Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16449 Sapria himalayana HOM05D000030 ORTHO05D363967 9.6e-58 226.5 104 100.0
Nn1g08489 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.0e-11 73.6 63 57.1
EL10Ac5g11415 Beta vulgaris HOM05D000030 ORTHO05D000009 5.1e-11 71.2 63 49.2
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 5.1e-11 71.2 60 53.3
COL.COLO4_19731 Corchorus olitorius HOM05D000030 ORTHO05D000009 5.1e-11 71.2 60 56.7
Glyma.02G167100 Glycine max HOM05D000030 ORTHO05D000009 5.1e-11 71.2 63 54.0
EL10Ac9g20836 Beta vulgaris HOM05D000030 ORTHO05D000009 6.7e-11 70.9 67 46.3
Nn3g18648 Nelumbo nucifera HOM05D000030 ORTHO05D000009 6.7e-11 70.9 62 58.1
EL10As2g23188 Beta vulgaris HOM05D000030 ORTHO05D000009 8.8e-11 70.5 60 53.3
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.8e-11 70.5 60 55.0
Glyma.06G265900 Glycine max HOM05D000030 ORTHO05D000009 1.1e-10 70.1 63 52.4
EL10Ac6g14271 Beta vulgaris HOM05D000030 ORTHO05D000009 2.0e-10 69.3 60 53.3
Hma1.2p1_0594F.1_g185960 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.0e-10 69.3 62 53.2
EL10Ac4g08561 Beta vulgaris HOM05D000030 ORTHO05D000009 2.5e-10 68.9 60 51.7
Duzib127G0001 Durio zibethinus HOM05D000030 ORTHO05D000009 2.5e-10 68.9 93 40.9
SHI06427 Sapria himalayana HOM05D000030 ORTHO05D000009 2.5e-10 68.9 63 49.2
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 2.5e-10 68.9 60 51.7
AUR62029192 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.3e-10 68.6 60 51.7
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 4.3e-10 68.2 62 51.6
COL.COLO4_37526 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.3e-10 68.2 60 55.0
EL10Ac5g11759 Beta vulgaris HOM05D000030 ORTHO05D000009 5.7e-10 67.8 60 48.3
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 5.7e-10 67.8 60 53.3
Duzib168G1928 Durio zibethinus HOM05D000030 ORTHO05D000009 5.7e-10 67.8 60 53.3
Duzib187G1152 Durio zibethinus HOM05D000030 ORTHO05D000009 5.7e-10 67.8 60 53.3
CiPaw.12G065500 Carya illinoinensis HOM05D000030 ORTHO05D000009 7.4e-10 67.4 62 56.5
EL10Ac5g11471 Beta vulgaris HOM05D000030 ORTHO05D000009 1.3e-09 66.6 60 50.0
Hma1.2p1_0019F.1_g013840 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-09 66.6 62 53.2
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-09 65.9 63 49.2
Duzib205G0015 Durio zibethinus HOM05D000030 ORTHO05D000009 2.2e-09 65.9 60 53.3
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-09 65.9 61 50.8
TWI60G0371 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.2e-09 65.9 102 39.2
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 2.8e-09 65.5 60 50.0
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 2.8e-09 65.5 61 52.5
ECA248G2624 Erigeron canadensis HOM05D000030 ORTHO05D000009 2.8e-09 65.5 61 52.5
CSS0044432 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.7e-09 65.1 62 53.2
SHI09343 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-09 65.1 60 50.0
TWI81G1001 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 3.7e-09 65.1 72 45.8
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.8e-09 64.7 62 51.6
Dinv41191 Davidia involucrata HOM05D000030 ORTHO05D000009 4.8e-09 64.7 63 50.8
Duzib168G0986 Durio zibethinus HOM05D000030 ORTHO05D000009 4.8e-09 64.7 60 51.7
Lj6g0002297 Lotus japonicus HOM05D000030 ORTHO05D000009 4.8e-09 64.7 61 54.1
SHI01641 Sapria himalayana HOM05D000030 ORTHO05D000009 4.8e-09 64.7 54 51.9
SHI13934 Sapria himalayana HOM05D000030 ORTHO05D000009 4.8e-09 64.7 60 48.3
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 4.8e-09 64.7 60 51.7
TWI31G0628 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 4.8e-09 64.7 62 51.6
SHI26545 Sapria himalayana HOM05D000030 ORTHO05D000009 6.3e-09 64.3 60 55.0
TWI77G0682 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.3e-09 64.3 102 38.2
TWI79G0114 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.3e-09 64.3 102 38.2
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.2e-09 63.9 56 53.6
Manes.04G059444 Manihot esculenta HOM05D000030 ORTHO05D000009 1.1e-08 63.5 62 51.6
SHI18041 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-08 63.5 60 55.0
Gorai.007G198200 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.4e-08 63.2 62 50.0
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.8e-08 62.8 62 50.0
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 1.8e-08 62.8 60 48.3
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 2.4e-08 62.4 103 35.0
Duzib268G1450 Durio zibethinus HOM05D000030 ORTHO05D000009 2.4e-08 62.4 60 50.0
Psat6g215600 Pisum sativum HOM05D000030 ORTHO05D000009 2.4e-08 62.4 63 47.6
Manes.01G227067 Manihot esculenta HOM05D000030 ORTHO05D000009 3.1e-08 62.0 62 51.6
Manes.06G032851 Manihot esculenta HOM05D000030 ORTHO05D000009 3.1e-08 62.0 62 51.6
Manes.07G082205 Manihot esculenta HOM05D000030 ORTHO05D000009 3.1e-08 62.0 62 51.6
Duzib205G1922 Durio zibethinus HOM05D000030 ORTHO05D000009 4.1e-08 61.6 60 48.3
SHI36327 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-08 61.6 65 44.6
