Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 5.6e-47 190.7 101 100.0
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 4.8e-22 107.8 74 73.0
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 1.1e-21 106.7 74 73.0
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.8e-21 105.9 74 71.6
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 4.1e-21 104.8 74 73.0
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 4.1e-21 104.8 74 73.0
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 4.1e-21 104.8 74 73.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 5.3e-21 104.4 74 70.3
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.3e-21 104.4 74 70.3
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.3e-21 104.4 74 70.3
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.3e-21 104.4 74 70.3
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 6.9e-21 104.0 74 70.3
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 6.9e-21 104.0 74 70.3
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 6.9e-21 104.0 74 70.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 6.9e-21 104.0 74 70.3
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 9.1e-21 103.6 78 66.7
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 9.1e-21 103.6 78 66.7
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 9.1e-21 103.6 74 70.3
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 9.1e-21 103.6 74 70.3
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 9.1e-21 103.6 74 70.3
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 9.1e-21 103.6 74 68.9
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 70.3
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 70.3
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 68.9
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 68.9
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 70.3
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 68.9
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 1.2e-20 103.2 74 68.9
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.5e-20 102.8 74 68.9
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 1.5e-20 102.8 74 68.9
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.5e-20 102.8 74 68.9
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.5e-20 102.8 74 68.9
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.0e-20 102.4 74 68.9
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.0e-20 102.4 74 68.9
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 2.0e-20 102.4 74 68.9
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 3.4e-20 101.7 74 67.6
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 4.5e-20 101.3 74 67.6
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 4.5e-20 101.3 79 65.8
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 5.9e-20 100.9 74 68.9
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 5.9e-20 100.9 74 68.9
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 5.9e-20 100.9 74 68.9
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 5.9e-20 100.9 74 66.2
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 5.9e-20 100.9 74 68.9
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 7.7e-20 100.5 74 68.9
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 7.7e-20 100.5 74 67.6
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 7.7e-20 100.5 74 68.9
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 7.7e-20 100.5 74 68.9
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 1.0e-19 100.1 74 66.2
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.0e-19 100.1 74 68.9
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.0e-19 100.1 74 67.6
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.0e-19 100.1 74 68.9
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.0e-19 100.1 74 66.2
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 1.3e-19 99.8 74 70.3
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.3e-19 99.8 74 68.9
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.3e-19 99.8 74 67.6
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.7e-19 99.4 74 68.9
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.7e-19 99.4 74 68.9
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.7e-19 99.4 74 67.6
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.7e-19 99.4 74 66.2
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.7e-19 99.4 74 67.6
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 2.2e-19 99.0 75 64.0
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 2.2e-19 99.0 74 68.9
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 2.2e-19 99.0 74 66.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 2.9e-19 98.6 74 64.9
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 2.9e-19 98.6 74 64.9
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 2.9e-19 98.6 74 66.2
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 5.0e-19 97.8 75 69.3
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.0e-19 97.8 74 66.2
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 6.5e-19 97.4 74 64.9
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 6.5e-19 97.4 74 64.9
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 6.5e-19 97.4 74 64.9
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 8.5e-19 97.1 74 60.8
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 8.5e-19 97.1 74 64.9
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 1.1e-18 96.7 74 66.2
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.9e-18 95.9 74 62.2
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 2.5e-18 95.5 74 63.5
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 3.2e-18 95.1 74 66.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 3.2e-18 95.1 74 64.9
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 4.2e-18 94.7 74 64.9
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 4.2e-18 94.7 74 62.2
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 5.5e-18 94.4 74 64.9
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 7.2e-18 94.0 74 66.2
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.2e-17 93.2 74 60.8
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.6e-17 92.8 74 63.5
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 4.7e-17 91.3 75 66.7
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.8e-16 89.4 85 60.0
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 3.0e-16 88.6 74 59.5
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.7e-14 82.8 74 58.1
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 4.8e-14 81.3 88 53.4
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.4e-13 79.0 74 58.1
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.7e-11 72.8 54 68.5
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.7e-11 72.8 54 68.5
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 8.5e-11 70.5 74 48.6
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.4e-10 67.0 60 56.7


User provided reference genes

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