Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18707 Sapria himalayana HOM05D004621 ORTHO05D005817 2.0e-74 282.3 145 100.0
Ciclev10010180m.g Citrus clementina HOM05D004621 ORTHO05D005817 2.4e-30 136.0 92 69.6
Manes.16G083500 Manihot esculenta HOM05D004621 ORTHO05D005817 1.5e-29 133.3 120 58.3
Potri.006G224000 Populus trichocarpa HOM05D004621 ORTHO05D005817 1.5e-29 133.3 111 59.5
Sabra06G0173000 Salix brachista HOM05D004621 ORTHO05D005817 1.5e-29 133.3 111 60.4
RcHm_v2.0_Chr6g0311441 Rosa chinensis HOM05D004621 ORTHO05D005817 2.0e-29 132.9 110 58.2
Ah.10g034040 Amaranthus hybridus HOM05D004621 ORTHO05D005817 2.6e-29 132.5 111 60.4
CANSAT21G1762 Cannabis sativa HOM05D004621 ORTHO05D005817 2.6e-29 132.5 113 59.3
FvH4_2g31380 Fragaria vesca HOM05D004621 ORTHO05D005817 2.6e-29 132.5 110 59.1
FAN24G3059 Fragaria x ananassa HOM05D004621 ORTHO05D005817 2.6e-29 132.5 110 59.1
Nn6g35569 Nelumbo nucifera HOM05D004621 ORTHO05D005817 4.5e-29 131.7 97 63.9
Dinv12464 Davidia involucrata HOM05D004621 ORTHO05D005817 5.8e-29 131.3 99 64.6
PSO210G1875 Papaver somniferum HOM05D004621 ORTHO05D005817 5.8e-29 131.3 115 56.5
Phvul.009G080100 Phaseolus vulgaris HOM05D004621 ORTHO05D005817 7.6e-29 131.0 92 64.1
Thecc.09G059300 Theobroma cacao HOM05D004621 ORTHO05D005817 7.6e-29 131.0 112 59.8
FAN15G0359 Fragaria x ananassa HOM05D004621 ORTHO05D005817 9.9e-29 130.6 110 58.2
MD15G1053900 Malus domestica HOM05D004621 ORTHO05D005817 9.9e-29 130.6 110 56.4
SalBow4G1696 Salvia bowleyana HOM05D004621 ORTHO05D005817 9.9e-29 130.6 129 55.8
Sc09g0009980 Simmondsia chinensis HOM05D004621 ORTHO05D005817 9.9e-29 130.6 98 67.3
FAN27G1750 Fragaria x ananassa HOM05D004621 ORTHO05D005817 1.3e-28 130.2 110 58.2
PSO210G2988 Papaver somniferum HOM05D004621 ORTHO05D005817 2.2e-28 129.4 115 56.5
Cc08_g11070 Coffea canephora HOM05D004621 ORTHO05D005817 2.9e-28 129.0 106 62.3
FAN20G0813 Fragaria x ananassa HOM05D004621 ORTHO05D005817 3.8e-28 128.6 110 58.2
Lj8A491T35 Lonicera japonica HOM05D004621 ORTHO05D005817 3.8e-28 128.6 92 66.3
COL.COLO4_21108 Corchorus olitorius HOM05D004621 ORTHO05D005817 4.9e-28 128.3 111 57.7
Hund19431 Selenicereus undatus HOM05D004621 ORTHO05D005817 4.9e-28 128.3 125 52.8
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea HOM05D004621 ORTHO05D005817 6.4e-28 127.9 92 62.0
arahy.Tifrunner.gnm1.ann1.T7L0BR Arachis hypogaea HOM05D004621 ORTHO05D005817 6.4e-28 127.9 92 62.0
Rhsim05G0135500 Rhododendron simsii HOM05D004621 ORTHO05D005817 6.4e-28 127.9 98 63.3
Lalb_Chr11g0063251 Lupinus albus HOM05D004621 ORTHO05D005817 8.4e-28 127.5 92 60.9
Migut.A00101 Erythranthe guttata HOM05D004621 ORTHO05D005817 1.1e-27 127.1 115 56.5
Duzib168G0020 Durio zibethinus HOM05D004621 ORTHO05D005817 1.4e-27 126.7 108 59.3
Lj8A495T43 Lonicera japonica HOM05D004621 ORTHO05D005817 1.4e-27 126.7 117 58.1
THA.LOC104811228 Tarenaya hassleriana HOM05D004621 ORTHO05D005817 1.4e-27 126.7 113 57.5
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 1.4e-27 126.7 115 57.4
Eucgr.C00676 Eucalyptus grandis HOM05D004621 ORTHO05D005817 1.9e-27 126.3 112 52.7
QL02p000390 Quercus lobata HOM05D004621 ORTHO05D005817 1.9e-27 126.3 92 64.1
TWI32G0723 Tripterygium wilfordii HOM05D004621 ORTHO05D005817 1.9e-27 126.3 98 63.3
VMungo1309G3014 Vigna mungo HOM05D004621 ORTHO05D005817 1.9e-27 126.3 92 60.9
