Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18223 Sapria himalayana HOM05D001540 ORTHO05D367600 2.7e-135 485.3 243 100.0
Potri.013G028200 Populus trichocarpa HOM05D001540 ORTHO05D001520 2.4e-19 100.1 166 38.0
CiPaw.07G012900 Carya illinoinensis HOM05D001540 ORTHO05D001520 1.7e-17 94.0 181 38.7
Sabra13G0028700 Salix brachista HOM05D001540 ORTHO05D001520 5.0e-17 92.4 167 37.1
Potri.005G040300 Populus trichocarpa HOM05D001540 ORTHO05D001520 6.6e-17 92.0 170 38.8
Sabra05G0039300 Salix brachista HOM05D001540 ORTHO05D001520 1.1e-16 91.3 219 34.2
FAN02G2273 Fragaria x ananassa HOM05D001540 ORTHO05D001520 2.3e-14 83.6 222 32.4
Cfa006525 Carpinus fangiana HOM05D001540 ORTHO05D001520 3.1e-14 83.2 196 34.2
FAN05G2935 Fragaria x ananassa HOM05D001540 ORTHO05D001520 3.1e-14 83.2 224 31.2
FAN05G1651 Fragaria x ananassa HOM05D001540 ORTHO05D001520 4.0e-14 82.8 222 31.5
FvH4_6g04980 Fragaria vesca HOM05D001540 ORTHO05D001520 1.2e-13 81.3 171 35.1
FAN14G0612 Fragaria x ananassa HOM05D001540 ORTHO05D001520 1.2e-13 81.3 171 35.1
RcHm_v2.0_Chr3g0453491 Rosa chinensis HOM05D001540 ORTHO05D001520 2.0e-13 80.5 110 41.8
Haze_04260 Corylus avellana HOM05D001540 ORTHO05D001520 2.6e-13 80.1 207 33.8
FAN09G1386 Fragaria x ananassa HOM05D001540 ORTHO05D001520 4.4e-13 79.3 222 32.0
QL03p003637 Quercus lobata HOM05D001540 ORTHO05D001520 5.8e-13 79.0 213 34.3
Cpa.g.sc84.121 Carica papaya HOM05D001540 ORTHO05D001520 9.8e-13 78.2 184 34.2
COL.COLO4_13556 Corchorus olitorius HOM05D001540 ORTHO05D001520 1.4e-11 74.3 170 34.1
Manes.08G124500 Manihot esculenta HOM05D001540 ORTHO05D001520 2.4e-11 73.6 156 37.8
TWI12G1213 Tripterygium wilfordii HOM05D001540 ORTHO05D001520 2.4e-11 73.6 162 34.6
MD12G1226700 Malus domestica HOM05D001540 ORTHO05D001520 5.4e-11 72.4 146 35.6
Thecc.05G298200 Theobroma cacao HOM05D001540 ORTHO05D001520 1.2e-10 71.2 162 34.0
TWI36G1034 Tripterygium wilfordii HOM05D001540 ORTHO05D001520 1.2e-10 71.2 217 31.3
Gohir.D13G178500 Gossypium hirsutum HOM05D001540 ORTHO05D001520 2.0e-10 70.5 166 31.9
Gorai.013G203700 Gossypium raimondii HOM05D001540 ORTHO05D001520 2.7e-10 70.1 166 31.9
MD04G1212000 Malus domestica HOM05D001540 ORTHO05D001520 4.6e-10 69.3 146 34.9
Gohir.A13G172700 Gossypium hirsutum HOM05D001540 ORTHO05D001520 6.0e-10 68.9 167 33.5
CiPaw.08G167900 Carya illinoinensis HOM05D001540 ORTHO05D001520 7.8e-10 68.6 165 33.9
Peaxi162Scf00434g00727 Petunia axillaris HOM05D001540 ORTHO05D001520 7.8e-10 68.6 113 37.2
CANSAT54G2580 Cannabis sativa HOM05D001540 ORTHO05D001520 1.0e-09 68.2 164 34.1
Duzib177G0168 Durio zibethinus HOM05D001540 ORTHO05D001520 1.0e-09 68.2 165 32.7
