Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18295 Sapria himalayana HOM05D002876 ORTHO05D007253 1.7e-78 295.8 141 100.0
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 7.6e-42 174.1 142 57.7
SHI53893 Sapria himalayana HOM05D002876 ORTHO05D007253 3.4e-26 122.1 118 56.8
SHI46460 Sapria himalayana HOM05D002876 ORTHO05D007253 4.5e-26 121.7 106 61.3
SHI44744 Sapria himalayana HOM05D002876 ORTHO05D007253 7.7e-26 120.9 106 60.4
SHI25245 Sapria himalayana HOM05D002876 ORTHO05D007253 1.7e-25 119.8 123 55.3
SHI50010 Sapria himalayana HOM05D002876 ORTHO05D007253 4.2e-24 115.2 108 56.5
SHI44696 Sapria himalayana HOM05D002876 ORTHO05D007253 7.2e-24 114.4 101 59.4
SHI48812 Sapria himalayana HOM05D002876 ORTHO05D007253 7.2e-24 114.4 102 58.8
SHI05004 Sapria himalayana HOM05D002876 ORTHO05D007253 3.6e-23 112.1 104 60.6
SHI48447 Sapria himalayana HOM05D002876 ORTHO05D007253 2.3e-22 109.4 104 57.7
SHI52098 Sapria himalayana HOM05D002876 ORTHO05D007253 7.4e-21 104.4 90 61.1
SHI34876 Sapria himalayana HOM05D002876 ORTHO05D007253 2.2e-20 102.8 90 60.0
SHI12000 Sapria himalayana HOM05D002876 ORTHO05D007253 3.7e-20 102.1 90 62.2
SHI17934 Sapria himalayana HOM05D002876 ORTHO05D000013 4.8e-20 101.7 90 57.8
SHI07655 Sapria himalayana HOM05D002876 ORTHO05D007253 6.3e-20 101.3 96 53.1
SHI22015 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-19 100.5 83 66.3
SHI10957 Sapria himalayana HOM05D002876 ORTHO05D007253 5.3e-19 98.2 104 55.8
SHI15269 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-16 90.5 71 66.2
SHI14512 Sapria himalayana HOM05D002876 ORTHO05D007253 5.5e-16 88.2 79 59.5
SHI37571 Sapria himalayana HOM05D002876 ORTHO05D007253 5.5e-16 88.2 79 59.5
ECA234G4280 Erigeron canadensis HOM05D000774 ORTHO05D000602 7.2e-16 87.8 129 36.4
SHI49995 Sapria himalayana HOM05D002876 ORTHO05D007253 1.2e-15 87.0 94 48.9
SHI50194 Sapria himalayana HOM05D002876 ORTHO05D007253 2.1e-15 86.3 60 68.3
HanXRQChr15g0493111 Helianthus annuus HOM05D002876 ORTHO05D007253 3.6e-15 85.5 95 43.2
SHI35341 Sapria himalayana HOM05D002876 ORTHO05D007253 4.7e-15 85.1 91 52.7
Dinv00066 Davidia involucrata HOM05D008341 ORTHO05D007253 7.9e-15 84.3 140 34.3
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 3.9e-14 82.0 138 35.5
SHI29980 Sapria himalayana HOM05D002876 ORTHO05D007253 3.9e-14 82.0 75 60.0
SHI54476 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-13 80.5 79 58.2
EL10Ac3g06478 Beta vulgaris HOM05D000017 ORTHO05D007253 1.5e-13 80.1 141 36.2
Dinv26922 Davidia involucrata HOM05D000017 ORTHO05D009679 2.6e-13 79.3 138 34.8
SHI15237 Sapria himalayana HOM05D002876 ORTHO05D007253 3.3e-13 79.0 116 43.1
EL10Ac6g14585 Beta vulgaris HOM05D000017 ORTHO05D007253 1.3e-12 77.0 136 34.6
SHI51969 Sapria himalayana HOM05D002876 ORTHO05D007253 1.3e-12 77.0 73 58.9
Dinv03558 Davidia involucrata HOM05D007975 ORTHO05D010011 2.2e-12 76.3 134 35.1
AUR62032729 Chenopodium quinoa HOM05D000861 ORTHO05D007385 3.7e-12 75.5 129 35.7
SHI32128 Sapria himalayana HOM05D002876 ORTHO05D007253 3.7e-12 75.5 66 63.6
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-12 74.7 150 31.3
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-12 74.7 150 31.3
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.3e-12 74.7 150 31.3
SHI49433 Sapria himalayana HOM05D002876 ORTHO05D007253 8.2e-12 74.3 71 56.3
CSS0024078 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-11 73.9 150 31.3
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-11 73.9 150 31.3
SHI21548 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-11 73.9 75 52.0
SHI32840 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-11 73.9 73 54.8
SHI49012 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-11 73.9 72 58.3
