Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18086 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-61 237.3 118 100.0
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-21 104.8 88 60.2
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-21 104.8 88 60.2
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-21 104.0 87 63.2
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-20 100.5 88 58.0
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-18 96.3 87 55.2
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-18 94.7 98 49.0
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-17 92.8 107 49.5
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-17 92.8 87 52.9
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-17 91.7 100 50.0
SHI21225 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-17 91.7 78 65.4
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.1e-17 90.9 87 51.7
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 9.3e-17 90.5 88 53.4
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-16 89.0 87 52.9
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-16 88.2 100 50.0
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-15 87.0 84 53.6
Atru.chr2.2332 Acer truncatum HOM05D000002 ORTHO05D000001 5.1e-15 84.7 82 54.9
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-14 83.6 83 49.4
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-14 83.6 83 49.4
THA.LOC109116072 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-14 83.6 85 49.4
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 5.6e-14 81.3 89 52.8
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.6e-14 81.3 101 43.6
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-13 79.3 101 42.6
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.8e-13 79.0 98 42.9
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.8e-13 79.0 82 48.8
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.7e-13 78.6 83 47.0
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.7e-13 78.6 83 48.2
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.8e-13 78.2 82 47.6
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-13 77.4 85 47.1
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-12 77.0 84 46.4
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.8e-12 76.3 83 45.8
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.0e-12 75.1 82 46.3
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-12 74.7 87 47.1
THA.LOC109116120 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-12 74.7 82 45.1
THA.LOC104798820 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.5e-11 73.2 83 45.8
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-11 72.8 97 41.2
THA.LOC109115967 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.6e-11 72.4 85 42.4
Thhalv10011941m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 3.4e-11 72.0 109 39.4
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-10 69.7 87 42.5
THA.LOC104825710 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.9e-10 68.9 85 36.5
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 4.9e-10 68.2 83 38.6
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-10 67.8 85 44.7
ECA240G1898 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-09 65.1 89 39.3
SHI32964 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-09 65.1 74 45.9
AUR62008990 Chenopodium quinoa HOM05D000720 ORTHO05D000549 2.7e-08 62.4 73 41.1
Sp1g37055 Schrenkiella parvula HOM05D000002 ORTHO05D000001 3.5e-08 62.0 87 39.1
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 1.0e-07 60.5 95 41.1
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 60.1 61 47.5
SHI21191 Sapria himalayana HOM05D033424 ORTHO05D000001 3.9e-07 58.5 60 55.0
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 58.5 87 34.5
EL10Ac4g09072 Beta vulgaris HOM05D000002 ORTHO05D000001 5.1e-07 58.2 79 39.2
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-07 58.2 87 34.5
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-07 58.2 87 34.5
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 6.7e-07 57.8 72 38.9
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.8 87 34.5
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 1.9e-06 56.2 83 34.9
ECA238G0397 Erigeron canadensis HOM05D000152 ORTHO05D000609 2.5e-06 55.8 70 41.4
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 7.4e-06 54.3 83 33.7
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 54.3 86 32.6
Nn1g00402 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.6e-06 53.9 47 51.1
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 9.6e-06 53.9 88 33.0


User provided reference genes

Program Settings