Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18930 Sapria himalayana HOM05D004216 ORTHO05D004926 2.0e-149 532.3 261 100.0
Cfa019828 Carpinus fangiana HOM05D004216 ORTHO05D004926 1.7e-34 150.6 248 39.5
Sabra15G0075800 Salix brachista HOM05D004216 ORTHO05D004926 2.2e-34 150.2 248 39.1
Cpa.g.sc1020.2 Carica papaya HOM05D004216 ORTHO05D004926 6.4e-34 148.7 247 38.1
Potri.015G050800 Populus trichocarpa HOM05D004216 ORTHO05D004926 3.2e-33 146.4 248 38.3
Manes.05G119100 Manihot esculenta HOM05D004216 ORTHO05D004926 5.4e-33 145.6 239 38.9
Eucgr.K02653 Eucalyptus grandis HOM05D004216 ORTHO05D004926 2.0e-32 143.7 111 60.4
ClCG04G011280 Citrullus lanatus HOM05D004216 ORTHO05D004926 1.0e-31 141.4 251 35.9
Atru.chr9.749 Acer truncatum HOM05D004216 ORTHO05D004926 1.3e-31 141.0 247 36.8
Ca_02536_v3 Cicer arietinum L. HOM05D004216 ORTHO05D004926 2.3e-31 140.2 252 37.7
TWI81G0292 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 2.3e-31 140.2 247 36.0
MELO3C002074.2 Cucumis melo HOM05D004216 ORTHO05D004926 5.0e-31 139.0 251 35.5
CiPaw.15G126300 Carya illinoinensis HOM05D004216 ORTHO05D004926 1.1e-30 137.9 247 36.4
Lalb_Chr12g0197541 Lupinus albus HOM05D004216 ORTHO05D004926 1.5e-30 137.5 247 37.7
Ciclev10018514m.g Citrus clementina HOM05D004216 ORTHO05D004926 1.9e-30 137.1 249 37.8
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea HOM05D004216 ORTHO05D004926 4.3e-30 136.0 254 37.4
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea HOM05D004216 ORTHO05D004926 5.6e-30 135.6 254 37.4
QL10p022943 Quercus lobata HOM05D004216 ORTHO05D004926 1.2e-29 134.4 255 34.9
CsaV3_1G006480 Cucumis sativus L. HOM05D004216 ORTHO05D004926 1.6e-29 134.0 251 34.3
Glyma.05G013400 Glycine max HOM05D004216 ORTHO05D004926 2.8e-29 133.3 117 59.0
PGR044G2306 Punica granatum HOM05D004216 ORTHO05D004926 3.6e-29 132.9 96 63.5
Glyma.17G121600 Glycine max HOM05D004216 ORTHO05D004926 4.7e-29 132.5 117 59.8
MD06G1210800 Malus domestica HOM05D004216 ORTHO05D004926 4.7e-29 132.5 253 35.6
Sed0006394 Sechium edule HOM05D004216 ORTHO05D004926 1.8e-28 130.6 252 33.7
FAN13G0239 Fragaria x ananassa HOM05D004216 ORTHO05D004926 2.3e-28 130.2 253 35.6
VMungo1215G1362 Vigna mungo HOM05D004216 ORTHO05D004926 2.3e-28 130.2 116 57.8
CANSAT80G0956 Cannabis sativa HOM05D004216 ORTHO05D004926 3.1e-28 129.8 253 36.0
FAN04G0815 Fragaria x ananassa HOM05D004216 ORTHO05D004926 4.0e-28 129.4 117 56.4
TPR.G26791 Trifolium pratense HOM05D004216 ORTHO05D004926 4.0e-28 129.4 120 57.5
FAN08G0408 Fragaria x ananassa HOM05D004216 ORTHO05D004926 5.2e-28 129.0 253 35.6
FAN18G1390 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.8e-28 128.6 253 35.6
FAN18G2177 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.8e-28 128.6 253 35.6
Lj4g0001448 Lotus japonicus HOM05D004216 ORTHO05D004926 6.8e-28 128.6 253 36.0
FvH4_5g12730 Fragaria vesca HOM05D004216 ORTHO05D004926 1.5e-27 127.5 253 35.6
GSVIVG01008230001 Vitis vinifera HOM05D004216 ORTHO05D004926 1.5e-27 127.5 249 34.9
