Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16685 Sapria himalayana HOM05D004640 ORTHO05D005489 9.7e-138 493.4 241 100.0
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 8.8e-22 108.2 176 36.4
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 1.7e-20 104.0 172 33.1
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 6.3e-20 102.1 176 35.8
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 6.3e-20 102.1 172 36.0
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 6.3e-20 102.1 176 34.7
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 8.2e-20 101.7 176 35.8
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 3.1e-19 99.8 176 34.7
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 4.1e-19 99.4 174 35.1
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 5.3e-19 99.0 173 37.0
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 5.3e-19 99.0 174 36.8
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 5.3e-19 99.0 176 33.5
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 7.0e-19 98.6 176 33.5
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 7.0e-19 98.6 174 33.9
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 2.0e-18 97.1 171 36.3
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 2.0e-18 97.1 175 33.7
Duzib052G0332 Durio zibethinus HOM05D004640 ORTHO05D005489 5.9e-18 95.5 174 35.1
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 1.0e-17 94.7 181 35.4
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.7e-17 94.0 174 35.6
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 2.9e-17 93.2 175 33.7
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 5.0e-17 92.4 175 33.1
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 5.0e-17 92.4 175 33.1
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 5.0e-17 92.4 176 33.5
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 1.5e-16 90.9 176 32.4
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 1.9e-16 90.5 173 34.1
Haze_01724 Corylus avellana HOM05D004640 ORTHO05D005489 2.5e-16 90.1 166 35.5
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 3.2e-16 89.7 177 33.3
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 4.2e-16 89.4 174 32.8
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 4.2e-16 89.4 174 35.1
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 9.4e-16 88.2 169 33.1
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 2.1e-15 87.0 177 33.9
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 2.1e-15 87.0 176 30.7
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 1.0e-14 84.7 179 34.1
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 1.4e-14 84.3 169 34.3
Gohir.D04G163933 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.3e-14 83.6 156 37.2
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 2.3e-14 83.6 193 30.6
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 2.3e-14 83.6 175 32.6
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 3.0e-14 83.2 168 33.9
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 4.0e-14 82.8 177 33.9
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 5.2e-14 82.4 176 33.0
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 6.7e-14 82.0 167 30.5
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 6.7e-14 82.0 172 31.4
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 6.7e-14 82.0 172 31.4
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 6.7e-14 82.0 165 32.7
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 5.7e-13 79.0 165 34.5
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 1.7e-12 77.4 166 32.5
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 1.7e-12 77.4 154 30.5
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 6.3e-12 75.5 174 32.2
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 1.1e-11 74.7 176 29.5
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 1.4e-11 74.3 168 32.1
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 1.4e-11 74.3 169 30.8
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 9.1e-11 71.6 171 31.6
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.2e-10 71.2 166 33.7
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 1.2e-10 71.2 166 29.5
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 2.7e-10 70.1 166 33.7
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 1.7e-09 67.4 168 29.8
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 2.2e-09 67.0 163 30.1
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 2.2e-09 67.0 163 29.4
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 1.5e-08 64.3 155 27.7
MBI01_g44452_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 1.9e-08 63.9 171 29.2
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 2.5e-08 63.5 171 28.1
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 2.5e-08 63.5 143 28.0
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 2.5e-08 63.5 164 27.4
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 4.2e-08 62.8 171 27.5
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 4.2e-08 62.8 164 26.8
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 5.5e-08 62.4 158 27.8
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 7.2e-08 62.0 155 27.7
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 1.2e-07 61.2 175 26.9
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 2.1e-07 60.5 170 25.9
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.7e-07 60.1 158 28.5
Ah.06g188240 Amaranthus hybridus HOM05D004640 ORTHO05D005489 4.7e-07 59.3 173 27.7
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 6.1e-07 58.9 116 33.6
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 6.1e-07 58.9 168 28.6
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 8.0e-07 58.5 175 26.3
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 1.0e-06 58.2 171 28.1
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 1.4e-06 57.8 171 26.3
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 1.4e-06 57.8 169 30.8
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 2.3e-06 57.0 148 31.1
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 3.0e-06 56.6 172 26.7
MBI01_g00654_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 4.0e-06 56.2 157 29.3
SHI01535 Sapria himalayana HOM05D001439 ORTHO05D002726 8.8e-06 55.1 62 51.6


User provided reference genes

Program Settings