Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 2.2e-69 265.4 126 100.0
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.5e-17 93.2 92 54.3
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 5.8e-17 91.3 99 53.5
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 5.8e-17 91.3 103 46.6
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 2.9e-16 89.0 80 55.0
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 2.9e-16 89.0 82 52.4
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 3.8e-16 88.6 99 46.5
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 3.8e-16 88.6 103 46.6
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 1.9e-15 86.3 95 48.4
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 5.4e-15 84.7 101 47.5
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 5.4e-15 84.7 101 47.5
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 7.1e-15 84.3 107 44.9
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 1.6e-14 83.2 89 48.3
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 2.1e-14 82.8 89 51.7
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 3.5e-14 82.0 78 52.6
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 3.5e-14 82.0 96 45.8
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 3.5e-14 82.0 99 43.4
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 4.6e-14 81.6 74 52.7
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 4.6e-14 81.6 81 50.6
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 4.6e-14 81.6 81 50.6
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 4.6e-14 81.6 81 50.6
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 4.6e-14 81.6 81 49.4
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 6.0e-14 81.3 74 54.1
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 6.0e-14 81.3 119 42.9
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 6.0e-14 81.3 70 58.6
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 7.9e-14 80.9 118 39.8
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 1.0e-13 80.5 90 47.8
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 1.0e-13 80.5 81 50.6
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 1.0e-13 80.5 96 44.8
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.0e-13 80.5 84 51.2
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.0e-13 80.5 84 51.2
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 1.0e-13 80.5 74 54.1
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 1.0e-13 80.5 74 54.1
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 1.0e-13 80.5 85 45.9
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.3e-13 80.1 74 52.7
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 1.3e-13 80.1 81 49.4
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 1.3e-13 80.1 77 54.5
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 1.3e-13 80.1 88 46.6
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.3e-13 80.1 85 45.9
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.3e-13 80.1 76 52.6
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.3e-13 80.1 76 52.6
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 1.3e-13 80.1 82 46.3
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.7e-13 79.7 74 51.4
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 1.7e-13 79.7 100 45.0
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.7e-13 79.7 89 46.1
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.7e-13 79.7 80 51.2
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.7e-13 79.7 109 41.3
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 1.7e-13 79.7 89 49.4
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 1.7e-13 79.7 85 44.7
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 1.7e-13 79.7 70 54.3
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 2.3e-13 79.3 86 47.7
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 2.3e-13 79.3 77 50.6
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 2.3e-13 79.3 109 44.0
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 2.3e-13 79.3 81 49.4
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 2.3e-13 79.3 91 46.2
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 2.3e-13 79.3 114 44.7
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 2.3e-13 79.3 105 44.8
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 2.3e-13 79.3 77 51.9
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 3.0e-13 79.0 81 49.4
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 3.0e-13 79.0 74 52.7
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 3.0e-13 79.0 89 49.4
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 3.0e-13 79.0 114 44.7
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 3.0e-13 79.0 110 44.5
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 3.0e-13 79.0 97 46.4
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 3.0e-13 79.0 104 46.2
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 3.0e-13 79.0 111 45.0
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 3.0e-13 79.0 70 57.1
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 3.9e-13 78.6 85 47.1
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 3.9e-13 78.6 85 45.9
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 5.1e-13 78.2 89 48.3
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 5.1e-13 78.2 78 46.2
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 6.6e-13 77.8 114 43.9
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 6.6e-13 77.8 72 50.0
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 6.6e-13 77.8 100 44.0
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 8.7e-13 77.4 96 44.8
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.1e-12 77.0 84 47.6
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 1.1e-12 77.0 64 57.8
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.1e-12 77.0 119 38.7
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 1.5e-12 76.6 76 50.0
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 1.5e-12 76.6 84 47.6
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 1.9e-12 76.3 75 49.3
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 1.9e-12 76.3 85 50.6
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 2.5e-12 75.9 99 41.4
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 4.3e-12 75.1 103 41.7
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 9.6e-12 73.9 74 50.0
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.3e-11 73.6 91 42.9
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 1.3e-11 73.6 102 43.1
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.3e-11 73.6 86 45.3
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 2.1e-11 72.8 94 45.7
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 3.6e-11 72.0 67 50.7
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 4.8e-11 71.6 66 51.5
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 1.1e-10 70.5 82 48.8
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 1.1e-10 70.5 78 50.0
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 1.4e-10 70.1 64 51.6
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 1.4e-10 70.1 73 49.3
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 1.8e-10 69.7 69 53.6
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 1.8e-10 69.7 66 51.5
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 1.8e-10 69.7 66 50.0
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 2.4e-10 69.3 71 47.9
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 4.0e-10 68.6 69 52.2
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 5.3e-10 68.2 67 50.7
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 6.9e-10 67.8 66 51.5
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 1.5e-09 66.6 66 50.0
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 2.0e-09 66.2 86 43.0
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 2.0e-09 66.2 69 44.9
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 2.4e-07 59.3 74 40.5
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 5.5e-07 58.2 69 42.0
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 1.2e-06 57.0 68 42.6
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 3.5e-06 55.5 79 43.0


User provided reference genes

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