Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 8.1e-91 337.0 168 100.0
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-73 277.7 197 74.6
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 7.1e-71 270.8 203 71.9
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-70 267.7 192 74.0
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-69 266.9 220 66.4
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-68 260.8 220 65.0
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-67 259.6 220 65.5
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 4.8e-67 258.1 203 69.0
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-64 250.4 218 64.2
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-64 249.6 220 63.2
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-64 249.2 218 63.8
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 5.0e-64 248.1 227 58.6
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-55 219.2 119 93.3
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 7.2e-55 217.6 172 67.4
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-54 215.7 220 57.7
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-54 215.3 213 54.0
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 3.6e-54 215.3 121 90.9
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-51 206.1 230 48.7
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.2e-47 192.2 179 58.1
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-47 191.4 222 47.7
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-47 190.7 223 46.6
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 9.4e-47 190.7 105 91.4
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-47 190.7 105 91.4
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-46 189.9 228 46.1
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-46 189.5 223 46.2
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-46 189.1 229 45.9
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-46 188.7 105 90.5
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-46 188.7 105 89.5
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-46 188.0 98 95.9
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-45 187.2 215 47.9
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-45 186.8 105 89.5
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-45 186.8 105 89.5
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.4e-45 186.8 214 48.1
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-45 186.4 218 47.7
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-45 186.4 105 88.6
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 2.3e-45 186.0 222 46.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-45 185.7 200 50.0
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-45 184.9 218 47.7
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-45 184.5 223 45.7
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 7.4e-44 181.0 100 91.0
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-43 179.9 100 90.0
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 3.7e-43 178.7 120 73.3
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 5.9e-41 171.4 121 77.7
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-40 169.1 118 76.3
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-40 167.9 91 93.4
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 6.5e-40 167.9 123 69.9
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-40 167.5 169 51.5
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.0e-38 161.0 107 73.8
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-37 159.8 116 62.1
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-37 158.7 186 48.4
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-37 158.7 121 74.4
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.7e-37 157.9 210 41.4
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.6e-36 156.0 211 40.8
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-35 153.7 124 61.3
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 2.8e-35 152.5 124 63.7
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-35 151.4 187 46.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-34 150.6 213 39.0
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-34 150.2 150 54.0
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-34 150.2 101 72.3
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-32 143.7 171 48.5
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-32 141.7 103 72.8
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.9e-31 139.8 197 39.1
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.6e-30 136.7 186 43.5
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-29 134.0 160 47.5
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-29 131.3 95 71.6
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 6.8e-29 131.3 212 37.3
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.2e-28 130.6 211 37.4
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-27 126.7 219 35.6
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-27 126.7 101 62.4
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 8.3e-27 124.4 197 36.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-26 122.5 102 56.9
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 4.1e-26 122.1 63 93.7
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-26 121.7 108 59.3
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.2e-25 120.6 96 58.3
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 1.7e-24 116.7 119 53.8
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.1e-23 114.0 102 60.8
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-23 113.6 124 51.6
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 1.5e-23 113.6 129 46.5
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-23 112.5 91 69.2
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.2e-23 112.1 179 33.5
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.2e-22 110.5 213 31.9
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.1e-22 109.8 92 53.3
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-21 106.3 221 33.5
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-20 104.0 117 52.1
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-20 103.2 207 33.3
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.3e-19 100.5 83 60.2
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.2e-17 94.0 146 44.5
SHI29049 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-17 94.0 96 54.2
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 2.0e-17 93.2 202 31.7
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 2.7e-17 92.8 104 46.2
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 7.7e-17 91.3 95 48.4
CSS0010788 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.3e-16 89.7 54 74.1
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-16 88.2 125 46.4
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-15 87.4 206 30.1
Cpa.g.sc3.333 Carica papaya HOM05D000002 ORTHO05D004433 2.5e-15 86.3 132 43.2
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 2.5e-15 86.3 82 51.2
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.3e-15 85.5 71 57.7
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-14 82.8 51 76.5
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 4.7e-14 82.0 130 38.5
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 8.0e-14 81.3 74 51.4
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 8.0e-14 81.3 36 97.2
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-13 80.5 65 61.5
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-13 80.5 103 46.6
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-13 80.1 36 97.2
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-13 79.7 36 94.4
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-13 79.7 36 94.4
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-13 79.7 36 94.4
Sed0004206 Sechium edule HOM05D000002 ORTHO05D004433 2.3e-13 79.7 101 48.5
SHI07420 Sapria himalayana HOM05D000002 ORTHO05D004433 3.0e-13 79.3 68 54.4
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 4.0e-13 79.0 72 51.4
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.2e-13 78.6 111 38.7
SHI12029 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-13 78.2 67 59.7
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 8.9e-13 77.8 36 91.7
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-12 77.4 36 91.7
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-12 77.4 36 91.7
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.0e-12 76.6 194 29.9
SHI08990 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-12 76.6 49 75.5
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-12 76.6 36 94.4
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.0e-12 76.6 76 51.3
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 3.4e-12 75.9 94 41.5
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-12 74.7 36 91.7
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 1.7e-11 73.6 36 83.3
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-11 71.6 151 32.5
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-10 70.9 62 61.3
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 1.8e-10 70.1 70 48.6
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 2.4e-10 69.7 36 80.6
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 3.2e-10 69.3 36 77.8
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-10 69.3 163 28.2
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 4.1e-10 68.9 79 43.0
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 5.4e-10 68.6 63 55.6
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 5.4e-10 68.6 77 45.5
SHI05544 Sapria himalayana HOM05D000002 ORTHO05D004433 7.0e-10 68.2 105 42.9
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 9.2e-10 67.8 36 75.0
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-09 67.4 36 72.2
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 1.2e-09 67.4 63 52.4
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 2.0e-09 66.6 87 36.8
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 3.5e-09 65.9 58 55.2
Oeu044197.1 Olea europaea HOM05D000002 ORTHO05D004433 3.5e-09 65.9 68 48.5
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 4.6e-09 65.5 113 31.9
Oeu010596.1 Olea europaea HOM05D000002 ORTHO05D004433 4.6e-09 65.5 65 49.2
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 4.6e-09 65.5 68 51.5
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 4.6e-09 65.5 49 59.2
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 4.6e-09 65.5 104 40.4
SHI05546 Sapria himalayana HOM05D000002 ORTHO05D004433 5.9e-09 65.1 105 41.0
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-09 64.7 78 46.2
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-08 63.9 60 50.0
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 3.9e-08 62.4 64 48.4
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.9e-08 62.4 63 49.2
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 5.0e-08 62.0 36 75.0
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 5.0e-08 62.0 60 51.7
CANSAT80G2738 Cannabis sativa HOM05D000073 ORTHO05D000033 1.1e-07 60.8 51 62.7
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 1.9e-07 60.1 36 72.2
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 1.9e-07 60.1 146 30.1
PGSC0003DMG400034324 Solanum tuberosum HOM05D000002 ORTHO05D004433 5.6e-07 58.5 81 35.8
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.3e-07 58.2 144 26.4
SHI03826 Sapria himalayana HOM05D000002 ORTHO05D004433 7.3e-07 58.2 39 69.2
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.2e-06 57.4 76 46.1
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-06 57.0 50 54.0
CsaV3_6G015590 Cucumis sativus L. HOM05D000002 ORTHO05D004433 3.6e-06 55.8 57 45.6
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 8.0e-06 54.7 141 29.8


User provided reference genes

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