Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 0.0e+00 1216.1 628 100.0
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 2.6e-65 254.2 635 32.8
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 5.2e-58 229.9 341 44.6
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 2.0e-57 228.0 610 31.8
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 2.6e-57 227.6 614 32.4
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.9e-55 221.5 612 33.8
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.7e-54 217.6 644 32.0
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.3e-53 215.3 612 31.7
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 6.6e-53 213.0 612 31.5
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 5.6e-52 209.9 612 30.7
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 6.2e-51 206.5 307 44.0
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.4e-50 205.3 641 32.1
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 8.9e-50 202.6 607 30.8
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 2.0e-49 201.4 610 31.5
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.7e-48 198.4 607 31.8
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 2.2e-48 198.0 310 41.9
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 3.7e-48 197.2 607 31.1
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 4.9e-48 196.8 324 43.8
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 6.4e-48 196.4 610 29.3
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 8.3e-48 196.1 608 31.7
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.1e-47 195.7 307 41.4
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.4e-47 195.3 608 31.2
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 1.4e-47 195.3 309 42.7
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.4e-47 195.3 306 41.2
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.9e-47 194.9 608 30.9
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 7.1e-47 193.0 306 44.1
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.3e-45 188.7 612 30.1
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 2.3e-45 188.0 324 42.0
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 6.6e-45 186.4 608 30.1
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.1e-44 185.7 304 41.4
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.5e-44 185.3 613 30.2
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 9.6e-44 182.6 299 40.5
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.2e-43 182.2 610 29.5
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.8e-43 181.0 622 29.4
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 4.7e-43 180.3 612 30.1
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.1e-42 179.1 219 49.8
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 3.1e-42 177.6 623 29.4
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 4.0e-42 177.2 322 39.4
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.2e-41 175.6 629 29.7
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 2.6e-41 174.5 608 29.4
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 3.4e-41 174.1 612 31.2
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 4.4e-41 173.7 611 28.8
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 4.4e-41 173.7 614 30.9
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 7.6e-41 172.9 621 30.0
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.3e-40 172.2 619 29.4
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.3e-40 172.2 616 30.0
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.7e-40 171.8 603 31.2
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.7e-40 171.8 621 29.8
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 8.4e-40 169.5 304 41.8
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 5.4e-39 166.8 610 29.0
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 9.3e-39 166.0 607 28.2
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.6e-38 165.2 625 27.0
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 2.1e-38 164.9 304 41.4
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.7e-38 164.5 615 31.4
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.6e-38 163.7 218 48.2
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 6.0e-38 163.3 318 39.3
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.3e-37 162.2 319 38.6
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 3.0e-37 161.0 226 48.2
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 3.0e-37 161.0 633 27.8
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.6e-37 159.8 321 38.3
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.9e-36 158.3 647 28.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 2.5e-36 157.9 217 47.0
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.5e-36 157.9 615 31.2
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 9.6e-36 156.0 620 29.0
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 9.6e-36 156.0 609 28.4
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.6e-35 155.2 613 30.8
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.6e-35 155.2 604 27.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 4.8e-35 153.7 621 30.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 8.1e-35 152.9 213 43.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.8e-34 151.8 305 38.4
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 7.6e-33 146.4 303 36.3
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 7.6e-33 146.4 306 36.9
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.7e-32 145.2 284 39.8
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.7e-32 145.2 621 27.5
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 4.9e-32 143.7 307 37.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.9e-31 141.7 304 38.2
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 7.9e-30 136.3 188 46.3
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.0e-29 136.0 177 46.3
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 5.1e-29 133.7 207 44.4
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.5e-28 131.3 219 41.1
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.5e-28 131.3 219 41.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 5.6e-28 130.2 308 36.0
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 9.6e-28 129.4 214 43.5
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.1e-27 128.3 220 41.8
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.1e-26 125.9 315 37.5
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.5e-25 122.1 199 38.7
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 4.2e-23 114.0 226 38.5
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.0e-21 109.4 317 34.4
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.3e-21 109.0 329 31.9
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 3.0e-21 107.8 228 37.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.0e-21 107.8 330 33.0
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.1e-20 105.9 627 25.8
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.1e-20 105.9 231 37.2
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.9e-20 105.1 230 38.7
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 2.5e-20 104.8 208 35.1
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.6e-19 102.1 314 32.8
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 1.6e-19 102.1 232 37.1
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 1.6e-19 102.1 232 37.1
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 3.1e-18 97.8 214 36.4
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.0e-16 92.8 219 34.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.3e-16 92.4 124 50.8
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 6.5e-16 90.1 310 28.1
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.4e-15 89.0 135 43.7
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 3.5e-14 84.3 229 32.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.8e-10 72.0 129 41.9
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 2.9e-08 64.7 55 58.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.1e-07 62.8 239 31.8
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 3.2e-07 61.2 230 29.6
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 4.2e-07 60.8 207 28.0
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.2e-06 59.3 79 45.6


User provided reference genes

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