3032 Erigeron canadensis HOM05D000002 ORTHO05D001134 7.7e-08 60.8 120 31.7
GSVIVG01021646001 Vitis vinifera HOM05D000002 ORTHO05D001134 7.7e-08 60.8 120 30.8
Gorai.010G061700 Gossypium raimondii HOM05D000002 ORTHO05D001134 1.0e-07 60.5 91 36.3
ECA238G0421 Erigeron canadensis HOM05D000122 ORTHO05D002085 1.3e-07 60.1 110 33.6
ECA247G1980 Erigeron canadensis HOM05D000315 ORTHO05D000001 1.3e-07 60.1 115 30.4
Sopen05g002730 Solanum pennellii HOM05D001102 ORTHO05D001018 1.3e-07 60.1 120 31.7
Rhsim03G0077200 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.7e-07 59.7 120 30.8
Rhsim10G0190600 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.7e-07 59.7 120 30.8
RhsimUnG0050300 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.7e-07 59.7 75 42.7
CSS0047879 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.3e-07 59.3 120 30.0
PSO339G1161 Papaver somniferum HOM05D000002 ORTHO05D001134 2.3e-07 59.3 115 27.8
Rhsim13G0162800 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.3e-07 59.3 119 30.3
RcHm_v2.0_Chr1g0373951 Rosa chinensis HOM05D000002 ORTHO05D001134 2.9e-07 58.9 106 34.0
RcHm_v2.0_Chr6g0304521 Rosa chinensis HOM05D000002 ORTHO05D001134 3.8e-07 58.5 106 34.0
SHI01647 Sapria himalayana HOM05D000002 ORTHO05D001134 3.8e-07 58.5 76 51.3
Rhsim02G0027700 Rhododendron simsii HOM05D000002 ORTHO05D001134 5.0e-07 58.2 120 30.0
Rhsim11G0020400 Rhododendron simsii HOM05D000002 ORTHO05D001134 5.0e-07 58.2 75 41.3
PSO731G0088 Papaver somniferum HOM05D000002 ORTHO05D001134 6.6e-07 57.8 105 31.4
Rhsim05G0138100 Rhododendron simsii HOM05D000067 ORTHO05D000280 6.6e-07 57.8 98 35.7
Cpa.g.sc11.129 Carica papaya HOM05D000002 ORTHO05D001134 8.6e-07 57.4 88 34.1
Ciclev10023842m.g Citrus clementina HOM05D000002 ORTHO05D001134 8.6e-07 57.4 77 41.6
Rhsim08G0116800 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.6e-07 57.4 98 35.7
Atru.chr3.2096 Acer truncatum HOM05D000002 ORTHO05D001134 1.1e-06 57.0 61 42.6
Gorai.006G195600 Gossypium raimondii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 85 38.8
PSO782G2391 Papaver somniferum HOM05D000002 ORTHO05D001134 1.1e-06 57.0 120 26.7
Rhsim10G0199300 Rhododendron simsii HOM05D000002 ORTHO05D001134 1.1e-06 57.0 120 30.0
RcHm_v2.0_Chr1g0373471 Rosa chinensis HOM05D000002 ORTHO05D001134 1.1e-06 57.0 106 33.0
RcHm_v2.0_Chr2g0086291 Rosa chinensis HOM05D000002 ORTHO05D001134 1.1e-06 57.0 106 33.0
CSS0019998 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.5e-06 56.6 120 29.2
CSS0022146 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.5e-06 56.6 120 30.0
CSS0034105 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.5e-06 56.6 120 30.8
CSS0049155 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.5e-06 56.6 120 30.0
Rhsim03G0139100 Rhododendron simsii HOM05D004100 ORTHO05D004781 1.5e-06 56.6 98 34.7
PSO170G4470 Papaver somniferum HOM05D000002 ORTHO05D001134 1.9e-06 56.2 105 31.4
PSO339G4992 Papaver somniferum HOM05D000002 ORTHO05D001134 1.9e-06 56.2 115 27.0
ECA248G3554 Erigeron canadensis HOM05D001646 ORTHO05D001572 2.5e-06 55.8 115 30.4
PSO384G4894 Papaver somniferum HOM05D000002 ORTHO05D001134 3.3e-06 55.5 105 31.4
Sopen07g008590 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 55.5 72 40.3
SHI01652 Sapria himalayana HOM05D000002 ORTHO05D001134 4.2e-06 55.1 56 55.4
THA.LOC104823254 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 4.2e-06 55.1 120 26.7
Rhsim03G0106800 Rhododendron simsii HOM05D000002 ORTHO05D001134 7.2e-06 54.3 120 29.2
AL5G21250 Arabidopsis lyrata HOM05D000002 ORTHO05D001134 9.5e-06 53.9 75 38.7
PSO063G6885 Papaver somniferum HOM05D000002 ORTHO05D001134 9.5e-06 53.9 105 30.5


User provided reference genes

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