AT1G73960 Arabidopsis thaliana HOM05D004216 ORTHO05D004926 2.6e-27 126.7 111 55.0
Gohir.D07G042860 Gossypium hirsutum HOM05D004216 ORTHO05D004926 2.6e-27 126.7 248 34.7
Phvul.003G177400 Phaseolus vulgaris HOM05D004216 ORTHO05D004926 2.6e-27 126.7 116 57.8
AL2G33790 Arabidopsis lyrata HOM05D004216 ORTHO05D004926 3.4e-27 126.3 111 55.0
CARHR067070 Cardamine hirsuta HOM05D004216 ORTHO05D004926 3.4e-27 126.3 111 55.0
Aa31LG4G4250 Aethionema arabicum HOM05D004216 ORTHO05D004926 4.4e-27 125.9 111 55.0
Lj9P432G41 Lonicera japonica HOM05D004216 ORTHO05D004926 5.8e-27 125.6 250 34.8
RcHm_v2.0_Chr7g0184581 Rosa chinensis HOM05D004216 ORTHO05D004926 5.8e-27 125.6 256 34.4
Gohir.A07G038666 Gossypium hirsutum HOM05D004216 ORTHO05D004926 7.5e-27 125.2 112 53.6
Duzib205G0916 Durio zibethinus HOM05D004216 ORTHO05D004926 9.8e-27 124.8 249 35.3
Gohir.A07G038732 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.3e-26 124.4 248 34.3
Dinv38590 Davidia involucrata HOM05D004216 ORTHO05D004926 2.2e-26 123.6 247 34.8
Gorai.001G045800 Gossypium raimondii HOM05D004216 ORTHO05D004926 3.7e-26 122.9 248 34.7
Carub.0002s2073 Capsella rubella HOM05D004216 ORTHO05D004926 4.9e-26 122.5 111 53.2
Sp5g29160 Schrenkiella parvula HOM05D004216 ORTHO05D004926 6.4e-26 122.1 111 54.1
Thhalv10018013m.g Eutrema salsugineum HOM05D004216 ORTHO05D004926 8.3e-26 121.7 111 54.1
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 1.9e-25 120.6 248 35.1
Hma1.2p1_0595F.1_g186010 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 1.9e-25 120.6 248 35.1
arahy.Tifrunner.gnm1.ann1.269HHI Arachis hypogaea HOM05D004216 ORTHO05D004926 2.4e-25 120.2 114 55.3
THA.LOC104812129 Tarenaya hassleriana HOM05D004216 ORTHO05D004926 5.4e-25 119.0 244 34.0
Thecc.03G027900 Theobroma cacao HOM05D004216 ORTHO05D004926 9.2e-25 118.2 250 35.6
C06p48070 Brassica napus HOM05D004216 ORTHO05D004926 2.0e-24 117.1 112 54.5
CSS0006085 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 2.7e-24 116.7 246 33.3
CSS0012337 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 2.7e-24 116.7 246 33.3
Rhsim08G0138000 Rhododendron simsii HOM05D004216 ORTHO05D004926 2.7e-24 116.7 247 32.0
Actinidia31032 Actinidia chinensis HOM05D004216 ORTHO05D004926 3.5e-24 116.3 114 51.8
A07p39800 Brassica napus HOM05D004216 ORTHO05D004926 6.0e-24 115.5 112 53.6
BraA07t31527Z Brassica rapa HOM05D004216 ORTHO05D004926 6.0e-24 115.5 112 53.6
BolC6t39842H Brassica oleracea HOM05D004216 ORTHO05D004926 1.0e-23 114.8 112 53.6
Duzib084G0462 Durio zibethinus HOM05D004216 ORTHO05D004926 1.3e-23 114.4 111 50.5
TAR371G0173 Trochodendron aralioides HOM05D004216 ORTHO05D004926 3.9e-23 112.8 245 32.2
Cc04_g07550 Coffea canephora HOM05D004216 ORTHO05D004926 6.6e-23 112.1 247 32.8
DCAR_001432 Daucus carota HOM05D004216 ORTHO05D004926 6.6e-23 112.1 113 48.7
COL.COLO4_22715 Corchorus olitorius HOM05D004216 ORTHO05D004926 3.3e-22 109.8 248 33.9
EL10Ac5g11246 Beta vulgaris HOM05D004216 ORTHO05D004926 5.6e-22 109.0 111 50.5
