Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 9.0e-107 390.2 187 100.0
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 9.2e-19 97.8 91 52.7
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 2.7e-18 96.3 87 50.6
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 4.6e-18 95.5 89 50.6
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 6.0e-18 95.1 89 49.4
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 6.0e-18 95.1 90 50.0
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 1.0e-17 94.4 98 49.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 1.0e-17 94.4 98 49.0
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 2.3e-17 93.2 113 41.6
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 3.0e-17 92.8 86 50.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 3.9e-17 92.4 84 53.6
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 5.1e-17 92.0 94 48.9
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 5.1e-17 92.0 94 47.9
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 5.1e-17 92.0 86 48.8
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 5.1e-17 92.0 86 50.0
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 8.6e-17 91.3 95 47.4
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.5e-16 90.5 87 50.6
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.9e-16 90.1 118 43.2
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.9e-16 90.1 89 48.3
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 2.5e-16 89.7 100 44.0
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 2.5e-16 89.7 91 48.4
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.3e-16 89.0 87 48.3
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 4.3e-16 89.0 90 47.8
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 4.3e-16 89.0 82 48.8
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 4.3e-16 89.0 85 47.1
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 5.6e-16 88.6 82 48.8
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 5.6e-16 88.6 93 44.1
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 5.6e-16 88.6 93 44.1
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 5.6e-16 88.6 104 43.3
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 5.6e-16 88.6 89 48.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 7.3e-16 88.2 107 43.9
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 7.3e-16 88.2 93 44.1
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 7.3e-16 88.2 88 50.0
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 7.3e-16 88.2 94 44.7
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 9.5e-16 87.8 87 48.3
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 9.5e-16 87.8 92 43.5
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 9.5e-16 87.8 94 47.9
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 9.5e-16 87.8 89 47.2
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 9.5e-16 87.8 82 50.0
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 9.5e-16 87.8 89 48.3
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 9.5e-16 87.8 93 45.2
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 1.2e-15 87.4 82 51.2
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.2e-15 87.4 100 43.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.2e-15 87.4 100 43.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.2e-15 87.4 100 43.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.2e-15 87.4 87 49.4
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.6e-15 87.0 89 49.4
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.6e-15 87.0 102 45.1
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.6e-15 87.0 82 50.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.6e-15 87.0 87 48.3
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.6e-15 87.0 84 47.6
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.1e-15 86.7 87 46.0
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.1e-15 86.7 89 49.4
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.1e-15 86.7 97 46.4
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 2.1e-15 86.7 87 49.4
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.1e-15 86.7 84 48.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.8e-15 86.3 98 46.9
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 3.6e-15 85.9 90 46.7
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.7e-15 85.5 95 43.2
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.7e-15 85.5 89 46.1
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 4.7e-15 85.5 85 47.1
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 4.7e-15 85.5 93 47.3
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 6.2e-15 85.1 84 46.4
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 6.2e-15 85.1 87 47.1
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 6.2e-15 85.1 87 47.1
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 6.2e-15 85.1 100 40.0
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 6.2e-15 85.1 99 46.5
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 6.2e-15 85.1 84 50.0
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 8.1e-15 84.7 87 46.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 8.1e-15 84.7 85 45.9
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.1e-14 84.3 82 46.3
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.4e-14 84.0 87 44.8
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 1.4e-14 84.0 101 42.6
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.4e-14 84.0 85 48.2
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.4e-14 84.0 85 47.1
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.8e-14 83.6 117 40.2
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.8e-14 83.6 82 48.8
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 2.3e-14 83.2 111 39.6
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.3e-14 83.2 87 46.0
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.3e-14 83.2 87 46.0
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.3e-14 83.2 87 46.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 2.3e-14 83.2 84 46.4
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.3e-14 83.2 90 44.4
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 2.3e-14 83.2 85 45.9
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 3.1e-14 82.8 83 48.2
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 5.2e-14 82.0 83 45.8
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 5.2e-14 82.0 87 43.7
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 5.2e-14 82.0 94 42.6
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 5.2e-14 82.0 82 45.1
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 5.2e-14 82.0 84 46.4
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 6.8e-14 81.6 77 51.9
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 8.9e-14 81.3 83 47.0
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 8.9e-14 81.3 87 43.7
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.2e-13 80.9 81 45.7
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.2e-13 80.9 87 43.7
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 2.0e-13 80.1 90 43.3
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.6e-13 79.7 83 47.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.4e-13 79.0 87 43.7
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.4e-13 79.0 92 42.4
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 4.4e-13 79.0 87 43.7
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 5.8e-13 78.6 82 47.6
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 5.8e-13 78.6 87 42.5
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 7.6e-13 78.2 87 43.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 3.7e-12 75.9 80 42.5
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 8.4e-12 74.7 92 40.2
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 1.4e-11 73.9 106 37.7
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.4e-11 73.2 80 41.2
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.6e-10 70.5 76 43.4
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.1e-08 64.3 85 43.5
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 1.6e-07 60.5 61 47.5
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 1.1e-06 57.8 82 34.1
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 4.0e-06 55.8 80 37.5


User provided reference genes

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