Ah.13g072940 Amaranthus hybridus HOM05D000017 ORTHO05D007253 1.4e-11 73.6 103 40.8
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.4e-11 73.6 150 30.7
SHI32833 Sapria himalayana HOM05D002876 ORTHO05D007253 1.4e-11 73.6 89 49.4
SHI47472 Sapria himalayana HOM05D002876 ORTHO05D007253 1.4e-11 73.6 46 69.6
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.8e-11 73.2 150 30.7
SHI02216 Sapria himalayana HOM05D002876 ORTHO05D000013 1.8e-11 73.2 62 58.1
SHI21979 Sapria himalayana HOM05D002876 ORTHO05D007253 2.4e-11 72.8 69 60.9
SHI37231 Sapria himalayana HOM05D002876 ORTHO05D007253 2.4e-11 72.8 74 55.4
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 4.1e-11 72.0 145 31.0
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 4.1e-11 72.0 145 31.0
SHI14631 Sapria himalayana HOM05D002876 ORTHO05D007253 4.1e-11 72.0 59 62.7
SHI53993 Sapria himalayana HOM05D002876 ORTHO05D007253 4.1e-11 72.0 71 57.7
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 5.3e-11 71.6 145 31.0
SHI16126 Sapria himalayana HOM05D002876 ORTHO05D007253 5.3e-11 71.6 45 71.1
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.0e-11 71.2 150 30.7
SHI00186 Sapria himalayana HOM05D002876 ORTHO05D007253 7.0e-11 71.2 132 38.6
SHI09107 Sapria himalayana HOM05D002876 ORTHO05D000013 7.0e-11 71.2 46 73.9
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 9.1e-11 70.9 124 30.6
TWI18G0813 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-10 70.1 118 35.6
SHI27674 Sapria himalayana HOM05D002876 ORTHO05D000106 2.0e-10 69.7 64 62.5
SHI29223 Sapria himalayana HOM05D002876 ORTHO05D007253 2.0e-10 69.7 100 44.0
Dinv09296 Davidia involucrata HOM05D001162 ORTHO05D001218 2.6e-10 69.3 140 30.7
SHI15050 Sapria himalayana HOM05D002876 ORTHO05D007253 2.6e-10 69.3 83 49.4
SHI52610 Sapria himalayana HOM05D002876 ORTHO05D007253 2.6e-10 69.3 45 68.9
SHI14647 Sapria himalayana HOM05D002876 ORTHO05D007253 3.5e-10 68.9 95 46.3
ECA248G3165 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.5e-10 68.6 52 55.8
CSS0007859 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.9e-10 68.2 125 33.6
CSS0015681 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.9e-10 68.2 150 28.7
SHI32527 Sapria himalayana HOM05D002876 ORTHO05D007253 5.9e-10 68.2 63 54.0
CSS0006340 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-10 67.8 125 33.6
SHI35377 Sapria himalayana HOM05D002876 ORTHO05D007253 7.7e-10 67.8 106 39.6
Sopen03g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-10 67.8 141 31.9
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 7.7e-10 67.8 107 33.6
CSS0048468 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-09 67.4 160 27.5
Dinv10054 Davidia involucrata HOM05D000017 ORTHO05D000013 1.3e-09 67.0 142 31.0
CSS0026252 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.2e-09 66.2 125 31.2
SHI18943 Sapria himalayana HOM05D002876 ORTHO05D007253 2.2e-09 66.2 52 63.5
SHI48605 Sapria himalayana HOM05D002876 ORTHO05D007253 2.2e-09 66.2 63 57.1
HPP92_015904 Vanilla planifolia HOM05D000017 ORTHO05D000013 2.2e-09 66.2 131 29.8
Sopen06g017080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-09 65.9 144 32.6
Sopen07g014380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-09 65.9 144 32.6
Sopen08g006100 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-09 65.9 144 32.6
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-09 65.5 102 38.2
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-09 65.5 102 38.2
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-09 65.5 102 38.2
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 3.8e-09 65.5 102 38.2
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-09 65.5 102 38.2
