Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 9.9e-100 366.7 174 100.0
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 5.9e-28 128.3 90 72.2
SHI03437 Sapria himalayana HOM05D004750 ORTHO05D005598 2.2e-22 109.8 82 69.5
SHI11405 Sapria himalayana HOM05D004750 ORTHO05D005598 1.9e-18 96.7 77 63.6
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-18 94.7 69 71.0
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.4e-16 90.5 65 67.7
SHI18114 Sapria himalayana HOM05D003060 ORTHO05D001716 1.4e-16 90.5 81 61.7
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 1.8e-16 90.1 51 80.4
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 4.0e-16 89.0 73 63.0
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 4.0e-16 89.0 65 66.2
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.2e-16 88.6 51 76.5
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.2e-16 88.6 51 76.5
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 5.2e-16 88.6 51 76.5
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.2e-15 87.4 51 74.5
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 1.2e-15 87.4 51 74.5
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.2e-15 87.4 51 74.5
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 1.5e-15 87.0 65 64.6
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.5e-15 87.0 65 64.6
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 2.0e-15 86.7 51 74.5
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 2.0e-15 86.7 51 76.5
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 2.0e-15 86.7 51 76.5
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 2.6e-15 86.3 65 61.5
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 2.6e-15 86.3 51 74.5
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 2.6e-15 86.3 56 71.4
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 3.4e-15 85.9 51 72.5
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 3.4e-15 85.9 65 64.6
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 4.4e-15 85.5 65 63.1
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 4.4e-15 85.5 51 74.5
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 4.4e-15 85.5 51 72.5
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 4.4e-15 85.5 51 74.5
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 4.4e-15 85.5 51 72.5
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 74.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 74.5
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 72.5
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 74.5
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 72.5
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 5.8e-15 85.1 65 61.5
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 5.8e-15 85.1 51 72.5
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 7.5e-15 84.7 65 63.1
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 7.5e-15 84.7 51 70.6
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 7.5e-15 84.7 51 72.5
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 7.5e-15 84.7 65 63.1
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 7.5e-15 84.7 65 63.1
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 7.5e-15 84.7 51 74.5
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 7.5e-15 84.7 51 74.5
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 72.5
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 9.8e-15 84.3 51 74.5
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 9.8e-15 84.3 65 61.5
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 72.5
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 74.5
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 9.8e-15 84.3 51 72.5
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 1.3e-14 84.0 65 61.5
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 1.3e-14 84.0 65 60.0
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.3e-14 84.0 51 72.5
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 1.3e-14 84.0 51 72.5
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 1.3e-14 84.0 65 61.5
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 1.7e-14 83.6 65 61.5
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 1.7e-14 83.6 51 68.6
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.7e-14 83.6 51 70.6
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 2.2e-14 83.2 51 72.5
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 2.2e-14 83.2 51 70.6
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 2.2e-14 83.2 51 70.6
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 2.2e-14 83.2 65 63.1
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 2.2e-14 83.2 65 63.1
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 2.2e-14 83.2 65 63.1
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 72.5
SHI11344 Sapria himalayana HOM05D001040 ORTHO05D002795 2.9e-14 82.8 45 84.4
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 2.9e-14 82.8 51 70.6
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.7e-14 82.4 51 72.5
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.7e-14 82.4 51 72.5
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 4.9e-14 82.0 51 70.6
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 6.4e-14 81.6 51 70.6
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 6.4e-14 81.6 65 60.0
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 6.4e-14 81.6 51 68.6
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 6.4e-14 81.6 51 68.6
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 6.4e-14 81.6 51 72.5
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 8.3e-14 81.3 51 64.7
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 8.3e-14 81.3 51 64.7
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 8.3e-14 81.3 65 60.0
SHI36417 Sapria himalayana HOM05D000023 ORTHO05D000014 8.3e-14 81.3 54 74.1
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 8.3e-14 81.3 51 70.6
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.1e-13 80.9 51 66.7
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 1.1e-13 80.9 51 68.6
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 1.1e-13 80.9 51 68.6
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.1e-13 80.9 65 56.9
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 1.4e-13 80.5 51 64.7
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.4e-13 80.5 51 66.7
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 1.8e-13 80.1 51 62.7
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 3.2e-13 79.3 51 68.6
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 3.2e-13 79.3 51 68.6
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 3.2e-13 79.3 51 66.7
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 3.2e-13 79.3 51 66.7
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 5.4e-13 78.6 51 64.7
SEGI_36322 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 5.4e-13 78.6 61 60.7
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 7.0e-13 78.2 65 58.5
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 9.2e-13 77.8 88 54.5
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 1.2e-12 77.4 65 61.5
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 1.6e-12 77.0 51 64.7
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-11 74.3 73 57.5
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 1.0e-11 74.3 51 62.7
Oeu042861.1 Olea europaea HOM05D004875 ORTHO05D005598 2.3e-11 73.2 46 71.7
SHI22837 Sapria himalayana HOM05D004750 ORTHO05D005598 2.3e-11 73.2 44 77.3
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 6.6e-11 71.6 43 72.1
SHI04984 Sapria himalayana HOM05D004750 ORTHO05D006655 5.6e-10 68.6 70 52.9
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-09 66.2 78 50.0
SHI10165 Sapria himalayana HOM05D004103 ORTHO05D005242 8.0e-09 64.7 59 59.3
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 8.0e-09 64.7 70 51.4
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 1.1e-08 64.3 62 58.1
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 3.1e-08 62.8 37 81.1
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 1.5e-07 60.5 44 59.1
SHI06884 Sapria himalayana HOM05D002142 ORTHO05D001189 2.0e-07 60.1 36 77.8
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 2.6e-07 59.7 43 53.5
SHI20407 Sapria himalayana HOM05D004595 ORTHO05D005800 3.4e-07 59.3 58 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 5.8e-07 58.5 42 57.1
SMO117G0137 Selaginella moellendorffii HOM05D004875 ORTHO05D005598 5.8e-07 58.5 37 62.2
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 9.8e-07 57.8 66 54.5
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 1.3e-06 57.4 57 56.1
SHI08954 Sapria himalayana HOM05D004363 ORTHO05D005110 2.9e-06 56.2 79 43.0
SHI15282 Sapria himalayana HOM05D012376 ORTHO05D006881 2.9e-06 56.2 80 45.0
SHI02882 Sapria himalayana HOM05D000942 ORTHO05D000918 3.7e-06 55.8 30 80.0
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 4.9e-06 55.5 37 67.6
SHI27519 Sapria himalayana HOM05D004808 ORTHO05D005279 8.3e-06 54.7 50 58.0


User provided reference genes

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