Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18664 Sapria himalayana HOM05D003951 ORTHO05D020105 2.7e-94 348.6 168 100.0
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 6.3e-19 98.2 136 42.6
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 4.1e-18 95.5 136 43.4
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 5.4e-18 95.1 141 40.4
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 7.0e-18 94.7 140 42.1
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 2.0e-17 93.2 137 43.1
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 2.7e-17 92.8 137 40.9
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 3.5e-17 92.4 137 43.1
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 3.5e-17 92.4 140 40.0
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 3.5e-17 92.4 136 42.6
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 4.5e-17 92.0 140 43.6
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 4.5e-17 92.0 136 41.2
BolC3t13097H Brassica oleracea HOM05D003951 ORTHO05D020105 5.9e-17 91.7 151 41.1
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 5.9e-17 91.7 138 41.3
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 5.9e-17 91.7 136 41.2
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 7.7e-17 91.3 137 42.3
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 7.7e-17 91.3 136 43.4
C03p05850 Brassica napus HOM05D003951 ORTHO05D020105 1.3e-16 90.5 151 41.1
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 1.3e-16 90.5 140 42.1
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 1.3e-16 90.5 138 40.6
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 1.7e-16 90.1 136 41.9
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 1.7e-16 90.1 136 42.6
BcaB01g05472 Brassica carinata HOM05D003951 ORTHO05D020105 2.3e-16 89.7 146 41.1
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 2.3e-16 89.7 136 41.9
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 2.9e-16 89.4 140 40.0
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 2.9e-16 89.4 138 39.1
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 2.9e-16 89.4 137 40.9
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 2.9e-16 89.4 137 41.6
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 2.9e-16 89.4 137 40.9
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 2.9e-16 89.4 136 41.9
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 3.8e-16 89.0 137 40.9
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 3.8e-16 89.0 136 42.6
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 3.8e-16 89.0 138 39.9
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 3.8e-16 89.0 138 39.1
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 5.0e-16 88.6 141 41.1
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 5.0e-16 88.6 141 41.1
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 5.0e-16 88.6 141 41.1
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 5.0e-16 88.6 138 40.6
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 5.0e-16 88.6 137 38.7
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 5.0e-16 88.6 140 41.4
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 5.0e-16 88.6 136 41.2
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 5.0e-16 88.6 136 42.6
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 5.0e-16 88.6 138 41.3
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 6.6e-16 88.2 140 41.4
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 6.6e-16 88.2 137 40.9
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 6.6e-16 88.2 137 41.6
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 6.6e-16 88.2 137 40.1
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 6.6e-16 88.2 137 40.9
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 8.6e-16 87.8 140 37.1
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 8.6e-16 87.8 141 40.4
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 8.6e-16 87.8 137 40.1
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 8.6e-16 87.8 143 37.8
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 8.6e-16 87.8 143 37.8
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 8.6e-16 87.8 137 40.9
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 8.6e-16 87.8 137 40.1
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 8.6e-16 87.8 137 40.9
TAR626G1232 Trochodendron aralioides HOM05D003951 ORTHO05D005378 8.6e-16 87.8 136 39.0
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 1.1e-15 87.4 141 40.4
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 1.1e-15 87.4 137 41.6
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 1.1e-15 87.4 137 38.0
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 1.1e-15 87.4 137 40.1
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 1.1e-15 87.4 137 39.4
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 1.1e-15 87.4 138 39.1
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 1.1e-15 87.4 141 41.8
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 1.1e-15 87.4 138 39.1
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 1.1e-15 87.4 137 40.1
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 1.5e-15 87.0 143 40.6
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.5e-15 87.0 143 40.6
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 1.5e-15 87.0 136 39.7
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 1.5e-15 87.0 136 42.6
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 1.9e-15 86.7 137 40.9
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 1.9e-15 86.7 137 40.9
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 1.9e-15 86.7 135 40.0
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 1.9e-15 86.7 136 39.7
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 1.9e-15 86.7 138 38.4
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 1.9e-15 86.7 137 39.4
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.9e-15 86.7 143 39.9
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.9e-15 86.7 143 40.6
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 1.9e-15 86.7 144 38.9
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 2.5e-15 86.3 141 40.4
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 2.5e-15 86.3 141 40.4
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 2.5e-15 86.3 141 40.4
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 2.5e-15 86.3 136 38.2
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.5e-15 86.3 138 42.0
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 2.5e-15 86.3 138 42.0
Actinidia14668 Actinidia chinensis HOM05D003951 ORTHO05D005378 3.3e-15 85.9 137 38.7
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 3.3e-15 85.9 136 39.0
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 3.3e-15 85.9 137 38.7
unitig_22.g5110 Utricularia gibba HOM05D003951 ORTHO05D020105 3.3e-15 85.9 138 38.4
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.3e-15 85.5 138 40.6
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.3e-15 85.5 138 37.7
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.3e-15 85.5 138 40.6
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 4.3e-15 85.5 138 40.6
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 4.3e-15 85.5 136 39.0
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 4.3e-15 85.5 136 40.4
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 5.6e-15 85.1 137 37.2
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 5.6e-15 85.1 140 37.9
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 7.3e-15 84.7 139 39.6
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 7.3e-15 84.7 137 38.7
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 7.3e-15 84.7 137 38.7
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 9.5e-15 84.3 141 39.7
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 9.5e-15 84.3 137 39.4
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 9.5e-15 84.3 137 38.7
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 1.6e-14 83.6 141 39.0
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 1.6e-14 83.6 141 39.0
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 2.1e-14 83.2 140 37.9
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 2.1e-14 83.2 138 37.7
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.8e-14 82.8 139 42.4
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 2.8e-14 82.8 140 37.9
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 3.6e-14 82.4 138 37.7
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 4.7e-14 82.0 138 37.0
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 4.7e-14 82.0 137 38.0
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 4.7e-14 82.0 136 38.2
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 4.7e-14 82.0 137 35.8
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 6.1e-14 81.6 137 38.0
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 1.4e-13 80.5 137 36.5
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 1.8e-13 80.1 140 35.7
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 5.2e-13 78.6 140 35.0
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 5.2e-13 78.6 134 37.3
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 5.2e-13 78.6 137 37.2
Actinidia15735 Actinidia chinensis HOM05D003951 ORTHO05D005378 8.9e-13 77.8 137 35.8
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 8.9e-13 77.8 143 34.3
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 2.0e-12 76.6 139 36.0
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 2.0e-12 76.6 139 36.0
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 2.6e-12 76.3 136 35.3
CDE02G1137 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 4.4e-12 75.5 143 33.6
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 6.4e-11 71.6 126 36.5
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 1.4e-10 70.5 127 37.0
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 1.6e-09 67.0 126 34.9
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 5.9e-09 65.1 124 31.5
Actinidia13321 Actinidia chinensis HOM05D003951 ORTHO05D005378 5.0e-08 62.0 37 73.0
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 8.6e-08 61.2 124 32.3
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 1.5e-07 60.5 55 54.5


User provided reference genes

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