SHI48570 Sapria himalayana HOM05D002876 ORTHO05D007253 5.0e-09 65.1 42 69.0
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 5.0e-09 65.1 118 33.1
TWI09G0645 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.0e-09 65.1 126 32.5
CSS0031758 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.5e-09 64.7 150 27.3
SHI53478 Sapria himalayana HOM05D002876 ORTHO05D007253 6.5e-09 64.7 67 56.7
MSTRG.13409 Avicennia marina HOM05D000017 ORTHO05D000013 1.5e-08 63.5 93 39.8
CSS0000290 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-08 63.5 160 26.9
CSS0017905 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 63.5 125 32.0
CAN.G1094.1 Capsicum annuum HOM05D000017 ORTHO05D000013 1.5e-08 63.5 137 31.4
SHI26760 Sapria himalayana HOM05D000105 ORTHO05D000013 1.5e-08 63.5 45 68.9
Sopen02g035490 Solanum pennellii HOM05D005268 ORTHO05D007253 1.5e-08 63.5 143 29.4
Sopen07g005140 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-08 63.5 143 29.4
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.9e-08 63.2 141 31.2
Sopen11g024180 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-08 63.2 141 31.2
CSS0035420 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.5e-08 62.8 130 32.3
AL7G47070 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 3.2e-08 62.4 143 29.4
QL03p010991 Quercus lobata HOM05D000017 ORTHO05D000013 3.2e-08 62.4 124 32.3
Sopen05g014780 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-08 62.0 141 29.8
TWI60G1210 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.2e-08 62.0 91 39.6
Cc00_g09190 Coffea canephora HOM05D000037 ORTHO05D007253 5.5e-08 61.6 124 32.3
SHI53126 Sapria himalayana HOM05D002876 ORTHO05D000013 5.5e-08 61.6 44 68.2
Sopen08g022130 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-08 61.6 68 45.6
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.2e-08 61.2 70 42.9
Dinv18659 Davidia involucrata HOM05D000017 ORTHO05D000013 7.2e-08 61.2 142 27.5
Sopen05g027130 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-08 61.2 141 29.8
Ah.02g115090 Amaranthus hybridus HOM05D000017 ORTHO05D000013 1.2e-07 60.5 149 28.2
Ca_18962_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.2e-07 60.5 57 50.9
TWI38G0856 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-07 60.5 107 34.6
CSS0045149 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-07 60.1 63 44.4
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 1.6e-07 60.1 145 33.8
MBI14_g41772_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.6e-07 60.1 100 34.0
QL04p066041 Quercus lobata HOM05D000017 ORTHO05D000013 2.1e-07 59.7 124 33.1
CSS0003513 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CSS0010991 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CSS0031504 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CSS0034764 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CSS0044371 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CSS0050215 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 63 44.4
CANSAT56G3851 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-07 59.3 85 40.0
CAN.G1587.5 Capsicum annuum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 130 27.7
CAN.G1649.2 Capsicum annuum HOM05D005268 ORTHO05D011324 2.7e-07 59.3 81 37.0
Dinv01505 Davidia involucrata HOM05D007975 ORTHO05D010011 2.7e-07 59.3 44 59.1
ECA234G3455 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.7e-07 59.3 110 30.0
SHI09560 Sapria himalayana HOM05D002876 ORTHO05D007253 2.7e-07 59.3 60 53.3
CSS0001678 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.6e-07 58.9 63 44.4
CSS0024407 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.6e-07 58.9 63 44.4
