Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18293 Sapria himalayana HOM05D000691 ORTHO05D000378 5.6e-47 190.7 101 100.0
SHI03493 Sapria himalayana HOM05D000691 ORTHO05D000378 1.1e-21 106.7 99 65.7
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 7.4e-15 84.0 96 53.1
SHI46291 Sapria himalayana HOM05D000004 ORTHO05D000378 2.4e-13 79.0 101 54.5
SHI46353 Sapria himalayana HOM05D000004 ORTHO05D000378 2.4e-13 79.0 101 54.5
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-13 77.4 92 53.3
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-13 77.4 92 53.3
Manes.13G002614 Manihot esculenta HOM05D000691 ORTHO05D000378 7.0e-13 77.4 107 49.5
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-13 77.0 112 43.8
Lj1C763G4 Lonicera japonica HOM05D000691 ORTHO05D000378 1.6e-12 76.3 105 46.7
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 2.6e-12 75.5 111 49.5
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-12 75.5 91 49.5
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-12 75.5 91 49.5
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-12 75.5 91 49.5
Lj1C1113T3 Lonicera japonica HOM05D000691 ORTHO05D000378 4.5e-12 74.7 94 50.0
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 5.9e-12 74.3 91 49.5
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 7.7e-12 73.9 112 43.8
Sopen08g017070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-11 73.2 110 43.6
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 2.2e-11 72.4 127 44.9
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-11 72.4 91 47.3
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-11 72.4 112 42.9
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-11 72.0 83 49.4
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-11 71.2 104 43.3
Sopen05g015410 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-11 70.9 112 42.0
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-11 70.9 104 43.3
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-11 70.5 81 49.4
Lj5P786T11 Lonicera japonica HOM05D000691 ORTHO05D000378 1.9e-10 69.3 101 43.6
Sopen01g013630 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-10 69.3 112 41.1
EL10Ac9g20847 Beta vulgaris HOM05D000691 ORTHO05D000378 2.5e-10 68.9 98 43.9
EL10Ac7g16543 Beta vulgaris HOM05D000691 ORTHO05D000378 3.2e-10 68.6 98 43.9
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 3.2e-10 68.6 90 50.0
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-10 68.6 93 45.2
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-10 68.2 92 45.7
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-10 67.8 96 43.8
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 7.2e-10 67.4 98 43.9
Sopen01g009790 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-10 67.4 107 40.2
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-10 67.4 92 45.7
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-10 67.0 92 44.6
AUR62042281 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.2e-09 66.6 84 48.8
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 1.2e-09 66.6 127 41.7
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 1.2e-09 66.6 127 41.7
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 1.2e-09 66.6 127 41.7
Sopen01g011520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-09 66.6 102 41.2
Sopen06g005960 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-09 66.6 112 40.2
Sopen05g023350 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-09 65.9 112 40.2
Sopen10g016400 Solanum pennellii HOM05D000004 ORTHO05D000378 2.1e-09 65.9 104 44.2
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-09 65.5 113 41.6
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 2.7e-09 65.5 127 40.9
Sopen01g024900 Solanum pennellii HOM05D000691 ORTHO05D000378 3.6e-09 65.1 81 44.4
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-09 65.1 92 43.5
SEGI_28832 Sequoiadendron giganteum HOM05D000691 ORTHO05D000378 4.7e-09 64.7 110 42.7
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-09 64.7 92 43.5
