Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 3.3e-270 934.5 481 100.0
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 5.1e-122 442.2 260 88.1
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 6.7e-106 388.7 260 80.8
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 9.7e-105 384.8 261 78.5
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.1e-100 371.3 262 76.7
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 6.1e-99 365.5 308 63.3
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 2.3e-98 363.6 260 70.0
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.3e-98 363.6 308 63.6
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 5.2e-98 362.5 260 70.0
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 5.2e-98 362.5 260 70.0
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-97 361.3 259 69.9
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 1.5e-97 360.9 260 69.6
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 2.0e-97 360.5 260 69.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-97 360.5 259 69.5
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 2.0e-97 360.5 260 69.6
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 2.0e-97 360.5 260 69.6
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 3.3e-97 359.8 259 69.5
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 5.7e-97 359.0 260 69.2
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 7.4e-97 358.6 260 69.2
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 7.4e-97 358.6 307 63.2
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 7.4e-97 358.6 263 68.4
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 9.7e-97 358.2 260 69.2
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 9.7e-97 358.2 260 69.2
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.7e-96 357.5 260 69.6
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.7e-96 357.5 260 69.6
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.7e-96 357.5 260 69.6
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 2.8e-96 356.7 268 67.9
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 6.3e-96 355.5 260 68.8
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.1e-95 354.8 268 67.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.1e-95 354.8 269 66.9
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.4e-95 353.6 260 68.8
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 2.4e-95 353.6 261 68.2
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 4.5e-94 349.4 262 67.6
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.5e-94 349.4 271 64.2
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.2e-93 347.1 261 69.0
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 3.8e-93 346.3 263 65.0
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.5e-93 345.5 261 69.0
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 6.5e-93 345.5 261 69.0
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 6.5e-93 345.5 263 67.3
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.1e-92 344.7 263 66.5
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.1e-92 344.7 260 67.3
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.1e-92 344.7 264 67.8
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.5e-92 344.4 262 67.2
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.5e-92 344.4 262 66.8
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.9e-92 344.0 261 68.6
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 2.5e-92 343.6 263 66.5
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 2.5e-92 343.6 263 65.0
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.2e-92 343.2 261 68.6
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 3.2e-92 343.2 267 65.2
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.2e-92 342.8 262 66.8
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 5.5e-92 342.4 259 67.2
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.5e-92 342.4 261 67.8
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 5.5e-92 342.4 260 65.4
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 7.2e-92 342.0 261 68.2
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.6e-91 340.9 262 65.6
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.6e-91 340.9 262 66.0
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 1.6e-91 340.9 261 66.3
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 1.6e-91 340.9 259 66.8
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 8.0e-91 338.6 262 66.0
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.0e-90 338.2 262 66.4
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.4e-90 337.8 266 65.8
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.8e-90 337.4 264 67.4
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.3e-90 337.0 260 65.8
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.3e-90 337.0 262 64.5
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.3e-90 337.0 261 65.5
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 2.3e-90 337.0 261 64.8
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 2.3e-90 337.0 261 64.8
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 3.0e-90 336.7 264 65.2
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 3.0e-90 336.7 260 65.4
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 3.0e-90 336.7 260 65.4
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 5.2e-90 335.9 264 64.8
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 5.2e-90 335.9 265 64.2
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 6.8e-90 335.5 262 65.3
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 6.8e-90 335.5 261 66.3
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 8.8e-90 335.1 264 65.2
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 1.2e-89 334.7 260 65.8
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.2e-89 334.7 260 64.6
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.2e-89 334.7 261 65.1
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.5e-89 334.3 262 64.9
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-89 334.0 264 64.8
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 2.0e-89 334.0 264 64.4
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.6e-89 333.6 261 63.6
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 2.6e-89 333.6 252 67.1
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.4e-89 332.8 262 64.9
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.4e-89 332.8 262 64.9
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 5.7e-89 332.4 261 66.7
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.7e-89 332.4 263 65.4
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 7.5e-89 332.0 264 65.5
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 7.5e-89 332.0 261 64.8
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 7.5e-89 332.0 262 64.5
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 9.8e-89 331.6 263 72.2
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-88 331.3 267 64.0
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.7e-88 330.9 267 64.0
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 2.2e-88 330.5 264 65.5
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 2.2e-88 330.5 254 66.1
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 2.8e-88 330.1 264 64.4
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 2.8e-88 330.1 261 65.1
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 4.8e-88 329.3 268 63.4
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 6.3e-88 328.9 264 64.0
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 6.3e-88 328.9 262 64.1
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 6.3e-88 328.9 261 65.1
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.1e-87 328.2 266 62.4
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.1e-87 328.2 266 62.4
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.4e-87 327.8 264 63.3
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.4e-87 327.8 261 64.8
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.4e-87 327.8 261 64.4
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 1.4e-87 327.8 254 65.4
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.4e-87 327.8 258 67.1
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.8e-87 327.4 267 64.8
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.8e-87 327.4 261 64.4
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.4e-87 327.0 260 65.0
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 3.1e-87 326.6 262 63.0
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 3.1e-87 326.6 261 64.0
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.0e-87 325.5 251 65.7
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.0e-87 325.5 251 65.7
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.1e-87 325.1 251 65.7
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 1.2e-86 324.7 256 66.0
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.6e-86 324.3 264 64.0
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 1.6e-86 324.3 251 65.3
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.6e-86 324.3 264 62.9
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.5e-86 323.2 251 65.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 1.6e-83 314.3 268 62.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 2.1e-83 313.9 263 63.9
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 6.1e-83 312.4 267 60.7
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 8.0e-83 312.0 258 61.6
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 1.4e-82 311.2 266 63.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.8e-82 310.8 261 60.9
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 4.0e-82 309.7 261 60.5
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 4.0e-82 309.7 267 59.9
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.2e-82 309.3 265 61.5
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.2e-80 303.9 268 60.1
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.1e-79 300.1 260 61.9
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 3.1e-79 300.1 252 61.1
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 7.0e-79 298.9 266 58.3
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.6e-78 297.7 250 62.0
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 4.5e-78 296.2 266 59.4
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 3.3e-76 290.0 257 58.4
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 1.2e-73 281.6 264 54.2
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.4e-73 280.0 253 58.9
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 7.5e-73 278.9 256 58.6
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.7e-72 277.7 257 56.4
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.2e-72 277.3 257 56.0
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 3.7e-72 276.6 267 55.8
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.4e-71 274.6 267 56.9
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-69 268.5 224 60.3
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.5e-68 264.6 267 54.7
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 5.2e-66 256.1 258 54.3
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 9.8e-65 251.9 264 53.4
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.1e-63 248.4 191 66.0
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 7.5e-57 225.7 222 51.8
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.7e-56 224.6 171 67.3
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 3.7e-48 196.8 140 68.6
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 7.8e-46 189.1 264 43.6
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 7.3e-44 182.6 156 60.3
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.2e-43 181.8 162 57.4
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 3.0e-37 160.6 123 64.2
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 6.2e-35 152.9 135 58.5
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 6.4e-24 116.3 308 29.2
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 1.1e-20 105.5 86 59.3
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 1.5e-20 105.1 106 49.1
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 9.6e-20 102.4 68 76.5
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 1.3e-19 102.1 66 78.8
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-18 99.0 100 48.0
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 3.1e-18 97.4 100 46.0
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 7.9e-14 82.8 89 44.9
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 5.5e-07 60.1 165 30.9
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.2e-06 58.9 89 40.4


User provided reference genes

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