Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16750 Sapria himalayana HOM05D000324 ORTHO05D369455 1.8e-148 529.3 266 100.0
CiPaw.01G164000 Carya illinoinensis HOM05D000324 ORTHO05D003243 1.9e-09 67.4 208 28.4
Migut.O00423 Erythranthe guttata HOM05D000324 ORTHO05D003243 7.2e-09 65.5 145 32.4
arahy.Tifrunner.gnm1.ann1.8MB6Y9 Arachis hypogaea HOM05D000324 ORTHO05D003243 9.4e-09 65.1 103 36.9
arahy.Tifrunner.gnm1.ann1.QYWJ3M Arachis hypogaea HOM05D000324 ORTHO05D003243 9.4e-09 65.1 103 36.9
arahy.Tifrunner.gnm1.ann1.CC1Y5W Arachis hypogaea HOM05D000324 ORTHO05D003243 1.2e-08 64.7 103 37.9
arahy.Tifrunner.gnm1.ann1.MD8IXL Arachis hypogaea HOM05D000324 ORTHO05D003243 1.2e-08 64.7 103 37.9
Nn1g02248 Nelumbo nucifera HOM05D000324 ORTHO05D003243 1.6e-08 64.3 103 36.9
COL.COLO4_06193 Corchorus olitorius HOM05D000324 ORTHO05D003243 2.1e-08 63.9 66 47.0
CiPaw.02G095600 Carya illinoinensis HOM05D000324 ORTHO05D003243 2.7e-08 63.5 103 35.0
SHI00416 Sapria himalayana HOM05D000324 ORTHO05D003243 3.6e-08 63.2 207 28.5
GSVIVG01017932001 Vitis vinifera HOM05D000324 ORTHO05D003243 3.6e-08 63.2 103 36.9
CSS0027888 Camellia sinensis var. sinensis HOM05D000324 ORTHO05D003243 6.1e-08 62.4 103 34.0
Haze_04193 Corylus avellana HOM05D000324 ORTHO05D003243 8.0e-08 62.0 86 41.9
Dinv23939 Davidia involucrata HOM05D000324 ORTHO05D003243 8.0e-08 62.0 103 35.9
PSO210G0902 Papaver somniferum HOM05D000324 ORTHO05D003243 8.0e-08 62.0 103 35.9
PSO832G1068 Papaver somniferum HOM05D000324 ORTHO05D003243 8.0e-08 62.0 103 35.9
TAR636G3478 Trochodendron aralioides HOM05D000324 ORTHO05D003243 1.0e-07 61.6 103 34.0
Duzib212G0052 Durio zibethinus HOM05D000324 ORTHO05D003243 1.4e-07 61.2 66 45.5
Lalb_Chr21g0304611 Lupinus albus HOM05D000324 ORTHO05D003243 1.4e-07 61.2 59 49.2
Atru.chr4.2506 Acer truncatum HOM05D000324 ORTHO05D003243 1.8e-07 60.8 66 42.4
Cfa006591 Carpinus fangiana HOM05D000324 ORTHO05D003243 2.3e-07 60.5 86 40.7
Dinv38428 Davidia involucrata HOM05D000324 ORTHO05D003243 2.3e-07 60.5 103 34.0
FvH4_4g15110 Fragaria vesca HOM05D000324 ORTHO05D003243 2.3e-07 60.5 62 48.4
FAN07G1044 Fragaria x ananassa HOM05D000324 ORTHO05D003243 2.3e-07 60.5 62 48.4
FAN12G0732 Fragaria x ananassa HOM05D000324 ORTHO05D003243 2.3e-07 60.5 62 48.4
FAN17G0651 Fragaria x ananassa HOM05D000324 ORTHO05D003243 2.3e-07 60.5 62 48.4
SEGI_11883 Sequoiadendron giganteum HOM05D000324 ORTHO05D003243 2.3e-07 60.5 99 36.4
Cpa.g.sc8.319 Carica papaya HOM05D000324 ORTHO05D003243 3.0e-07 60.1 66 45.5
CsaV3_3G013480 Cucumis sativus L. HOM05D000324 ORTHO05D003243 4.0e-07 59.7 99 36.4
Eucgr.H03549 Eucalyptus grandis HOM05D000324 ORTHO05D003243 4.0e-07 59.7 103 35.9
MBI19_g23815_MAGBIO Magnolia biondii HOM05D000324 ORTHO05D003243 4.0e-07 59.7 66 42.4
TAR362G1311 Trochodendron aralioides HOM05D000324 ORTHO05D003243 4.0e-07 59.7 103 34.0
Ciclev10004460m.g Citrus clementina HOM05D000324 ORTHO05D003243 6.7e-07 58.9 66 42.4
Gohir.D01G021400 Gossypium hirsutum HOM05D000324 ORTHO05D003243 6.7e-07 58.9 66 43.9
Gorai.002G023900 Gossypium raimondii HOM05D000324 ORTHO05D003243 6.7e-07 58.9 66 43.9
Potri.010G090200 Populus trichocarpa HOM05D000324 ORTHO05D003243 6.7e-07 58.9 99 36.4
Thecc.05G302800 Theobroma cacao HOM05D000324 ORTHO05D003243 6.7e-07 58.9 82 41.5
TWI09G0027 Tripterygium wilfordii HOM05D000324 ORTHO05D003243 6.7e-07 58.9 103 35.0
Gohir.D01G021300 Gossypium hirsutum HOM05D000324 ORTHO05D003243 8.8e-07 58.5 66 42.4