Psat5g035360 Pisum sativum HOM05D004621 ORTHO05D005817 2.4e-27 125.9 92 65.2
TPR.G3533 Trifolium pratense HOM05D004621 ORTHO05D005817 2.4e-27 125.9 92 65.2
Prupe.1G407400 Prunus persica HOM05D004621 ORTHO05D005817 3.2e-27 125.6 110 55.5
GSVIVG01035427001 Vitis vinifera HOM05D004621 ORTHO05D005817 3.2e-27 125.6 98 61.2
Gohir.A05G040100 Gossypium hirsutum HOM05D004621 ORTHO05D005817 4.2e-27 125.2 92 64.1
Gohir.D05G041600 Gossypium hirsutum HOM05D004621 ORTHO05D005817 4.2e-27 125.2 92 64.1
Gorai.009G042200 Gossypium raimondii HOM05D004621 ORTHO05D005817 4.2e-27 125.2 92 64.1
Hma1.2p1_0196F.1_g084950 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 4.2e-27 125.2 99 60.6
Hma1.2p1_0231F.1_g097600 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 4.2e-27 125.2 99 60.6
Atru.chr7.1890 Acer truncatum HOM05D004621 ORTHO05D005817 5.5e-27 124.8 123 55.3
Atru.chr7.1918 Acer truncatum HOM05D004621 ORTHO05D005817 5.5e-27 124.8 123 55.3
Haze_18137 Corylus avellana HOM05D004621 ORTHO05D005817 5.5e-27 124.8 120 55.0
Glyma.06G054600 Glycine max HOM05D004621 ORTHO05D005817 5.5e-27 124.8 92 58.7
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 7.1e-27 124.4 107 58.9
Aqoxy2G03981 Aquilegia oxysepala HOM05D004621 ORTHO05D005817 9.3e-27 124.0 114 57.9
Glyma.04G054300 Glycine max HOM05D004621 ORTHO05D005817 9.3e-27 124.0 92 57.6
HPP92_023996 Vanilla planifolia HOM05D004621 ORTHO05D005817 9.3e-27 124.0 95 60.0
Ca_15845_v3 Cicer arietinum L. HOM05D004621 ORTHO05D005817 1.2e-26 123.6 92 62.0
PGR031G3863 Punica granatum HOM05D004621 ORTHO05D005817 1.2e-26 123.6 113 61.9
FAN17G2977 Fragaria x ananassa HOM05D004621 ORTHO05D005817 1.6e-26 123.2 100 58.0
Cfa017997 Carpinus fangiana HOM05D004621 ORTHO05D005817 2.1e-26 122.9 120 54.2
Thhalv10004076m.g Eutrema salsugineum HOM05D004621 ORTHO05D005817 2.1e-26 122.9 107 57.0
Lj1g0023758 Lotus japonicus HOM05D004621 ORTHO05D005817 2.1e-26 122.9 92 60.9
HanXRQChr10g0309801 Helianthus annuus HOM05D004621 ORTHO05D005817 2.7e-26 122.5 120 55.0
SGA_v2.0_scaffold20G09183 Striga asiatica HOM05D004621 ORTHO05D005817 2.7e-26 122.5 129 52.7
AUR62009103 Chenopodium quinoa HOM05D004621 ORTHO05D005817 3.5e-26 122.1 98 56.1
unitig_88.g27672 Utricularia gibba HOM05D004621 ORTHO05D005817 3.5e-26 122.1 107 57.0
MSTRG.25978 Avicennia marina HOM05D004621 ORTHO05D005817 4.6e-26 121.7 98 57.1
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-26 121.3 118 55.9
Sp2g21560 Schrenkiella parvula HOM05D004621 ORTHO05D005817 6.0e-26 121.3 109 55.0
Zm00001eb240170 Zea mays HOM05D004621 ORTHO05D005817 6.0e-26 121.3 127 53.5
AUR62020569 Chenopodium quinoa HOM05D004621 ORTHO05D005817 7.9e-26 120.9 98 55.1
MBI05_g23629_MAGBIO Magnolia biondii HOM05D004621 ORTHO05D005817 7.9e-26 120.9 106 56.6
Nitab4.5_0009148g0020 Nicotiana tabacum HOM05D004621 ORTHO05D005817 7.9e-26 120.9 127 52.8
HPP92_023989 Vanilla planifolia HOM05D004621 ORTHO05D005817 7.9e-26 120.9 95 58.9
Medtr3g104760 Medicago truncatula HOM05D004621 ORTHO05D005817 1.0e-25 120.6 92 58.7
Nitab4.5_0000286g0110 Nicotiana tabacum HOM05D004621 ORTHO05D005817 1.0e-25 120.6 127 52.8
Aa31LG1G21020 Aethionema arabicum HOM05D004621 ORTHO05D005817 1.3e-25 120.2 109 56.0
Carub.0006s2397 Capsella rubella HOM05D004621 ORTHO05D005817 1.8e-25 119.8 122 52.5
Cpa.g.sc126.50 Carica papaya HOM05D004621 ORTHO05D005817 1.8e-25 119.8 92 58.7
