Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19309 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-32 141.7 63 100.0
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 2.2e-17 91.7 43 86.0
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 5.1e-14 80.5 39 82.1
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 6.7e-14 80.1 52 63.5
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.9e-13 78.6 52 61.5
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-13 78.2 52 61.5
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 5.7e-13 77.0 39 79.5
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 9.7e-13 76.3 52 59.6
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-12 75.9 39 74.4
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 6.3e-12 73.6 43 67.4
PSO384G0215 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-11 72.4 52 53.8
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 2.4e-11 71.6 56 51.8
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 2.4e-11 71.6 52 55.8
HanXRQChr10g0279481 Helianthus annuus HOM05D000034 ORTHO05D000285 3.1e-11 71.2 36 77.8
SHI27895 Sapria himalayana HOM05D000034 ORTHO05D000037 6.9e-11 70.1 43 69.8
CANSAT21G2255 Cannabis sativa HOM05D000034 ORTHO05D000037 1.2e-10 69.3 56 48.2
PSO675G8710 Papaver somniferum HOM05D000034 ORTHO05D000037 1.5e-10 68.9 52 51.9
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-10 68.2 43 62.8
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-10 68.2 43 62.8
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 3.4e-10 67.8 36 69.4
Aqoxy3G01210 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.5e-10 67.4 53 50.9
SHI32230 Sapria himalayana HOM05D000034 ORTHO05D000037 4.5e-10 67.4 49 61.2
PSO063G4406 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
PSO210G4734 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
PSO541G0934 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 5.9e-10 67.0 52 48.1
SHI11769 Sapria himalayana HOM05D000034 ORTHO05D000037 5.9e-10 67.0 40 72.5
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 65.5 52 46.2
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 65.5 52 46.2
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 65.5 52 46.2
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 65.5 52 46.2
SHI11206 Sapria himalayana HOM05D000034 ORTHO05D000037 1.7e-09 65.5 32 81.2
Aqoxy3G02330 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.2e-09 65.1 55 49.1
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-09 65.1 38 68.4
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.2e-09 65.1 38 68.4
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-09 65.1 38 68.4
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-09 65.1 38 68.4
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.9e-09 64.7 46 56.5
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-09 64.7 36 63.9
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 2.9e-09 64.7 43 60.5
SHI12314 Sapria himalayana HOM05D000034 ORTHO05D000037 3.8e-09 64.3 30 80.0
SHI43773 Sapria himalayana HOM05D000034 ORTHO05D000037 3.8e-09 64.3 44 65.9
PSO210G7101 Papaver somniferum HOM05D000034 ORTHO05D000037 6.5e-09 63.5 36 63.9
SHI33942 Sapria himalayana HOM05D000034 ORTHO05D000037 6.5e-09 63.5 30 80.0
HanXRQChr12g0361021 Helianthus annuus HOM05D000034 ORTHO05D000037 8.5e-09 63.2 49 51.0
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 1.1e-08 62.8 48 47.9
PSO832G4219 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-08 62.8 34 70.6
PSO561G0039 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 36 61.1
SHI19211 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-08 62.0 30 76.7
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.5e-08 61.6 40 62.5
HanXRQChr16g0506241 Helianthus annuus HOM05D000034 ORTHO05D000037 3.2e-08 61.2 47 51.1
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 3.2e-08 61.2 52 44.2
SHI10579 Sapria himalayana HOM05D000034 ORTHO05D000037 5.5e-08 60.5 36 72.2
SHI05889 Sapria himalayana HOM05D000034 ORTHO05D000037 9.4e-08 59.7 29 82.8
Aqoxy4G01816 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.6e-07 58.9 50 48.0
SHI22347 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-07 58.9 51 45.1
PSO017G4039 Papaver somniferum HOM05D000034 ORTHO05D000037 2.1e-07 58.5 36 61.1
arahy.Tifrunner.gnm1.ann1.HDS2CW Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.JL1WEN Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.TEB0R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.UAQH0I Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 39 59.0