PGR031G2602 Punica granatum HOM05D000324 ORTHO05D003243 8.8e-07 58.5 103 35.0
QL06p003245 Quercus lobata HOM05D000324 ORTHO05D003243 8.8e-07 58.5 86 37.2
Thecc.04G227800 Theobroma cacao HOM05D000324 ORTHO05D003243 8.8e-07 58.5 66 42.4
TWI53G0123 Tripterygium wilfordii HOM05D000324 ORTHO05D003243 8.8e-07 58.5 103 35.0
CANSAT78G2497 Cannabis sativa HOM05D000324 ORTHO05D003243 1.2e-06 58.2 103 33.0
Duzib106G0836 Durio zibethinus HOM05D000324 ORTHO05D003243 1.2e-06 58.2 99 36.4
Eucgr.F01499 Eucalyptus grandis HOM05D000324 ORTHO05D003243 1.2e-06 58.2 66 43.9
Gorai.002G023800 Gossypium raimondii HOM05D000324 ORTHO05D003243 1.2e-06 58.2 66 42.4
Oeu020849.1 Olea europaea HOM05D000324 ORTHO05D003243 1.2e-06 58.2 76 43.4
Aqoxy5G00499 Aquilegia oxysepala HOM05D000324 ORTHO05D003243 1.5e-06 57.8 103 35.0
DCAR_022167 Daucus carota HOM05D000324 ORTHO05D003243 1.5e-06 57.8 103 35.9
Dinv40290 Davidia involucrata HOM05D000324 ORTHO05D003243 1.5e-06 57.8 103 35.0
MD16G1189300 Malus domestica HOM05D000324 ORTHO05D003243 1.5e-06 57.8 103 33.0
Actinidia05702 Actinidia chinensis HOM05D000324 ORTHO05D003243 2.0e-06 57.4 84 40.5
Haze_00924 Corylus avellana HOM05D000324 ORTHO05D003243 2.0e-06 57.4 109 33.0
Gohir.A11G295500 Gossypium hirsutum HOM05D000324 ORTHO05D003243 2.0e-06 57.4 99 34.3
RcHm_v2.0_Chr4g0416751 Rosa chinensis HOM05D000324 ORTHO05D003243 2.0e-06 57.4 55 50.9
Gohir.D11G311400 Gossypium hirsutum HOM05D000324 ORTHO05D003243 2.6e-06 57.0 99 34.3
Gorai.007G342400 Gossypium raimondii HOM05D000324 ORTHO05D003243 2.6e-06 57.0 99 34.3
arahy.Tifrunner.gnm1.ann1.H7F481 Arachis hypogaea HOM05D001604 ORTHO05D031507 3.3e-06 56.6 38 63.2
ClCG05G005250 Citrullus lanatus HOM05D000324 ORTHO05D003243 3.3e-06 56.6 99 34.3
MD13G1188800 Malus domestica HOM05D000324 ORTHO05D003243 3.3e-06 56.6 103 33.0
Prupe.1G155800 Prunus persica HOM05D000324 ORTHO05D003243 3.3e-06 56.6 103 34.0
Prupe.6G325200 Prunus persica HOM05D000324 ORTHO05D003243 3.3e-06 56.6 86 34.9
SalBow3G1940 Salvia bowleyana HOM05D000324 ORTHO05D003243 4.4e-06 56.2 99 34.3
VMungo0720G1612 Vigna mungo HOM05D000324 ORTHO05D003243 4.4e-06 56.2 103 34.0
Atru.chr2.400_Atru.chr2.401 Acer truncatum HOM05D000324 ORTHO05D003243 5.7e-06 55.8 99 36.4
CDE06G2065 Ceratophyllum demersum HOM05D000324 ORTHO05D003243 5.7e-06 55.8 66 40.9
Duzib128G1057 Durio zibethinus HOM05D000324 ORTHO05D003243 5.7e-06 55.8 99 34.3
Glyma.20G143900 Glycine max HOM05D000324 ORTHO05D003243 5.7e-06 55.8 59 45.8
Manes.03G180700 Manihot esculenta HOM05D000324 ORTHO05D003243 5.7e-06 55.8 103 34.0
Rhsim04G0205300 Rhododendron simsii HOM05D000324 ORTHO05D003243 5.7e-06 55.8 85 34.1
Sed0007483 Sechium edule HOM05D000324 ORTHO05D003243 5.7e-06 55.8 99 33.3
Cfa015620 Carpinus fangiana HOM05D000324 ORTHO05D003243 7.5e-06 55.5 59 42.4
MELO3C006545.2 Cucumis melo HOM05D000324 ORTHO05D003243 7.5e-06 55.5 145 28.3
Phvul.007G054900 Phaseolus vulgaris HOM05D000324 ORTHO05D003243 7.5e-06 55.5 59 47.5
SGA_v2.0_scaffold81G26067 Striga asiatica HOM05D000324 ORTHO05D003243 7.5e-06 55.5 103 34.0
GSVIVG01000074001 Vitis vinifera HOM05D000324 ORTHO05D003243 7.5e-06 55.5 103 34.0
AagrBONN_evm.TU.Sc2ySwM_228.3597 Anthoceros agrestis HOM05D000324 ORTHO05D003243 9.7e-06 55.1 66 42.4
Glyma.10G249700 Glycine max HOM05D000324 ORTHO05D003243 9.7e-06 55.1 59 44.1
Sabra10G0053100 Salix brachista HOM05D000324 ORTHO05D003243 9.7e-06 55.1 55 49.1


User provided reference genes

Program Settings