Gohir.D11G271300 Gossypium hirsutum HOM05D001540 ORTHO05D001520 1.7e-09 67.4 158 32.9
Gohir.A11G261000 Gossypium hirsutum HOM05D001540 ORTHO05D001520 3.9e-09 66.2 160 33.8
CSS0039456 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 1.9e-08 63.9 59 54.2
Gorai.007G291800 Gossypium raimondii HOM05D001540 ORTHO05D001520 2.5e-08 63.5 158 32.3
Actinidia30897 Actinidia chinensis HOM05D001540 ORTHO05D001520 4.3e-08 62.8 164 33.5
vmacro05043 Vaccinium macrocarpon HOM05D001540 ORTHO05D001520 4.3e-08 62.8 60 46.7
Medtr1g082300 Medicago truncatula HOM05D001540 ORTHO05D001520 5.6e-08 62.4 188 34.0
Eucgr.B02027 Eucalyptus grandis HOM05D001540 ORTHO05D001520 7.3e-08 62.0 110 33.6
Actinidia05734 Actinidia chinensis HOM05D001540 ORTHO05D001520 9.5e-08 61.6 59 54.2
TAR362G0210 Trochodendron aralioides HOM05D001540 ORTHO05D001520 1.6e-07 60.8 119 33.6
TAR365G1201 Trochodendron aralioides HOM05D001540 ORTHO05D001520 1.6e-07 60.8 113 33.6
Ca_10081_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 4.7e-07 59.3 117 35.0
VMungo0720G2593 Vigna mungo HOM05D001540 ORTHO05D001520 4.7e-07 59.3 122 34.4
Rhsim07G0178500 Rhododendron simsii HOM05D001540 ORTHO05D001520 8.0e-07 58.5 124 33.9
Cc02_g32430 Coffea canephora HOM05D001540 ORTHO05D001520 1.4e-06 57.8 58 44.8
Lj5g0002193 Lotus japonicus HOM05D001540 ORTHO05D001520 1.4e-06 57.8 59 50.8
AUR62000848 Chenopodium quinoa HOM05D001540 ORTHO05D001520 1.8e-06 57.4 125 35.2
Phvul.007G183100 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 1.8e-06 57.4 125 36.0
PGR083G0549 Punica granatum HOM05D001540 ORTHO05D001520 1.8e-06 57.4 57 50.9
TPR.G2713 Trifolium pratense HOM05D001540 ORTHO05D001520 1.8e-06 57.4 184 31.0
Zm00001eb349780 Zea mays HOM05D001540 ORTHO05D001520 1.8e-06 57.4 125 32.0
AUR62005127 Chenopodium quinoa HOM05D001540 ORTHO05D001520 2.3e-06 57.0 118 34.7
Os05g0405900 Oryza sativa ssp. japonica HOM05D001540 ORTHO05D001520 2.3e-06 57.0 59 50.8
Sc09g0003620 Simmondsia chinensis HOM05D001540 ORTHO05D001520 2.3e-06 57.0 159 31.4
ClCG03G016690 Citrullus lanatus HOM05D001540 ORTHO05D001520 3.1e-06 56.6 202 29.2
Ah.04g159870 Amaranthus hybridus HOM05D001540 ORTHO05D001520 5.2e-06 55.8 118 33.1
Glyma.10G157700 Glycine max HOM05D001540 ORTHO05D001520 5.2e-06 55.8 80 45.0
Glyma.20G230851 Glycine max HOM05D001540 ORTHO05D001520 5.2e-06 55.8 181 32.6
Nn3g21207 Nelumbo nucifera HOM05D001540 ORTHO05D001520 6.8e-06 55.5 59 52.5
MBI19_g13520_MAGBIO Magnolia biondii HOM05D001540 ORTHO05D001520 8.9e-06 55.1 122 36.9
Solyc01g098430.3 Solanum lycopersicum HOM05D001540 ORTHO05D001520 8.9e-06 55.1 122 32.0


User provided reference genes

Program Settings