Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 6.2e-163 577.4 294 100.0
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 5.3e-29 132.5 87 78.2
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-28 128.6 82 76.8
SHI08665 Sapria himalayana HOM05D000004 ORTHO05D009727 3.6e-25 119.8 102 65.7
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 1.8e-24 117.5 82 73.2
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-24 117.1 107 59.8
SHI05595 Sapria himalayana HOM05D001544 ORTHO05D002732 1.1e-23 114.8 70 81.4
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 2.6e-23 113.6 87 71.3
SHI23379 Sapria himalayana HOM05D000105 ORTHO05D000023 9.7e-23 111.7 65 81.5
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 1.7e-22 110.9 80 72.5
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 3.1e-21 106.7 130 51.5
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 5.3e-21 105.9 119 55.5
SHI06747 Sapria himalayana HOM05D012376 ORTHO05D006507 6.9e-21 105.5 81 65.4
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 9.1e-21 105.1 84 64.3
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 7.7e-20 102.1 79 70.9
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.7e-19 100.9 131 47.3
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 6.5e-19 99.0 72 73.6
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-17 93.6 76 65.8
SHI19079 Sapria himalayana HOM05D004162 ORTHO05D004543 4.7e-17 92.8 57 82.5
SHI26680 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-16 91.7 64 70.3
SHI15282 Sapria himalayana HOM05D012376 ORTHO05D006881 1.8e-16 90.9 90 57.8
SHI11823 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 90.1 56 80.4
SHI32816 Sapria himalayana HOM05D000105 ORTHO05D000023 3.9e-16 89.7 69 69.6
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-14 84.7 54 77.8
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 2.8e-14 83.6 84 56.0
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 4.8e-14 82.8 103 47.6
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 1.2e-12 78.2 148 38.5
SHI27519 Sapria himalayana HOM05D004808 ORTHO05D005279 1.2e-12 78.2 68 63.2
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 2.0e-12 77.4 51 68.6
SHI28122 Sapria himalayana HOM05D012376 ORTHO05D006507 2.6e-12 77.0 60 61.7
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-11 73.2 84 48.8
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 8.5e-11 72.0 74 52.7
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 2.5e-10 70.5 114 48.2
SHI11405 Sapria himalayana HOM05D004750 ORTHO05D005598 4.2e-10 69.7 91 44.0
SHI20812 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-10 68.9 73 50.7
SHI03645 Sapria himalayana HOM05D012376 ORTHO05D006507 4.7e-09 66.2 49 67.3
SHI21104 Sapria himalayana HOM05D001130 ORTHO05D001052 6.1e-09 65.9 71 54.9
SHI23047 Sapria himalayana HOM05D012376 ORTHO05D003975 6.1e-09 65.9 78 51.3
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-08 65.1 82 45.1
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 1.8e-08 64.3 72 48.6
SHI26381 Sapria himalayana HOM05D012376 ORTHO05D006507 2.3e-08 63.9 51 70.6
SHI18890 Sapria himalayana HOM05D001061 ORTHO05D006881 3.0e-08 63.5 95 43.2
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 5.2e-08 62.8 50 62.0
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 5.2e-08 62.8 39 69.2
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 5.2e-08 62.8 46 63.0
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 6.7e-08 62.4 35 77.1
SHI15014 Sapria himalayana HOM05D002608 ORTHO05D003838 6.7e-08 62.4 51 66.7
SHI08332 Sapria himalayana HOM05D001905 ORTHO05D001820 1.2e-07 61.6 49 67.3
SHI27837 Sapria himalayana HOM05D002585 ORTHO05D002917 1.5e-07 61.2 39 71.8
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 2.0e-07 60.8 35 77.1
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 2.0e-07 60.8 39 71.8
SHI15276 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-07 60.5 38 76.3
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 4.4e-07 59.7 35 74.3
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 4.4e-07 59.7 35 77.1
SHI03272 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-07 59.7 50 64.0
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 4.4e-07 59.7 35 74.3
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
SHI31150 Sapria himalayana HOM05D002628 ORTHO05D002785 5.7e-07 59.3 33 84.8
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 5.7e-07 59.3 35 74.3
SHI31132 Sapria himalayana HOM05D012376 ORTHO05D006881 7.5e-07 58.9 38 68.4
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 7.5e-07 58.9 35 71.4
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 7.5e-07 58.9 35 71.4
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 9.7e-07 58.5 35 74.3
SHI18215 Sapria himalayana HOM05D013702 ORTHO05D003665 9.7e-07 58.5 38 76.3
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 9.7e-07 58.5 35 74.3
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 1.3e-06 58.2 35 74.3
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 1.3e-06 58.2 100 40.0
Hund07189 Selenicereus undatus HOM05D004640 ORTHO05D005489 1.3e-06 58.2 35 71.4
Haze_01727 Corylus avellana HOM05D004640 ORTHO05D005489 1.7e-06 57.8 35 74.3
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 1.7e-06 57.8 35 74.3
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 1.7e-06 57.8 35 74.3
Prupe.1G004500 Prunus persica HOM05D004640 ORTHO05D005489 1.7e-06 57.8 35 71.4
SHI06325 Sapria himalayana HOM05D001470 ORTHO05D006430 1.7e-06 57.8 61 50.8
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 1.7e-06 57.8 35 71.4
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 71.4
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 71.4
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 68.6
HanXRQChr15g0469061 Helianthus annuus HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 71.4
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 71.4
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 71.4
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 2.2e-06 57.4 35 68.6
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
Oeu032223.3 Olea europaea HOM05D000396 ORTHO05D000116 2.8e-06 57.0 35 68.6
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 2.8e-06 57.0 35 71.4
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 2.8e-06 57.0 29 86.2
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 3.7e-06 56.6 35 71.4
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 3.7e-06 56.6 35 71.4
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 3.7e-06 56.6 35 71.4
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 3.7e-06 56.6 35 71.4
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 3.7e-06 56.6 35 71.4
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 4.8e-06 56.2 35 71.4
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 4.8e-06 56.2 92 40.2
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 6.3e-06 55.8 35 68.6
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 71.4
AL2G15460 Arabidopsis lyrata HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
AT1G60995 Arabidopsis thaliana HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
BcaC02g10600 Brassica carinata HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
A01p29810 Brassica napus HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
BNapus_Darmor_BZH_scaffold_271p00030 Brassica napus HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
C04p25650 Brassica napus HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
C05p50900 Brassica napus HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
BolC4t24244H Brassica oleracea HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
BraA01t03109Z Brassica rapa HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
Carub.0002s0421 Capsella rubella HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7
MD08G1235100 Malus domestica HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 68.6
MD15G1426300 Malus domestica HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 68.6
Nitab4.5_0004809g0070 Nicotiana tabacum HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 68.6
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 62.9
Sp2g03520 Schrenkiella parvula HOM05D004640 ORTHO05D005489 8.2e-06 55.5 35 65.7


User provided reference genes

Program Settings