AL6G38190 Arabidopsis lyrata HOM05D004621 ORTHO05D005817 3.0e-25 119.0 92 59.8
EL10Ac2g03807 Beta vulgaris HOM05D004621 ORTHO05D005817 3.0e-25 119.0 116 53.4
A09p05980 Brassica napus HOM05D004621 ORTHO05D005817 3.0e-25 119.0 117 54.7
BcaC03g17845 Brassica carinata HOM05D004621 ORTHO05D005817 5.1e-25 118.2 109 54.1
C02p58840 Brassica napus HOM05D004621 ORTHO05D005817 5.1e-25 118.2 109 54.1
BolC2t11942H Brassica oleracea HOM05D004621 ORTHO05D005817 5.1e-25 118.2 109 54.1
CARHR187480 Cardamine hirsuta HOM05D004621 ORTHO05D005817 5.1e-25 118.2 92 59.8
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 5.1e-25 118.2 125 52.8
Peaxi162Scf01253g00025 Petunia axillaris HOM05D004621 ORTHO05D005817 5.1e-25 118.2 128 50.8
A02p39240 Brassica napus HOM05D004621 ORTHO05D005817 6.7e-25 117.9 109 53.2
BraA02t08889Z Brassica rapa HOM05D004621 ORTHO05D005817 6.7e-25 117.9 109 53.2
BraA09t36240Z Brassica rapa HOM05D004621 ORTHO05D005817 6.7e-25 117.9 117 53.8
Oeu018033.1 Olea europaea HOM05D004621 ORTHO05D005817 1.5e-24 116.7 119 52.1
BcaC04g23605 Brassica carinata HOM05D004621 ORTHO05D005817 1.9e-24 116.3 109 54.1
BolC9t53577H Brassica oleracea HOM05D004621 ORTHO05D005817 1.9e-24 116.3 109 54.1
BcaB04g19746 Brassica carinata HOM05D004621 ORTHO05D005817 2.5e-24 115.9 118 52.5
ClCG05G018120 Citrullus lanatus HOM05D004621 ORTHO05D005817 2.5e-24 115.9 107 54.2
PGSC0003DMG400008208 Solanum tuberosum HOM05D004621 ORTHO05D005817 2.5e-24 115.9 116 50.9
AT5G26180 Arabidopsis thaliana HOM05D004621 ORTHO05D005817 4.3e-24 115.2 92 60.9
ATR0051G016 Amborella trichopoda HOM05D004621 ORTHO05D005817 5.6e-24 114.8 115 53.0
C09p06540 Brassica napus HOM05D004621 ORTHO05D005817 5.6e-24 114.8 109 53.2
Sed0025089 Sechium edule HOM05D004621 ORTHO05D005817 5.6e-24 114.8 98 57.1
CsaV3_4G035890 Cucumis sativus L. HOM05D004621 ORTHO05D005817 7.4e-24 114.4 108 51.9
BcaB07g29951 Brassica carinata HOM05D004621 ORTHO05D005817 9.6e-24 114.0 113 51.3
DCAR_007741 Daucus carota HOM05D004621 ORTHO05D005817 9.6e-24 114.0 108 53.7
MELO3C016896.2 Cucumis melo HOM05D004621 ORTHO05D005817 2.1e-23 112.8 120 49.2
Solyc08g062560.4 Solanum lycopersicum HOM05D004621 ORTHO05D005817 8.2e-23 110.9 116 48.3
Sopen08g017990 Solanum pennellii HOM05D004621 ORTHO05D005817 8.2e-23 110.9 116 48.3
SEGI_04699 Sequoiadendron giganteum HOM05D004621 ORTHO05D005817 1.8e-22 109.8 92 56.5
BcaB07g29949 Brassica carinata HOM05D004621 ORTHO05D005817 6.5e-20 101.3 108 48.1
vmacro19714 Vaccinium macrocarpon HOM05D004621 ORTHO05D005817 1.1e-19 100.5 124 47.6
BcaB04g19747 Brassica carinata HOM05D004621 ORTHO05D005817 6.7e-17 91.3 80 56.2
Atru.chr7.1917 Acer truncatum HOM05D004621 ORTHO05D005817 6.9e-14 81.3 104 44.2
Atru.chr7.1889 Acer truncatum HOM05D004621 ORTHO05D005817 2.6e-13 79.3 104 43.3
CSS0016381 Camellia sinensis var. sinensis HOM05D004621 ORTHO05D005817 3.4e-13 79.0 66 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3331 Anthoceros agrestis HOM05D004621 ORTHO05D005817 7.7e-13 77.8 86 46.5
SMO169G0045 Selaginella moellendorffii HOM05D004621 ORTHO05D005817 3.8e-12 75.5 92 45.7
CBR_g41718 Chara braunii HOM05D004621 ORTHO05D005817 8.5e-12 74.3 84 45.2
Pp3c1_12750 Physcomitrium patens HOM05D004621 ORTHO05D005817 1.4e-11 73.6 85 41.2
Mapoly0057s0032 Marchantia polymorpha HOM05D004621 ORTHO05D005817 2.5e-11 72.8 99 41.4


User provided reference genes

Program Settings