CANSAT01G0384 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-07 58.9 84 40.5
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.6e-07 58.9 138 28.3
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.7e-07 58.5 57 50.9
SHI01670 Sapria himalayana HOM05D002876 ORTHO05D007253 4.7e-07 58.5 103 39.8
SHI24299 Sapria himalayana HOM05D002876 ORTHO05D000013 4.7e-07 58.5 69 46.4
Sopen01g034980 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-07 58.5 52 50.0
Sopen03g022260 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-07 58.5 52 50.0
Sopen04g029950 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-07 58.5 52 50.0
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 4.7e-07 58.5 132 29.5
TWI31G0287 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-07 58.5 38 68.4
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 6.1e-07 58.2 141 29.1
Ca_06557_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 6.1e-07 58.2 57 50.9
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 6.1e-07 58.2 143 33.6
CANSAT01G2447 Cannabis sativa HOM05D000017 ORTHO05D000013 8.0e-07 57.8 85 38.8
Ca_16174_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 8.0e-07 57.8 48 54.2
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 8.0e-07 57.8 52 50.0
SHI20458 Sapria himalayana HOM05D002876 ORTHO05D367328 8.0e-07 57.8 36 66.7
Sopen07g006090 Solanum pennellii HOM05D000017 ORTHO05D012656 8.0e-07 57.8 75 42.7
Sopen11g024330 Solanum pennellii HOM05D011435 ORTHO05D012656 8.0e-07 57.8 75 42.7
CSS0003535 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-06 57.4 63 42.9
Ca_22995_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 1.0e-06 57.4 53 49.1
arahy.Tifrunner.gnm1.ann1.ZR77QB Arachis hypogaea HOM05D000017 ORTHO05D007253 1.4e-06 57.0 70 44.3
CANSAT21G0893 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 57.0 63 46.0
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.8e-06 56.6 48 54.2
MBI02_g19392_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.8e-06 56.6 100 34.0
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.8e-06 56.6 111 32.4
TWI34G0976 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.8e-06 56.6 136 27.2
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-06 56.2 65 41.5
CAN.G864.10 Capsicum annuum HOM05D000017 ORTHO05D007253 2.3e-06 56.2 54 42.6
Ca_23084_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.3e-06 56.2 68 42.6
MBI02_g40783_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.3e-06 56.2 100 32.0
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 2.3e-06 56.2 118 30.5
Ca_02147_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 3.0e-06 55.8 53 47.2
Ca_02580_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 3.0e-06 55.8 51 51.0
Cc02_g31080 Coffea canephora HOM05D000017 ORTHO05D000013 3.0e-06 55.8 76 42.1
MBI16_g15550_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.0e-06 55.8 100 33.0
Ca_12796_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.0e-06 55.5 57 47.4
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 5.2e-06 55.1 139 23.7
CAN.G459.42 Capsicum annuum HOM05D005268 ORTHO05D011324 5.2e-06 55.1 53 45.3
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.2e-06 55.1 138 27.5
CANSAT25G0281 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-06 54.7 65 41.5
SHI25288 Sapria himalayana HOM05D002876 ORTHO05D007253 6.7e-06 54.7 37 70.3
CANSAT11G0649 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-06 54.3 64 42.2
SHI34866 Sapria himalayana HOM05D002876 ORTHO05D007253 8.8e-06 54.3 51 58.8
TWI75G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-06 54.3 138 26.8


User provided reference genes

Program Settings