arahy.Tifrunner.gnm1.ann1.D4V5SR Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-07 57.4 39 61.5
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 7.9e-07 56.6 47 51.1
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 7.9e-07 56.6 47 51.1
CANSAT64G2926 Cannabis sativa HOM05D000034 ORTHO05D000037 7.9e-07 56.6 47 51.1
ECA233G0323 Erigeron canadensis HOM05D000034 ORTHO05D000037 7.9e-07 56.6 45 55.6
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 7.9e-07 56.6 45 55.6
TAR049G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 7.9e-07 56.6 37 62.2
arahy.Tifrunner.gnm1.ann1.W21WHR Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 56.2 39 59.0
SHI01772 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-06 56.2 39 53.8
SHI02706 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-06 56.2 29 75.9
SHI09403 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-06 56.2 26 84.6
SHI30049 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-06 56.2 39 56.4
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.4e-06 55.8 51 47.1
ECA246G3575 Erigeron canadensis HOM05D001106 ORTHO05D000037 1.4e-06 55.8 49 46.9
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 1.8e-06 55.5 43 53.5
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 1.8e-06 55.5 55 47.3
SHI23384 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-06 55.1 36 66.7
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 3.0e-06 54.7 43 53.5
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 3.0e-06 54.7 43 53.5
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 3.0e-06 54.7 43 53.5
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.0e-06 54.7 45 53.3
SHI50258 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-06 54.7 33 69.7
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 3.9e-06 54.3 37 56.8
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 3.9e-06 54.3 54 44.4
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 3.9e-06 54.3 37 59.5
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-06 53.9 39 56.4
arahy.Tifrunner.gnm1.ann1.Y4Z60F Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-06 53.9 39 56.4
PSO339G0656 Papaver somniferum HOM05D000034 ORTHO05D000037 5.1e-06 53.9 53 39.6
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 6.7e-06 53.5 38 55.3
FvH4_2g11121 Fragaria vesca HOM05D000034 ORTHO05D000037 6.7e-06 53.5 38 55.3
FvH4_6g30381 Fragaria vesca HOM05D000034 ORTHO05D000037 6.7e-06 53.5 38 55.3
Lj6g0020842 Lotus japonicus HOM05D000034 ORTHO05D000037 6.7e-06 53.5 40 55.0
QL08p042355 Quercus lobata HOM05D000034 ORTHO05D000037 6.7e-06 53.5 43 51.2
TPR.G12453 Trifolium pratense HOM05D000583 ORTHO05D000442 6.7e-06 53.5 43 55.8
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 6.7e-06 53.5 37 59.5
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 8.8e-06 53.1 37 56.8
arahy.Tifrunner.gnm1.ann1.0FUF30 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 41 56.1
arahy.Tifrunner.gnm1.ann1.BI48B2 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 45 46.7
arahy.Tifrunner.gnm1.ann1.FATU7S Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 41 56.1
arahy.Tifrunner.gnm1.ann1.MCQ4MF Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 41 56.1
arahy.Tifrunner.gnm1.ann1.WZP6LC Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 39 53.8
CANSAT80G1843 Cannabis sativa HOM05D000034 ORTHO05D000037 8.8e-06 53.1 60 43.3
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 8.8e-06 53.1 37 56.8
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 8.8e-06 53.1 37 56.8
FvH4_4g30624 Fragaria vesca HOM05D000034 ORTHO05D000037 8.8e-06 53.1 37 56.8
PSO017G3185 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-06 53.1 46 41.3
Psat5g170880 Pisum sativum HOM05D000034 ORTHO05D000037 8.8e-06 53.1 37 62.2
RcHm_v2.0_Chr7g0199291 Rosa chinensis HOM05D000034 ORTHO05D000037 8.8e-06 53.1 43 48.8
SHI17513 Sapria himalayana HOM05D000034 ORTHO05D000037 8.8e-06 53.1 30 70.0
TPR.G1026 Trifolium pratense HOM05D000034 ORTHO05D000037 8.8e-06 53.1 47 40.4
TPR.G34480 Trifolium pratense HOM05D000034 ORTHO05D000037 8.8e-06 53.1 44 45.5
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 38 57.9
TWI36G0210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 40 52.5
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 38 57.9


User provided reference genes

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