Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17596 Sapria himalayana HOM05D003065 ORTHO05D003802 1.1e-75 286.6 141 100.0
Cfa014437 Carpinus fangiana HOM05D003065 ORTHO05D003802 3.8e-09 65.5 38 81.6
Cpa.g.sc8.233 Carica papaya HOM05D003065 ORTHO05D003802 6.5e-09 64.7 54 61.1
Potri.007G121900 Populus trichocarpa HOM05D003065 ORTHO05D003802 1.5e-08 63.5 51 60.8
QL08p033752 Quercus lobata HOM05D003065 ORTHO05D003802 1.9e-08 63.2 39 71.8
TAR626G0646 Trochodendron aralioides HOM05D003065 ORTHO05D003802 3.2e-08 62.4 57 54.4
CiPaw.04G117500 Carya illinoinensis HOM05D003065 ORTHO05D003802 4.2e-08 62.0 57 52.6
Nitab4.5_0005894g0020 Nicotiana tabacum HOM05D003065 ORTHO05D003802 4.2e-08 62.0 52 55.8
Oeu003067.1 Olea europaea HOM05D003065 ORTHO05D003802 4.2e-08 62.0 53 56.6
GSVIVG01030621001 Vitis vinifera HOM05D003065 ORTHO05D003802 4.2e-08 62.0 50 62.0
PGSC0003DMG400024333 Solanum tuberosum HOM05D003065 ORTHO05D003802 5.5e-08 61.6 128 32.0
Nitab4.5_0001176g0140 Nicotiana tabacum HOM05D003065 ORTHO05D003802 9.4e-08 60.8 52 53.8
Potri.017G038500 Populus trichocarpa HOM05D003065 ORTHO05D003802 9.4e-08 60.8 51 58.8
Sabra07G0098600 Salix brachista HOM05D003065 ORTHO05D003802 9.4e-08 60.8 51 58.8
CSS0049428 Camellia sinensis var. sinensis HOM05D003065 ORTHO05D003802 1.2e-07 60.5 47 63.8
MELO3C019237.2 Cucumis melo HOM05D003065 ORTHO05D003802 1.2e-07 60.5 57 52.6
Solyc12g005780.3 Solanum lycopersicum HOM05D003065 ORTHO05D003802 1.2e-07 60.5 50 56.0
Sopen12g001710 Solanum pennellii HOM05D003065 ORTHO05D003802 1.2e-07 60.5 50 56.0
SalBow1G7597 Salvia bowleyana HOM05D003065 ORTHO05D003802 1.6e-07 60.1 37 75.7
HPP92_017620 Vanilla planifolia HOM05D003065 ORTHO05D003802 1.6e-07 60.1 40 62.5
Dinv02749 Davidia involucrata HOM05D003065 ORTHO05D003802 2.1e-07 59.7 37 73.0
Dinv18529 Davidia involucrata HOM05D003065 ORTHO05D003802 2.1e-07 59.7 37 73.0
Lalb_Chr01g0005571 Lupinus albus HOM05D003065 ORTHO05D003802 2.1e-07 59.7 49 59.2
Peaxi162Scf00007g01221 Petunia axillaris HOM05D003065 ORTHO05D003802 2.1e-07 59.7 46 60.9
THA.LOC104800983 Tarenaya hassleriana HOM05D003065 ORTHO05D003802 3.6e-07 58.9 48 54.2
Actinidia30511 Actinidia chinensis HOM05D003065 ORTHO05D003802 4.7e-07 58.5 59 52.5
CsaV3_2G035170 Cucumis sativus L. HOM05D003065 ORTHO05D003802 4.7e-07 58.5 46 58.7
Migut.H01221 Erythranthe guttata HOM05D003065 ORTHO05D003802 6.1e-07 58.2 43 60.5
Sopen07g026170 Solanum pennellii HOM05D003065 ORTHO05D003802 6.1e-07 58.2 37 70.3
Atru.chr6.3154 Acer truncatum HOM05D003065 ORTHO05D003802 8.0e-07 57.8 48 56.2
Carub.0001s0456 Capsella rubella HOM05D003065 ORTHO05D003802 8.0e-07 57.8 50 48.0
Lj8A123T53 Lonicera japonica HOM05D003065 ORTHO05D003802 8.0e-07 57.8 37 67.6
