Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 6.9e-173 610.5 306 100.0
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.7e-86 323.6 317 56.2
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 4.2e-85 318.9 317 54.6
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 2.7e-84 316.2 319 53.0
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 2.7e-84 316.2 319 53.3
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 3.5e-84 315.8 318 52.8
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 4.6e-84 315.5 319 52.7
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 4.6e-84 315.5 319 52.7
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.7e-83 313.5 319 53.0
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 6.2e-81 305.1 311 53.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.4e-80 303.9 364 49.2
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 4.0e-80 302.4 319 52.7
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 4.0e-80 302.4 325 51.4
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 6.9e-80 301.6 317 51.7
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 6.9e-80 301.6 319 48.9
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 9.0e-80 301.2 318 49.4
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.5e-79 300.4 317 52.1
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.5e-79 300.4 317 51.1
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 2.0e-79 300.1 320 51.2
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 2.0e-79 300.1 324 50.6
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 7.6e-79 298.1 323 50.8
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.7e-78 297.0 319 49.2
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 6.4e-78 295.0 315 50.5
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 4.2e-77 292.4 324 48.5
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.1e-76 290.0 306 52.0
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.1e-76 290.0 320 50.9
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 4.6e-76 288.9 320 50.3
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 4.6e-76 288.9 321 49.2
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.0e-75 287.7 318 49.4
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 1.3e-75 287.3 318 49.1
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.3e-75 287.3 317 50.8
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.8e-75 287.0 316 50.9
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 3.0e-75 286.2 320 50.3
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 3.9e-75 285.8 309 50.2
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 8.7e-75 284.6 314 50.3
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 8.7e-75 284.6 322 50.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 1.5e-74 283.9 310 49.7
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 1.5e-74 283.9 326 48.5
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.5e-74 283.1 316 49.1
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 5.6e-74 282.0 325 49.8
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 5.6e-74 282.0 317 48.9
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 9.6e-74 281.2 318 50.3
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 9.6e-74 281.2 318 49.7
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 1.6e-73 280.4 329 47.4
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 8.1e-73 278.1 326 49.1
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.4e-72 277.3 310 50.0
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.8e-72 276.9 324 48.8
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.8e-72 276.9 317 48.6
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 2.4e-72 276.6 319 48.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 3.1e-72 276.2 314 46.5
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 4.0e-72 275.8 324 47.5
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 1.5e-71 273.9 317 49.5
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 2.6e-71 273.1 312 44.6
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.5e-71 272.3 310 49.0
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.3e-70 270.8 314 47.8
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.3e-70 270.8 311 48.9
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 1.3e-70 270.8 310 48.4
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 1.3e-70 270.8 317 47.6
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 3.8e-70 269.2 319 46.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 8.4e-70 268.1 316 47.8
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 8.4e-70 268.1 316 47.5
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 8.4e-70 268.1 316 48.4
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.4e-69 267.3 319 47.0
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 3.2e-69 266.2 311 47.9
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 5.5e-69 265.4 324 45.4
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.2e-68 264.2 314 47.8
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.6e-68 263.8 311 48.6
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 2.7e-68 263.1 311 47.9
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 1.3e-67 260.8 310 46.5
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.3e-67 260.8 317 48.3
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.3e-67 260.0 314 47.5
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 3.0e-67 259.6 320 46.2
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 6.7e-67 258.5 313 47.9
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.9e-66 256.9 316 45.9
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.3e-66 256.1 318 44.7
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 9.6e-66 254.6 317 45.1
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 1.3e-65 254.2 309 46.0
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 6.2e-65 251.9 317 45.4
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.5e-63 247.3 307 48.2
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 2.0e-63 246.9 319 45.8
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 3.4e-63 246.1 313 45.0
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 4.5e-63 245.7 317 46.7
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.9e-62 243.0 401 40.4
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.2e-60 237.7 319 42.9
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.0e-59 234.6 333 42.9
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 3.9e-59 232.6 310 46.1
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.9e-58 230.3 337 41.5
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 8.2e-57 224.9 247 49.8
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 8.2e-57 224.9 310 45.8
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.1e-56 224.6 445 36.0
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.4e-56 224.2 264 46.2
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 1.3e-54 217.6 321 41.1
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 6.5e-54 215.3 259 47.5
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 2.5e-53 213.4 292 43.2
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 4.2e-53 212.6 270 44.8
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 7.2e-53 211.8 311 43.4
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 2.7e-52 209.9 278 44.2
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 3.6e-52 209.5 329 38.9
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.8e-51 207.2 340 37.6
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 9.7e-50 201.4 254 43.7
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 9.7e-50 201.4 234 47.9
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 1.1e-48 198.0 230 48.7
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 9.1e-48 194.9 341 37.8
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 5.9e-47 192.2 255 44.3
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.8e-46 189.5 316 37.7
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.9e-45 187.2 223 44.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 4.2e-45 186.0 297 38.4
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.2e-44 184.5 307 36.8
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.4e-43 181.0 320 35.6
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.8e-43 180.6 337 33.2
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.0e-43 179.9 287 39.7
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.0e-42 177.2 259 40.9
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 4.4e-42 176.0 326 36.5
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.3e-41 174.5 163 55.2
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.2e-39 167.9 427 32.1
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 5.9e-39 165.6 325 34.8
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 1.0e-38 164.9 308 35.4
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 4.7e-36 156.0 282 36.2
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 6.7e-35 152.1 311 34.4
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 4.5e-31 139.4 206 40.3
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 5.0e-30 136.0 236 39.4
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 8.8e-27 125.2 243 35.8
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.8e-16 90.9 55 76.4
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.3e-09 68.2 53 60.4
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.3e-09 68.2 53 60.4
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.3e-06 58.2 49 59.2


User provided reference genes

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