Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19216 Sapria himalayana HOM05D004875 ORTHO05D005598 3.0e-105 385.2 196 100.0
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 2.1e-26 123.2 76 77.6
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 8.2e-26 121.3 79 73.4
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.4e-25 120.6 76 76.3
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.4e-25 119.8 76 76.3
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 3.1e-25 119.4 81 69.1
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 3.1e-25 119.4 76 73.7
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 4.0e-25 119.0 76 75.0
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 4.0e-25 119.0 76 72.4
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 4.0e-25 119.0 82 72.0
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 4.0e-25 119.0 79 72.2
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 5.3e-25 118.6 76 75.0
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.3e-25 118.6 76 75.0
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.3e-25 118.6 76 75.0
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 6.9e-25 118.2 76 75.0
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 9.0e-25 117.9 76 72.4
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 1.2e-24 117.5 76 72.4
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.2e-24 117.5 76 73.7
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 1.2e-24 117.5 76 72.4
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 1.2e-24 117.5 76 73.7
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.2e-24 117.5 76 73.7
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 1.2e-24 117.5 79 72.2
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 1.5e-24 117.1 76 72.4
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.5e-24 117.1 76 75.0
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 1.5e-24 117.1 76 71.1
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 2.0e-24 116.7 76 71.1
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 2.0e-24 116.7 79 70.9
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 2.6e-24 116.3 76 72.4
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 2.6e-24 116.3 76 72.4
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 3.4e-24 115.9 76 71.1
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 3.4e-24 115.9 79 70.9
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 4.5e-24 115.5 76 73.7
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 4.5e-24 115.5 76 71.1
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 4.5e-24 115.5 76 72.4
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.8e-24 115.2 76 72.4
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.8e-24 115.2 76 72.4
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 5.8e-24 115.2 76 72.4
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 5.8e-24 115.2 94 61.7
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 7.6e-24 114.8 92 60.9
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.0e-23 114.4 71 77.5
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 1.0e-23 114.4 76 69.7
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.0e-23 114.4 82 67.1
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.0e-23 114.4 76 72.4
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 1.3e-23 114.0 76 71.1
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.3e-23 114.0 76 72.4
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 1.3e-23 114.0 76 71.1
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 1.3e-23 114.0 76 69.7
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 1.3e-23 114.0 72 75.0
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 1.7e-23 113.6 76 69.7
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.7e-23 113.6 76 71.1
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.7e-23 113.6 76 68.4
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 2.2e-23 113.2 76 68.4
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 2.2e-23 113.2 71 74.6
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 2.2e-23 113.2 76 69.7
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 2.2e-23 113.2 76 69.7
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 2.9e-23 112.8 76 72.4
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 2.9e-23 112.8 73 74.0
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 3.8e-23 112.5 76 68.4
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.8e-23 112.5 76 68.4
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 4.9e-23 112.1 84 64.3
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 4.9e-23 112.1 84 64.3
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 4.9e-23 112.1 76 69.7
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 4.9e-23 112.1 76 67.1
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 6.5e-23 111.7 76 72.4
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 6.5e-23 111.7 76 71.1
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 6.5e-23 111.7 76 68.4
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 8.4e-23 111.3 76 68.4
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 8.4e-23 111.3 84 64.3
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 8.4e-23 111.3 84 64.3
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 8.4e-23 111.3 84 64.3
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 8.4e-23 111.3 84 64.3
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 8.4e-23 111.3 72 73.6
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 8.4e-23 111.3 82 65.9
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 8.4e-23 111.3 81 66.7
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 1.1e-22 110.9 76 67.1
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.1e-22 110.9 82 65.9
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.9e-22 110.2 76 69.7
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 1.9e-22 110.2 76 67.1
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 1.9e-22 110.2 76 69.7
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 1.9e-22 110.2 76 65.8
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 2.5e-22 109.8 76 67.1
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 2.5e-22 109.8 76 68.4
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 3.2e-22 109.4 76 68.4
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 4.2e-22 109.0 76 67.1
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 4.2e-22 109.0 76 67.1
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 4.2e-22 109.0 76 65.8
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 4.2e-22 109.0 76 68.4
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 5.5e-22 108.6 76 65.8
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 9.3e-22 107.8 76 65.8
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 1.2e-21 107.5 76 67.1
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.6e-21 107.1 76 65.8
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 2.1e-21 106.7 76 68.4
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 2.1e-21 106.7 76 68.4
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 2.7e-21 106.3 76 63.2
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 2.7e-21 106.3 84 66.7
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 1.0e-20 104.4 84 61.9
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 1.8e-20 103.6 76 68.4
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 8.7e-20 101.3 73 64.4
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.1e-19 100.9 73 64.4
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 1.6e-18 97.1 76 65.8
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 1.8e-17 93.6 76 63.2
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 6.9e-17 91.7 76 60.5
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 5.9e-16 88.6 76 61.8
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 4.6e-13 79.0 85 45.9
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 2.3e-12 76.6 76 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 5.1e-12 75.5 77 49.4
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 5.1e-12 75.5 76 50.0
BcaC02g10491 Brassica carinata HOM05D004875 ORTHO05D005598 2.8e-10 69.7 76 50.0
C04p28250 Brassica napus HOM05D004875 ORTHO05D005598 2.8e-10 69.7 76 50.0
BolC4t24370H Brassica oleracea HOM05D004875 ORTHO05D005598 2.8e-10 69.7 76 50.0
BcaC07g37054 Brassica carinata HOM05D004875 ORTHO05D005598 6.3e-10 68.6 88 46.6
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 1.1e-09 67.8 68 47.1
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 7.7e-08 61.6 77 49.4
PRCOL_00002473 Prasinoderma coloniale HOM05D004875 ORTHO05D005598 7.2e-06 55.1 127 31.5


User provided reference genes

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