Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18135 Sapria himalayana HOM05D000002 ORTHO05D000047 9.8e-56 219.9 114 100.0
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 6.4e-31 137.5 131 57.3
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 2.5e-27 125.6 132 50.0
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 1.2e-26 123.2 132 48.5
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 2.4e-25 119.0 132 47.0
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 2.0e-24 115.9 132 44.7
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 7.6e-24 114.0 132 43.9
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 7.6e-24 114.0 132 43.9
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 2.2e-23 112.5 132 43.2
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 2.2e-23 112.5 131 46.6
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 3.8e-23 111.7 132 43.2
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 1.1e-22 110.2 132 43.2
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 5.4e-22 107.8 132 43.9
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 6.0e-21 104.4 123 43.9
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.0e-20 103.6 127 44.9
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 1.3e-20 103.2 129 41.9
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.3e-20 103.2 127 44.9
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.3e-20 103.2 129 44.2
HPP92_025431 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.3e-20 102.4 110 50.0
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 3.0e-20 102.1 132 38.6
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 5.1e-20 101.3 127 44.1
Ca_04068_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 8.7e-20 100.5 122 43.4
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.1e-19 100.1 100 54.0
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-19 100.1 130 40.0
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.9e-19 99.4 131 38.2
Cpa.g.sc15.71 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-19 97.8 126 46.8
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 4.8e-18 94.7 128 39.1
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.1e-17 93.6 118 44.9
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-16 90.1 74 62.2
Cpa.g.sc148.30 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-16 88.2 119 44.5
SHI01377 Sapria himalayana HOM05D000002 ORTHO05D000047 7.6e-16 87.4 80 60.0
HPP92_005717 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.4e-14 82.4 107 42.1
arahy.Tifrunner.gnm1.ann1.CN0JQN Arachis hypogaea HOM05D000002 ORTHO05D000047 4.2e-14 81.6 129 34.9
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 1.2e-13 80.1 71 56.3
HPP92_022694 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.6e-13 79.7 103 45.6
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-13 78.6 82 53.7
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 3.5e-13 78.6 122 36.1
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 1.0e-12 77.0 99 42.4
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 1.8e-12 76.3 112 39.3
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 129 34.1
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 128 32.8
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-12 75.9 128 32.8
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-12 75.9 128 32.8
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-12 75.9 128 32.8
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-12 75.9 128 32.8
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-12 75.9 128 32.8
Phvul.008G096100 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 2.3e-12 75.9 112 37.5
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 2.3e-12 75.9 87 47.1
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 1.5e-11 73.2 130 32.3
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 3.6e-10 68.6 130 29.2
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-09 66.6 130 28.5
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 1.8e-09 66.2 130 30.8
SHI01676 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-09 66.2 99 43.4
ClCG10G009560 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.4e-09 65.9 128 30.5
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-09 65.5 128 31.2
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-09 65.5 113 34.5
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-09 65.5 113 34.5
Hma1.2p1_0147F.1_g065860 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-09 65.1 102 35.3
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-09 65.1 130 28.5
SHI03919 Sapria himalayana HOM05D000002 ORTHO05D000047 4.0e-09 65.1 116 37.1
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-09 64.7 129 30.2
Cpa.g.sc32.91 Carica papaya HOM05D000002 ORTHO05D000047 5.3e-09 64.7 112 36.6
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 129 30.2
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 129 30.2
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 129 30.2
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-09 64.3 128 31.2
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-09 63.9 130 29.2
ClCG02G008850 Citrullus lanatus HOM05D000002 ORTHO05D000047 1.2e-08 63.5 128 30.5
Cpa.g.sc20.211 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-08 63.2 46 63.0
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-08 63.2 128 30.5
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 1.5e-08 63.2 120 30.8
Cpa.g.sc12.9 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-08 62.4 66 47.0
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 3.4e-08 62.0 116 31.0
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 3.4e-08 62.0 119 29.4
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.5e-08 61.6 129 30.2
CSS0025512 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.5e-08 61.6 128 28.9
TPR.G10316 Trifolium pratense HOM05D000002 ORTHO05D000047 4.5e-08 61.6 132 28.0
VMungo0540G1667 Vigna mungo HOM05D002022 ORTHO05D002056 4.5e-08 61.6 86 40.7
ClCG09G007490 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 34.5
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 7.6e-08 60.8 128 25.0
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-08 60.8 132 28.0
Hma1.2p1_0661F.1_g198180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-08 60.8 128 29.7
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 9.9e-08 60.5 120 30.0
Ca_24124_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.3e-07 60.1 130 27.7
Hma1.2p1_0939F.1_g239310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-07 60.1 128 29.7
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 1.3e-07 60.1 130 29.2
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 59.7 128 28.9
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 59.7 128 28.9
Hma1.2p1_0668F.1_g199815 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 59.7 128 28.9
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 59.7 128 28.9
Hma1.2p1_0734F.1_g210330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 59.7 111 30.6
CSS0015246 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-07 59.3 45 57.8
Gorai.007G344200 Gossypium raimondii HOM05D000002 ORTHO05D000047 2.2e-07 59.3 104 31.7
SHI01260 Sapria himalayana HOM05D000002 ORTHO05D000047 2.2e-07 59.3 112 37.5
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-07 58.9 132 27.3
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 3.8e-07 58.5 119 30.3
Oeu008211.1 Olea europaea HOM05D000002 ORTHO05D000047 3.8e-07 58.5 46 58.7
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.9e-07 58.2 128 26.6
ClCG04G002150 Citrullus lanatus HOM05D000002 ORTHO05D000001 6.4e-07 57.8 128 30.5
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 6.4e-07 57.8 128 24.2
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 6.4e-07 57.8 128 24.2
TPR.G27608 Trifolium pratense HOM05D000002 ORTHO05D000047 8.4e-07 57.4 38 68.4
Cpa.g.sc110.37 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-06 57.0 46 58.7
Ciclev10013837m.g Citrus clementina HOM05D000002 ORTHO05D000047 1.1e-06 57.0 118 27.1
Sopen04g006340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.0 129 26.4
Sopen09g008000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.0 126 26.2
ClCG07G006100 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.4e-06 56.6 111 28.8
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 56.6 124 27.4
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 56.6 128 25.8
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 1.4e-06 56.6 127 28.3
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-06 56.2 130 26.2
Hma1.2p1_0946F.1_g240310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-06 56.2 129 28.7
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.4e-06 55.8 126 27.8
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 55.8 125 28.0
HPP92_009345 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.4e-06 55.8 68 41.2
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 2.4e-06 55.8 118 28.0
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.2e-06 55.1 128 29.7
PGR142G0044 Punica granatum HOM05D000002 ORTHO05D000047 4.2e-06 55.1 120 28.3
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.2e-06 55.1 128 23.4
CSS0023724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.5e-06 54.7 111 25.2
Sopen01g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 54.7 127 25.2
Sabra05G0005000 Salix brachista HOM05D000002 ORTHO05D000047 7.1e-06 54.3 126 27.8
Sabra16G0275300 Salix brachista HOM05D000002 ORTHO05D000047 7.1e-06 54.3 126 27.8
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.1e-06 54.3 109 28.4
Sopen07g025770 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.3 126 25.4
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 9.3e-06 53.9 127 29.9
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 9.3e-06 53.9 125 25.6
TPR.G30202 Trifolium pratense HOM05D000002 ORTHO05D000001 9.3e-06 53.9 45 51.1
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 9.3e-06 53.9 125 27.2
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 9.3e-06 53.9 52 44.2


User provided reference genes

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