Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 1.6e-164 582.8 307 100.0
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 3.6e-20 103.2 311 30.5
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 5.2e-19 99.4 170 38.2
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 1.2e-18 98.2 310 29.7
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 2.0e-18 97.4 202 36.6
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 9.8e-18 95.1 127 44.9
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 3.7e-17 93.2 312 29.2
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 2.4e-16 90.5 139 43.2
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.4e-16 90.5 197 32.0
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.4e-16 90.5 197 32.0
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 5.4e-16 89.4 139 41.7
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 7.0e-16 89.0 125 43.2
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 9.2e-16 88.6 309 29.1
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.2e-15 88.2 310 27.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.2e-15 88.2 298 27.5
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 2.7e-15 87.0 160 36.2
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.3e-14 84.7 312 28.5
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 3.9e-14 83.2 307 28.3
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 6.6e-14 82.4 214 33.6
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 8.6e-14 82.0 96 47.9
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.5e-13 80.5 129 37.2
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.3e-13 80.1 96 47.9
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 3.3e-13 80.1 96 47.9
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 9.5e-13 78.6 319 27.0
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 9.5e-13 78.6 170 34.7
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 1.2e-12 78.2 126 36.5
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 1.6e-12 77.8 139 37.4
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.6e-12 77.8 291 29.9
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 3.6e-12 76.6 201 32.3
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 3.6e-12 76.6 111 38.7
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 3.6e-12 76.6 138 37.0
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 8.0e-12 75.5 259 30.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 8.0e-12 75.5 142 31.7
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.4e-11 74.7 139 35.3
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 3.1e-11 73.6 305 28.9
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 3.1e-11 73.6 98 39.8
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 4.0e-11 73.2 150 38.0
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 4.0e-11 73.2 326 26.1
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 5.2e-11 72.8 333 27.0
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 6.8e-11 72.4 201 27.4
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 6.8e-11 72.4 261 26.8
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 6.8e-11 72.4 147 37.4
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.5e-10 71.2 126 33.3
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-10 70.9 130 35.4
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-10 70.9 130 35.4
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 2.0e-10 70.9 169 32.0
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 2.6e-10 70.5 127 29.9
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 2.6e-10 70.5 193 30.6
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 3.4e-10 70.1 171 33.3
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 4.4e-10 69.7 145 36.6
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 4.4e-10 69.7 109 37.6
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 5.8e-10 69.3 139 33.1
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 7.5e-10 68.9 130 34.6
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 7.5e-10 68.9 147 35.4
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 9.8e-10 68.6 257 28.0
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 2.9e-09 67.0 213 28.2
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 8.3e-09 65.5 118 32.2
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 8.3e-09 65.5 125 38.4
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 1.9e-08 64.3 178 28.7
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.9e-08 64.3 140 37.9
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.9e-08 64.3 191 29.3
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.9e-08 64.3 101 34.7
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 7.0e-08 62.4 148 32.4
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 7.0e-08 62.4 108 38.0
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.2e-07 61.6 183 30.1
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 1.6e-07 61.2 103 39.8
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 3.5e-07 60.1 118 37.3
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 4.6e-07 59.7 83 37.3
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 4.6e-07 59.7 110 38.2
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 6.0e-07 59.3 303 24.8
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.0e-06 58.5 125 35.2
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 1.0e-06 58.5 125 35.2
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 1.0e-06 58.5 125 35.2
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 1.3e-06 58.2 125 35.2
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.3e-06 58.2 123 33.3
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 2.3e-06 57.4 204 27.9
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 3.0e-06 57.0 103 35.9
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 3.9e-06 56.6 129 32.6
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 3.9e-06 56.6 123 33.3
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 5.0e-06 56.2 204 27.9
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 6.6e-06 55.8 140 32.9


User provided reference genes

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