Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 0.0e+00 1597.4 830 100.0
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 3.8e-234 815.5 826 53.5
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.1e-232 809.7 826 52.9
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 2.4e-220 769.6 814 51.6
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.6e-219 765.4 831 51.1
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 8.6e-218 761.1 822 51.7
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.5e-217 760.4 831 50.9
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.9e-217 760.0 840 51.2
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 6.2e-216 755.0 832 51.0
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 2.3e-215 753.1 822 51.8
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.2e-215 751.9 847 49.7
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.8e-214 748.4 828 50.2
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.4e-212 743.0 813 50.6
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.1e-211 740.0 823 50.1
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 4.6e-211 738.8 828 49.9
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.7e-210 736.9 822 49.4
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.2e-208 730.7 813 49.8
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.6e-208 730.3 821 50.3
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 3.6e-208 729.2 813 49.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.7e-208 728.8 845 49.6
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 8.1e-208 728.0 816 49.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 8.1e-208 728.0 822 51.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.1e-207 727.6 819 48.7
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.2e-206 724.2 846 49.4
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 2.0e-206 723.4 835 49.2
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 5.8e-206 721.8 819 49.8
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.9e-205 719.5 847 49.1
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.1e-204 717.6 830 48.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.2e-204 714.5 822 50.7
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 8.6e-202 708.0 814 48.5
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.9e-201 706.8 814 48.5
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.8e-200 703.0 817 48.3
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.4e-199 699.9 820 48.5
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 8.9e-199 698.0 821 48.6
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.3e-197 694.1 825 47.9
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 4.9e-197 692.2 817 47.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 6.0e-195 685.3 850 46.8
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.3e-194 684.1 836 47.0
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.7e-194 683.7 814 46.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.5e-193 680.6 811 47.5
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 4.3e-193 679.1 813 47.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.3e-193 679.1 831 47.5
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.6e-192 677.2 836 46.2
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.8e-192 676.4 825 47.4
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.2e-192 675.2 813 46.2
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 6.2e-192 675.2 817 47.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 8.1e-192 674.9 838 46.9
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.0e-190 670.2 833 45.6
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.6e-190 669.8 811 46.9
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.1e-188 664.5 823 46.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 5.4e-188 662.1 811 46.7
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.7e-187 659.8 828 46.1
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.5e-187 659.4 828 46.1
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 4.3e-185 652.5 830 46.0
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 5.6e-185 652.1 830 46.1
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 9.0e-183 644.8 835 44.8
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 4.9e-181 639.0 807 45.7
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.4e-180 637.5 824 44.2
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.4e-180 636.7 813 46.0
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 5.4e-180 635.6 826 44.4
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.6e-179 634.0 816 44.7
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.1e-179 633.6 822 44.6
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 3.5e-179 632.9 834 43.4
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 3.9e-178 629.4 831 44.3
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 8.7e-178 628.2 833 44.8
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.6e-177 625.5 782 46.5
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 2.8e-176 623.2 808 44.4
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 8.1e-176 621.7 818 43.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.1e-176 621.7 744 46.1
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.8e-175 620.5 837 43.6
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 2.2e-173 613.6 823 44.0
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 8.4e-173 611.7 836 44.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 8.4e-173 611.7 826 44.7
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.1e-172 611.3 746 46.0
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 4.2e-172 609.4 830 44.1
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 7.1e-172 608.6 811 44.1
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.5e-171 606.3 832 44.1
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 4.6e-171 605.9 830 43.5
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 4.3e-169 599.4 819 43.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 9.6e-169 598.2 813 44.3
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 3.7e-168 596.3 833 43.6
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.6e-166 590.1 743 45.2
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.5e-164 583.6 656 49.8
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 5.5e-164 582.4 828 42.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 7.1e-164 582.0 831 43.3
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.2e-158 564.7 840 40.7
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.4e-158 563.1 611 50.1
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 3.8e-157 559.7 831 41.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.9e-156 557.4 833 40.6
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 7.4e-153 545.4 618 50.3
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 1.9e-148 530.8 813 41.6
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 6.3e-144 515.8 815 38.8
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 2.6e-134 483.8 612 46.7
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 7.2e-132 475.7 739 41.9
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.0e-127 459.1 559 49.2
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.1e-124 451.8 582 44.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 1.5e-124 451.4 802 36.5
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.0e-114 417.2 488 49.8
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.4e-106 391.7 643 37.8
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.3e-106 391.0 404 51.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 5.1e-93 346.7 515 41.4
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-81 308.9 776 32.6
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.1e-79 302.4 873 29.8
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.2e-79 300.4 358 46.6
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.9e-76 291.6 937 28.8
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 9.3e-71 272.7 492 40.2
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.6e-70 270.4 319 46.1
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.4e-63 248.8 828 28.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.9e-60 238.4 283 45.9
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.9e-55 221.9 328 40.5
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.1e-55 219.9 229 53.7
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.0e-45 189.5 219 48.9
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.0e-45 189.5 586 29.4
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 3.9e-45 187.6 542 27.9
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.5e-41 175.6 260 40.8
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.6e-38 165.6 386 31.1
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.5e-31 140.6 231 41.1
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 2.7e-22 111.7 158 44.3
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 2.7e-14 85.1 68 61.8


User provided reference genes

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