Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 6.7e-251 870.2 421 100.0
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.3e-92 344.4 340 57.4
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.1e-91 339.7 337 56.7
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 2.0e-90 337.0 337 54.6
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 3.5e-90 336.3 337 54.0
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.3e-89 334.3 321 56.1
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 2.2e-89 333.6 336 54.5
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 5.0e-89 332.4 335 54.3
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 8.5e-89 331.6 325 56.3
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.5e-88 330.9 325 56.3
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.9e-88 330.5 338 55.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.2e-88 329.7 325 56.0
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 7.2e-88 328.6 339 53.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.6e-87 327.4 337 54.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.1e-87 327.0 336 55.1
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.7e-87 326.6 337 53.1
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 3.6e-87 326.2 336 54.5
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 4.7e-87 325.9 338 53.6
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 6.1e-87 325.5 342 54.1
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 6.1e-87 325.5 347 52.7
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.1e-87 325.5 337 53.7
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 8.0e-87 325.1 338 54.7
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 8.0e-87 325.1 337 53.7
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.0e-86 324.7 337 53.4
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.4e-86 324.3 337 52.5
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.4e-86 324.3 331 53.5
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.0e-86 323.2 337 53.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.0e-86 322.8 338 53.0
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 4.0e-86 322.8 337 53.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 5.2e-86 322.4 335 52.8
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 5.2e-86 322.4 341 52.5
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.8e-86 322.0 336 53.3
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 6.8e-86 322.0 360 50.6
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 8.8e-86 321.6 338 52.7
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 8.8e-86 321.6 339 52.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 8.8e-86 321.6 339 54.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 8.8e-86 321.6 288 58.7
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.5e-85 320.9 336 54.2
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.5e-85 320.9 336 54.2
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.5e-85 320.9 335 52.5
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 2.0e-85 320.5 336 54.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.6e-85 320.1 322 54.7
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.6e-85 320.1 336 52.4
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 3.4e-85 319.7 335 52.2
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.4e-85 319.7 336 51.8
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 4.4e-85 319.3 337 53.4
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 7.5e-85 318.5 338 53.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 7.5e-85 318.5 337 53.7
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 7.5e-85 318.5 327 53.2
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 7.5e-85 318.5 305 55.7
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 9.8e-85 318.2 338 52.1
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.3e-84 317.8 304 56.2
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.7e-84 317.4 336 53.9
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.7e-84 317.4 314 54.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.2e-84 317.0 305 55.4
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.8e-84 316.6 338 53.3
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 2.8e-84 316.6 338 53.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.7e-84 316.2 336 53.6
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 8.3e-84 315.1 337 52.5
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 8.3e-84 315.1 336 52.7
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.1e-83 314.7 337 52.5
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.1e-83 314.7 309 55.7
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.1e-83 314.7 336 52.7
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.1e-83 314.7 336 52.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.4e-83 314.3 305 56.7
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.8e-83 313.9 291 57.7
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 3.1e-83 313.2 335 51.0
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 4.1e-83 312.8 303 55.8
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 5.4e-83 312.4 328 51.2
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 7.0e-83 312.0 305 55.7
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.7e-82 310.1 305 55.4
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.7e-82 310.1 295 56.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 4.5e-82 309.3 296 55.4
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.0e-81 308.1 310 54.2
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.3e-81 307.0 296 55.7
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.9e-81 306.6 326 51.5
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.8e-81 306.2 305 53.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 3.8e-81 306.2 326 51.2
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.5e-80 303.5 306 53.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 7.2e-80 302.0 305 54.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.0e-78 298.1 332 50.0
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.2e-77 294.7 337 48.4
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.5e-77 294.3 334 48.2
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 9.2e-75 285.0 294 51.7
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.2e-74 284.6 314 48.7
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.5e-74 283.1 320 49.4
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.9e-74 282.3 342 47.7
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.0e-73 281.6 337 47.5
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.5e-72 277.7 341 46.3
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.8e-70 270.8 264 56.8
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.0e-70 270.0 325 47.7
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.3e-68 264.6 230 61.3
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.8e-63 246.9 234 58.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.8e-62 244.2 247 55.1
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.0e-57 228.4 166 71.7
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.2e-55 221.5 231 53.7
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 6.2e-55 219.2 342 42.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.1e-54 218.4 193 56.5
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.0e-54 216.5 338 42.0
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 3.5e-50 203.4 524 33.2
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.4e-43 181.4 142 69.0
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.6e-39 167.9 374 30.7
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.6e-34 151.4 323 32.5
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.0e-33 148.7 97 73.2
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.0e-33 147.1 182 48.4
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 3.2e-27 127.1 344 30.5
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.2e-21 108.6 153 42.5
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 9.9e-21 105.5 346 26.9
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 3.5e-18 97.1 78 69.2
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.6e-16 89.7 77 64.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.6e-13 80.9 140 35.0
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.0e-12 79.0 76 48.7
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.8e-12 77.0 50 66.0
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 6.5e-12 76.3 49 63.3
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.1e-10 71.2 57 73.7
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 7.9e-10 69.3 49 67.3
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 7.9e-10 69.3 49 59.2
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.7e-08 63.2 39 61.5


User provided reference genes

Program Settings