Sopen02g008960 Solanum pennellii HOM05D000691 ORTHO05D000378 6.1e-09 64.3 76 46.1
SHI15120 Sapria himalayana HOM05D000691 ORTHO05D000378 8.0e-09 63.9 42 81.0
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 8.0e-09 63.9 76 46.1
Sopen02g003780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 63.5 112 38.4
Duzib138G1071 Durio zibethinus HOM05D000004 ORTHO05D000378 3.0e-08 62.0 73 47.9
Sopen07g016640 Solanum pennellii HOM05D000004 ORTHO05D000378 3.0e-08 62.0 112 38.4
Sopen11g013420 Solanum pennellii HOM05D000691 ORTHO05D000378 5.2e-08 61.2 96 41.7
Sopen01g010780 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-08 60.8 77 42.9
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-08 60.8 96 39.6
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 6.7e-08 60.8 103 39.8
Sopen11g013830 Solanum pennellii HOM05D000004 ORTHO05D000378 6.7e-08 60.8 94 41.5
Sopen08g015530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 60.1 106 37.7
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 1.5e-07 59.7 105 38.1
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 105 40.0
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 90 43.3
Sopen12g027950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 110 37.3
SEGI_40087 Sequoiadendron giganteum HOM05D000691 ORTHO05D000378 2.0e-07 59.3 106 39.6
Oeu028951.1 Olea europaea HOM05D000691 ORTHO05D000378 2.6e-07 58.9 72 45.8
Oeu037340.1 Olea europaea HOM05D000691 ORTHO05D000378 2.6e-07 58.9 73 46.6
Oeu003087.1 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-07 58.5 97 41.2
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-07 58.5 73 45.2
Oeu048297.1 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-07 58.5 97 41.2
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 58.5 94 39.4
AUR62013492 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.4e-07 58.2 94 41.5
Oeu027505.1 Olea europaea HOM05D000691 ORTHO05D000378 4.4e-07 58.2 97 40.2
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 5.7e-07 57.8 111 37.8
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 5.7e-07 57.8 111 37.8
FvH4_6g15222 Fragaria vesca HOM05D000691 ORTHO05D000378 5.7e-07 57.8 111 37.8
FvH4_6g15223 Fragaria vesca HOM05D000691 ORTHO05D000378 5.7e-07 57.8 111 37.8
FvH4_6g17710 Fragaria vesca HOM05D014995 ORTHO05D000378 5.7e-07 57.8 110 40.0
FvH4_4g03471 Fragaria vesca HOM05D000691 ORTHO05D000378 7.5e-07 57.4 66 50.0
Lj5P491T3 Lonicera japonica HOM05D000691 ORTHO05D000378 7.5e-07 57.4 46 65.2
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 7.5e-07 57.4 111 39.6
SHI07582 Sapria himalayana HOM05D000691 ORTHO05D000378 7.5e-07 57.4 108 38.0
EL10Ac2g03487 Beta vulgaris HOM05D000691 ORTHO05D000378 9.7e-07 57.0 81 46.9
Oeu003392.1 Olea europaea HOM05D000691 ORTHO05D000378 9.7e-07 57.0 97 41.2
Oeu034465.1 Olea europaea HOM05D000691 ORTHO05D000378 9.7e-07 57.0 97 40.2
RcHm_v2.0_Chr2g0137481 Rosa chinensis HOM05D000691 ORTHO05D000378 9.7e-07 57.0 111 38.7
Sopen01g010660 Solanum pennellii HOM05D000002 ORTHO05D000378 9.7e-07 57.0 112 37.5
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 1.3e-06 56.6 97 39.2
AUR62042237 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.7e-06 56.2 73 46.6
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 1.7e-06 56.2 109 38.5
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 3.7e-06 55.1 115 39.1
Oeu050628.1 Olea europaea HOM05D000691 ORTHO05D000378 3.7e-06 55.1 97 40.2
Oeu052065.1 Olea europaea HOM05D000691 ORTHO05D000378 3.7e-06 55.1 113 36.3
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.8e-06 54.7 113 36.3
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.3e-06 54.3 109 40.4
HanXRQChr13g0409991 Helianthus annuus HOM05D000691 ORTHO05D000378 6.3e-06 54.3 71 42.3
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 54.3 111 35.1
HanXRQChr05g0133501 Helianthus annuus HOM05D000691 ORTHO05D000378 8.2e-06 53.9 82 40.2


User provided reference genes

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