PGSC0003DMG400026175 Solanum tuberosum HOM05D003065 ORTHO05D003802 8.0e-07 57.8 37 70.3
unitig_21.g20057 Utricularia gibba HOM05D003065 ORTHO05D003802 8.0e-07 57.8 37 67.6
Sed0000552 Sechium edule HOM05D003065 ORTHO05D003802 1.0e-06 57.4 53 52.8
Ciclev10015457m.g Citrus clementina HOM05D003065 ORTHO05D003802 1.4e-06 57.0 38 65.8
Lsat_1_v5_gn_8_129420 Lactuca sativa HOM05D003065 ORTHO05D003802 1.4e-06 57.0 52 53.8
Prupe.3G220000 Prunus persica HOM05D003065 ORTHO05D003802 1.4e-06 57.0 37 70.3
RcHm_v2.0_Chr2g0160041 Rosa chinensis HOM05D003065 ORTHO05D003802 1.4e-06 57.0 40 65.0
SalBow1G7952 Salvia bowleyana HOM05D003065 ORTHO05D003802 1.4e-06 57.0 53 52.8
Thecc.02G162000 Theobroma cacao HOM05D003065 ORTHO05D003802 1.4e-06 57.0 88 35.2
VMungo1127G1760 Vigna mungo HOM05D003065 ORTHO05D003802 1.8e-06 56.6 42 64.3
CANSAT64G1715 Cannabis sativa HOM05D003065 ORTHO05D003802 2.3e-06 56.2 37 70.3
COL.COLO4_12981 Corchorus olitorius HOM05D003065 ORTHO05D003802 2.3e-06 56.2 35 71.4
HanXRQChr17g0560931 Helianthus annuus HOM05D003065 ORTHO05D003802 2.3e-06 56.2 92 34.8
Phvul.011G106000 Phaseolus vulgaris HOM05D003065 ORTHO05D003802 2.3e-06 56.2 35 74.3
PGR142G3240 Punica granatum HOM05D003065 ORTHO05D003802 2.3e-06 56.2 37 67.6
AL1G15050 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 3.0e-06 55.8 48 50.0
Ca_19100_v3 Cicer arietinum L. HOM05D003065 ORTHO05D003802 3.0e-06 55.8 75 41.3
Glyma.12G101300 Glycine max HOM05D003065 ORTHO05D003802 3.0e-06 55.8 51 56.9
Medtr4g046707 Medicago truncatula HOM05D003065 ORTHO05D003802 3.0e-06 55.8 42 59.5
Nn1g07002 Nelumbo nucifera HOM05D003065 ORTHO05D003802 3.0e-06 55.8 37 64.9
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 3.0e-06 55.8 37 70.3
AT1G05270 Arabidopsis thaliana HOM05D003065 ORTHO05D003802 4.0e-06 55.5 47 51.1
MSTRG.14153 Avicennia marina HOM05D003065 ORTHO05D003802 4.0e-06 55.5 38 63.2
A08p36480 Brassica napus HOM05D003065 ORTHO05D003802 4.0e-06 55.5 49 44.9
BraA08t35551Z Brassica rapa HOM05D003065 ORTHO05D003802 4.0e-06 55.5 49 44.9
CiPaw.03G162600 Carya illinoinensis HOM05D003065 ORTHO05D003802 4.0e-06 55.5 38 65.8
FAN14G1636 Fragaria x ananassa HOM05D003065 ORTHO05D003802 4.0e-06 55.5 83 41.0
Psat7g195560 Pisum sativum HOM05D003065 ORTHO05D003802 4.0e-06 55.5 65 43.1
PGR142G1323 Punica granatum HOM05D003065 ORTHO05D003802 4.0e-06 55.5 37 67.6
Duzib248G1274 Durio zibethinus HOM05D003065 ORTHO05D003802 5.2e-06 55.1 39 69.2
Hma1.2p1_0613F.1_g189150 Hydrangea macrophylla HOM05D003065 ORTHO05D003802 5.2e-06 55.1 37 67.6
Lj3g0026585 Lotus japonicus HOM05D003065 ORTHO05D003802 5.2e-06 55.1 57 49.1
BcaB05g23732 Brassica carinata HOM05D003065 ORTHO05D003802 8.8e-06 54.3 50 42.0


User provided reference genes

Program Settings