Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16489 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-86 320.5 162 100.0
SHI13300 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-15 84.7 98 51.0
ECA238G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-12 76.3 111 44.1
CSS0021376 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-11 73.2 89 47.2
CSS0029225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-11 73.2 96 40.6
ECA247G0065 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-11 72.8 87 47.1
TWI74G1191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.6e-11 72.4 167 32.9
TWI77G0324 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.6e-11 72.4 167 32.9
SHI16296 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-11 71.6 124 39.5
Manes.06G038601 Manihot esculenta HOM05D000002 ORTHO05D000001 3.0e-10 69.3 168 32.1
CSS0018650 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-10 68.6 80 42.5
ECA233G0399 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-09 67.4 100 41.0
Solyc05g053155.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-09 67.4 71 42.3
SHI36301 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-09 66.6 77 50.6
CSS0010067 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 66.2 80 40.0
CSS0014475 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 66.2 80 40.0
CSS0032372 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 66.2 80 40.0
SHI31697 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-09 65.9 116 39.7
CSS0006492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-09 65.5 104 36.5
ECA236G4728 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-09 65.5 65 49.2
SHI24151 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-09 65.1 77 50.6
ECA248G0059 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-09 64.3 98 38.8
ECA234G4500 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-08 63.9 109 33.9
CSS0026085 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 84 39.3
SHI13170 Sapria himalayana HOM05D000002 ORTHO05D001544 1.7e-08 63.5 118 38.1
CSS0004627 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-08 63.2 86 38.4
Manes.07G070070 Manihot esculenta HOM05D000002 ORTHO05D000001 2.2e-08 63.2 67 52.2
Sopen05g027270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-08 62.8 82 39.0
ECA233G3494 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-08 62.0 99 37.4
ECA240G4648 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-08 62.0 149 32.9
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-08 61.6 149 33.6
ECA238G3908 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-08 61.6 90 38.9
ECA236G4152 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-08 61.2 100 37.0
ECA248G3129 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-08 61.2 123 37.4
CSS0035488 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.8 120 31.7
QL03p020110 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-07 60.8 77 39.0
ECA233G0358 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 99 37.4
ECA233G2506 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 99 37.4
ECA238G3147 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 99 36.4
ECA246G5086 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 99 36.4
PGR031G0755 Punica granatum HOM05D000002 ORTHO05D000001 1.4e-07 60.5 148 29.7
PGR031G1368 Punica granatum HOM05D000002 ORTHO05D000001 1.4e-07 60.5 58 55.2
SHI01263 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 60.5 76 42.1
CSS0027904 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-07 60.1 84 36.9
ECA240G3526 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-07 60.1 92 38.0
CSS0031094 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 59.7 65 44.6
ECA285G0007 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-07 59.7 102 35.3
SHI11805 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 59.7 142 33.8
SHI16551 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 59.7 99 40.4
SHI20103 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 59.7 139 36.0
CSS0042588 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-07 59.3 112 33.0
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-07 59.3 149 32.2
ECA246G3568 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-07 59.3 93 37.6
PGR031G2244 Punica granatum HOM05D000002 ORTHO05D000001 3.1e-07 59.3 76 44.7
SHI04645 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 59.3 136 35.3
Sopen07g014340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-07 59.3 93 33.3
ECA240G1506 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-07 58.9 139 33.1
PGR119G1057 Punica granatum HOM05D000002 ORTHO05D000001 4.1e-07 58.9 76 44.7
SHI14789 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-07 58.9 40 70.0
Sopen11g024550 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.9 80 37.5
CSS0036028 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-07 58.5 70 41.4
ECA234G1992 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-07 58.5 157 30.6
ECA248G0696 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-07 58.5 102 34.3
ECA236G3589 Erigeron canadensis HOM05D000048 ORTHO05D000207 7.0e-07 58.2 100 34.0
HanXRQChr11g0327471 Helianthus annuus HOM05D000002 ORTHO05D000001 7.0e-07 58.2 67 50.7
QL93p0319_0003 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-07 58.2 66 51.5
Sopen01g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-07 58.2 91 33.0
TWI59G1127 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.0e-07 58.2 67 49.3
FvH4_5g29991 Fragaria vesca HOM05D000002 ORTHO05D000001 9.2e-07 57.8 67 49.3
PGR031G1068 Punica granatum HOM05D000002 ORTHO05D000001 9.2e-07 57.8 76 42.1
SHI13322 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-07 57.8 59 55.9
PGR031G0574 Punica granatum HOM05D000002 ORTHO05D000001 1.2e-06 57.4 76 43.4
SHI16189 Sapria himalayana HOM05D000002 ORTHO05D010521 1.2e-06 57.4 83 39.8
Sopen02g005530 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 84 36.9
Manes.08G076375 Manihot esculenta HOM05D000002 ORTHO05D000001 1.6e-06 57.0 49 61.2
PGR031G3858 Punica granatum HOM05D000002 ORTHO05D000001 1.6e-06 57.0 76 43.4
PGR119G2028 Punica granatum HOM05D000002 ORTHO05D000001 1.6e-06 57.0 76 43.4
SHI22188 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 57.0 58 53.4
SHI28757 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 57.0 51 52.9
Ca_11330_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.7e-06 56.2 77 35.1
SHI26558 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-06 56.2 66 50.0
CSS0047864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 94 31.9
ECA233G4452 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.5e-06 55.8 91 35.2
SGA_v2.0_scaffold65G22112 Striga asiatica HOM05D000002 ORTHO05D000001 3.5e-06 55.8 87 32.2
ECA232G1368 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 122 31.1
ECA246G0428 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 114 31.6
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 150 29.3
SHI04781 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-06 55.1 109 36.7
ECA233G2572 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 112 33.0
ECA248G2812 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 72 44.4
PGR031G0536 Punica granatum HOM05D000002 ORTHO05D000001 7.7e-06 54.7 76 43.4
QL03p070187 Quercus lobata HOM05D000002 ORTHO05D000001 7.7e-06 54.7 112 30.4


User provided reference genes

Program Settings