Hund02527 Selenicereus undatus HOM05D004216 ORTHO05D004926 5.6e-22 109.0 111 50.5
Nn4g23713 Nelumbo nucifera HOM05D004216 ORTHO05D004926 7.3e-22 108.6 117 45.3
Ah.11g047140 Amaranthus hybridus HOM05D004216 ORTHO05D004926 1.6e-21 107.5 111 50.5
unitig_578.g15823 Utricularia gibba HOM05D004216 ORTHO05D004926 1.6e-21 107.5 103 49.5
Sc10g0009590 Simmondsia chinensis HOM05D004216 ORTHO05D004926 2.1e-21 107.1 111 48.6
AUR62036947 Chenopodium quinoa HOM05D004216 ORTHO05D004926 4.7e-21 105.9 117 48.7
HanXRQChr05g0153841 Helianthus annuus HOM05D004216 ORTHO05D004926 6.2e-21 105.5 113 49.6
AUR62032188 Chenopodium quinoa HOM05D004216 ORTHO05D004926 8.1e-21 105.1 114 50.0
SalBow3G4568 Salvia bowleyana HOM05D004216 ORTHO05D004926 1.4e-20 104.4 102 50.0
SGA_v2.0_scaffold13G06699 Striga asiatica HOM05D004216 ORTHO05D004926 1.4e-20 104.4 115 45.2
Migut.J01004 Erythranthe guttata HOM05D004216 ORTHO05D004926 3.1e-20 103.2 111 47.7
ATR0564G329 Amborella trichopoda HOM05D004216 ORTHO05D004926 8.9e-20 101.7 112 44.6
Oeu004769.3 Olea europaea HOM05D004216 ORTHO05D004926 1.2e-19 101.3 111 47.7
MSTRG.5865 Avicennia marina HOM05D004216 ORTHO05D004926 2.0e-19 100.5 115 42.6
Aqoxy3G03901 Aquilegia oxysepala HOM05D004216 ORTHO05D004926 3.4e-19 99.8 100 48.0
Peaxi162Scf00015g00072 Petunia axillaris HOM05D004216 ORTHO05D004926 7.5e-19 98.6 111 45.9
CAN.G438.113 Capsicum annuum HOM05D004216 ORTHO05D004926 9.8e-19 98.2 111 45.9
Lsat_1_v5_gn_5_25060 Lactuca sativa HOM05D004216 ORTHO05D004926 9.8e-19 98.2 219 32.4
Nitab4.5_0001599g0210 Nicotiana tabacum HOM05D004216 ORTHO05D004926 9.8e-19 98.2 111 45.9
Nitab4.5_0000410g0130 Nicotiana tabacum HOM05D004216 ORTHO05D004926 2.2e-18 97.1 111 45.9
Solyc03g119780.4 Solanum lycopersicum HOM05D004216 ORTHO05D004926 2.9e-18 96.7 111 44.1
Sopen03g038630 Solanum pennellii HOM05D004216 ORTHO05D004926 1.9e-17 94.0 247 29.6
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 1.2e-16 91.3 85 45.9
SEGI_35421 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 6.6e-15 85.5 83 50.6
PSO478G4514 Papaver somniferum HOM05D004216 ORTHO05D004926 5.6e-14 82.4 114 43.9
PSO017G0533 Papaver somniferum HOM05D004216 ORTHO05D004926 9.5e-14 81.6 114 43.0
MD14G1221500 Malus domestica HOM05D004216 ORTHO05D004926 1.1e-12 78.2 63 58.7
Os09g0409950 Oryza sativa ssp. japonica HOM05D004216 ORTHO05D004926 5.2e-12 75.9 102 40.2
HPP92_023454 Vanilla planifolia HOM05D004216 ORTHO05D004926 8.9e-12 75.1 104 31.7
HPP92_023478 Vanilla planifolia HOM05D004216 ORTHO05D004926 8.9e-12 75.1 104 31.7
DCAR_023664 Daucus carota HOM05D000415 ORTHO05D006649 3.4e-11 73.2 111 36.9
Zm00001eb312360 Zea mays HOM05D004216 ORTHO05D004926 7.6e-11 72.0 100 35.0
Mapoly0014s0115 Marchantia polymorpha HOM05D004216 ORTHO05D004926 4.6e-08 62.8 106 34.0
ECA246G5151 Erigeron canadensis HOM05D004216 ORTHO05D004926 1.3e-07 61.2 84 42.9


User provided reference genes

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