Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 7.7e-200 700.3 357 100.0
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 2.5e-17 94.0 56 85.7
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 7.4e-17 92.4 56 82.1
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 7.4e-17 92.4 56 82.1
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.6e-16 91.3 58 81.0
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.6e-16 91.3 56 80.4
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 2.2e-16 90.9 56 82.1
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.8e-16 90.5 56 80.4
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.7e-16 90.1 56 82.1
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 3.7e-16 90.1 56 82.1
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 3.7e-16 90.1 57 78.9
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 4.8e-16 89.7 56 82.1
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.8e-16 89.7 57 77.2
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.8e-16 89.7 57 77.2
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 4.8e-16 89.7 58 77.6
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 6.3e-16 89.4 58 77.6
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 6.3e-16 89.4 58 77.6
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 6.3e-16 89.4 58 79.3
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 8.2e-16 89.0 56 80.4
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 8.2e-16 89.0 58 75.9
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 8.2e-16 89.0 56 80.4
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 8.2e-16 89.0 56 78.6
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 8.2e-16 89.0 56 78.6
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.1e-15 88.6 56 78.6
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.1e-15 88.6 56 78.6
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.1e-15 88.6 56 80.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.1e-15 88.6 72 69.4
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.4e-15 88.2 56 78.6
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.4e-15 88.2 56 80.4
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.8e-15 87.8 60 76.7
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.4e-15 87.4 56 80.4
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 3.1e-15 87.0 56 76.8
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 3.1e-15 87.0 57 71.9
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 5.3e-15 86.3 56 78.6
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 5.3e-15 86.3 56 78.6
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 6.9e-15 85.9 56 76.8
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 9.0e-15 85.5 56 76.8
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 9.0e-15 85.5 56 76.8
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.0e-15 85.5 57 75.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 9.0e-15 85.5 123 43.9
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 9.0e-15 85.5 56 76.8
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.2e-14 85.1 57 73.7
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.5e-14 84.7 56 75.0
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.5e-14 84.7 56 76.8
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.5e-14 84.7 56 76.8
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.0e-14 84.3 56 75.0
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.0e-14 84.3 55 76.4
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 2.0e-14 84.3 56 73.2
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.6e-14 84.0 56 73.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.6e-14 84.0 123 43.1
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.4e-14 83.6 56 73.2
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 4.5e-14 83.2 56 75.0
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 5.9e-14 82.8 57 73.7
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.9e-14 82.8 51 84.3
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.9e-14 82.8 51 84.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 7.6e-14 82.4 56 75.0
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 7.6e-14 82.4 57 73.7
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.0e-13 82.0 57 73.7
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.3e-13 81.6 56 73.2
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.3e-13 81.6 60 68.3
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.3e-13 81.6 62 67.7
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.3e-13 81.6 56 73.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.7e-13 81.3 62 67.7
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.7e-13 81.3 62 67.7
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.7e-13 81.3 56 73.2
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.7e-13 81.3 57 71.9
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 2.2e-13 80.9 56 75.0
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.9e-13 80.5 57 71.9
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 3.8e-13 80.1 58 65.5
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 5.0e-13 79.7 69 65.2
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 8.5e-13 79.0 51 80.4
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 8.5e-13 79.0 57 66.7
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.1e-12 78.6 56 71.4
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.1e-12 78.6 54 74.1
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.1e-12 78.6 57 68.4
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.9e-12 77.8 56 69.6
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.9e-12 77.8 56 69.6
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.5e-12 77.4 70 61.4
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.5e-12 77.4 56 67.9
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 4.2e-12 76.6 64 60.9
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 4.2e-12 76.6 64 60.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 4.2e-12 76.6 58 63.8
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 5.5e-12 76.3 76 53.9
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.5e-12 76.3 58 65.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 9.3e-12 75.5 63 60.3
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 9.3e-12 75.5 63 61.9
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 1.2e-11 75.1 64 59.4
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.2e-11 75.1 63 60.3
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.2e-11 75.1 63 60.3
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-11 74.7 63 60.3
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 2.7e-11 73.9 125 40.8
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 6.1e-11 72.8 63 60.3
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 6.1e-11 72.8 63 60.3
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 6.1e-11 72.8 56 66.1
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 6.1e-11 72.8 52 73.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 7.9e-11 72.4 63 60.3
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 7.9e-11 72.4 56 64.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 7.9e-11 72.4 50 74.0
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 1.0e-10 72.0 56 58.9
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.0e-10 72.0 70 58.6
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.8e-10 71.2 55 65.5
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 3.0e-10 70.5 52 71.2
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 3.0e-10 70.5 52 71.2
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 2.5e-09 67.4 57 57.9
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 2.5e-09 67.4 57 63.2
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.5e-09 67.4 50 70.0
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 3.3e-09 67.0 56 60.7
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 4.3e-09 66.6 53 66.0
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 7.4e-09 65.9 54 57.4
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 2.8e-08 63.9 56 60.7
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 8.2e-08 62.4 53 54.7
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.5e-06 58.2 53 56.6


User provided reference genes

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