Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 1.2e-126 456.4 226 100.0
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.7e-72 276.6 179 74.9
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.6e-70 270.0 178 72.5
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 6.2e-70 268.1 179 71.5
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.3e-69 265.0 178 70.8
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 6.9e-69 264.6 178 71.9
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.0e-68 263.1 178 70.8
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.8e-68 261.5 173 72.3
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 7.6e-68 261.2 175 72.6
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 9.9e-68 260.8 173 72.8
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 9.9e-68 260.8 174 71.8
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 1.3e-67 260.4 173 72.8
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.7e-67 260.0 193 65.8
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.7e-67 260.0 193 65.8
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 1.7e-67 260.0 180 70.0
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 4.9e-67 258.5 198 64.1
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 8.4e-67 257.7 179 67.0
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 1.9e-66 256.5 163 74.8
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 1.9e-66 256.5 183 67.8
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 2.4e-66 256.1 173 72.3
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 4.2e-66 255.4 178 69.7
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 5.5e-66 255.0 179 69.8
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 7.1e-66 254.6 194 63.4
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 7.1e-66 254.6 162 71.6
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 7.1e-66 254.6 173 70.5
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 9.3e-66 254.2 173 71.1
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 1.2e-65 253.8 183 67.8
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.6e-65 253.4 179 68.7
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 2.1e-65 253.1 178 69.7
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 3.5e-65 252.3 178 69.1
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 7.9e-65 251.1 183 66.7
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 7.9e-65 251.1 179 67.6
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 7.9e-65 251.1 178 70.8
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 7.9e-65 251.1 173 71.1
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 1.0e-64 250.8 178 69.1
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 1.0e-64 250.8 179 68.2
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 2.3e-64 249.6 175 68.6
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 2.3e-64 249.6 178 66.9
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 3.9e-64 248.8 183 65.0
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 3.9e-64 248.8 185 63.8
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 3.9e-64 248.8 178 66.3
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 6.7e-64 248.1 173 65.9
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 8.7e-64 247.7 170 67.6
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 8.7e-64 247.7 181 67.4
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.1e-63 247.3 179 67.6
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 2.5e-63 246.1 179 67.0
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 2.5e-63 246.1 173 68.8
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 3.3e-63 245.7 181 66.3
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 4.3e-63 245.4 173 69.9
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 5.6e-63 245.0 180 65.6
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 5.6e-63 245.0 180 65.6
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 1.6e-62 243.4 173 68.8
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.6e-62 243.4 179 65.9
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 2.1e-62 243.0 179 65.4
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 2.1e-62 243.0 179 64.8
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 2.8e-62 242.7 173 69.4
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.8e-62 242.7 171 66.7
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 3.7e-62 242.3 173 67.6
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 4.8e-62 241.9 173 68.2
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 6.2e-62 241.5 194 62.4
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 6.2e-62 241.5 176 69.3
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 6.2e-62 241.5 171 69.0
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 1.1e-61 240.7 173 69.4
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 1.4e-61 240.4 194 61.9
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 1.4e-61 240.4 179 63.7
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 1.8e-61 240.0 177 67.8
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 1.8e-61 240.0 179 63.7
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 9.0e-61 237.7 179 63.7
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 3.4e-60 235.7 174 64.9
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 4.5e-60 235.3 184 59.2
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 8.4e-59 231.1 173 66.5
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 8.4e-59 231.1 240 52.5
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 2.5e-58 229.6 203 57.6
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 1.6e-57 226.9 179 60.3
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 1.8e-56 223.4 185 63.2
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.5e-55 220.3 154 71.4
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.5e-55 219.5 221 51.6
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 2.0e-52 209.9 185 56.8
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 5.8e-52 208.4 147 70.1
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 1.3e-51 207.2 168 61.9
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 1.3e-51 207.2 148 68.9
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 2.2e-51 206.5 173 60.1
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 1.9e-50 203.4 153 66.0
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 4.6e-49 198.7 137 72.3
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.5e-47 193.0 161 62.7
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 1.8e-45 186.8 236 47.5
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 1.9e-42 176.8 144 63.9
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 2.5e-42 176.4 166 54.2
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 9.4e-42 174.5 133 63.2
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 1.6e-41 173.7 181 48.6
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 5.1e-40 168.7 272 38.6
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 1.1e-39 167.5 198 43.9
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 2.2e-38 163.3 180 42.2
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 4.5e-36 155.6 105 71.4
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 5.9e-36 155.2 180 41.7
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 6.5e-35 151.8 191 46.6
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 8.5e-35 151.4 100 70.0
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 1.4e-34 150.6 187 43.9
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 2.1e-33 146.7 149 51.7
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 6.7e-32 141.7 101 63.4
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 7.4e-31 138.3 101 62.4
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 1.7e-30 137.1 158 53.2
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 5.0e-27 125.6 144 52.1
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 1.0e-24 117.9 84 67.9
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 1.1e-23 114.4 68 70.6
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 2.0e-23 113.6 68 75.0
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 1.4e-21 107.5 71 71.8
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 1.6e-20 104.0 111 52.3
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 4.5e-20 102.4 180 31.7
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 1.3e-19 100.9 56 82.1
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 3.4e-15 86.3 106 47.2
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 5.5e-10 68.9 114 40.4
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 9.4e-10 68.2 156 32.1
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 4.7e-09 65.9 48 68.8
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 8.0e-09 65.1 49 57.1
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 3.4e-07 59.7 28 82.1
BcaC02g11915 Brassica carinata HOM05D004613 ORTHO05D014940 3.7e-06 56.2 44 54.5
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 6.3e-06 55.5 59 44.1
BolC2t08054H Brassica oleracea HOM05D004613 ORTHO05D014940 6.3e-06 55.5 28 75.0


User provided reference genes

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