SHI06243 Sapria himalayana HOM05D000030 ORTHO05D000009 5.3e-08 61.2 65 44.6
Dinv30764 Davidia involucrata HOM05D000030 ORTHO05D000009 6.9e-08 60.8 65 46.2
MBI12_g14582_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 6.9e-08 60.8 65 49.2
Manes.07G065770 Manihot esculenta HOM05D000030 ORTHO05D000009 6.9e-08 60.8 62 51.6
Manes.07G068232 Manihot esculenta HOM05D000030 ORTHO05D000009 6.9e-08 60.8 61 52.5
SHI04683 Sapria himalayana HOM05D000030 ORTHO05D000009 6.9e-08 60.8 65 44.6
TWI31G1479 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 9.1e-08 60.5 60 45.0
CSS0034216 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-07 60.1 53 52.8
CiPaw.04G079600 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.2e-07 60.1 62 50.0
SHI26798 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-07 60.1 66 42.4
EL10Ac9g22584 Beta vulgaris HOM05D000030 ORTHO05D000009 1.5e-07 59.7 60 45.0
SHI17419 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-07 59.3 65 44.6
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-07 59.3 62 50.0
SHI44087 Sapria himalayana HOM05D000030 ORTHO05D000009 2.6e-07 58.9 58 53.4
Gorai.003G082400 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.4e-07 58.5 58 51.7
Manes.02G209960 Manihot esculenta HOM05D000030 ORTHO05D000009 3.4e-07 58.5 62 50.0
SHI21552 Sapria himalayana HOM05D000030 ORTHO05D000009 4.5e-07 58.2 63 46.0
SHI25825 Sapria himalayana HOM05D000030 ORTHO05D000009 4.5e-07 58.2 63 44.4
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 5.9e-07 57.8 53 52.8
EL10Ac8g20319 Beta vulgaris HOM05D000030 ORTHO05D000009 5.9e-07 57.8 54 51.9
MBI15_g06459_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 5.9e-07 57.8 65 44.6
MBI16_g11019_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 5.9e-07 57.8 65 47.7
Manes.09G066201 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-07 57.8 62 46.8
SHI12206 Sapria himalayana HOM05D000030 ORTHO05D000009 5.9e-07 57.8 57 49.1
Gohir.D03G081350 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.7e-07 57.4 58 51.7
SHI15418 Sapria himalayana HOM05D000030 ORTHO05D000009 7.7e-07 57.4 62 46.8
Gorai.003G080400 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.0e-06 57.0 54 51.9
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 1.0e-06 57.0 62 46.8
SHI00709 Sapria himalayana HOM05D000030 ORTHO05D000009 1.0e-06 57.0 62 46.8
SHI05901 Sapria himalayana HOM05D000030 ORTHO05D000009 1.0e-06 57.0 65 41.5
Aqoxy7G02841 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.3e-06 56.6 65 41.5
Duzib205G1162 Durio zibethinus HOM05D000030 ORTHO05D000009 1.3e-06 56.6 45 57.8
SHI08699 Sapria himalayana HOM05D000030 ORTHO05D364073 1.3e-06 56.6 39 71.8
AUR62007966 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.7e-06 56.2 58 48.3
AUR62016800 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.7e-06 56.2 58 50.0
SHI19346 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-06 56.2 67 43.3
SHI19978 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-06 56.2 61 49.2
Gorai.008G091400 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.2e-06 55.8 65 43.1
CiPaw.03G205900 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.9e-06 55.5 59 49.2
CiPaw.04G154800 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.9e-06 55.5 59 49.2
CiPaw.11G027000 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.9e-06 55.5 59 49.2
CiPaw.15G026100 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.9e-06 55.5 59 49.2
Manes.12G100622 Manihot esculenta HOM05D000030 ORTHO05D000009 2.9e-06 55.5 62 46.8
SHI07448 Sapria himalayana HOM05D000030 ORTHO05D000009 2.9e-06 55.5 62 46.8
CiPaw.10G101300 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.8e-06 55.1 59 49.2
CiPaw.14G091800 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.8e-06 55.1 59 50.8
Gorai.002G224400 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.8e-06 55.1 57 49.1
Lj4g0020309 Lotus japonicus HOM05D000030 ORTHO05D000009 3.8e-06 55.1 61 45.9
SGA_v2.0_scaffold37G14616 Striga asiatica HOM05D000030 ORTHO05D000009 3.8e-06 55.1 60 45.0
AUR62005066 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62008671 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62012400 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62013228 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62019746 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62020940 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62020942 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62028290 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62028297 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62029342 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62030133 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62034868 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
AUR62040292 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-06 54.7 58 48.3
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 5.0e-06 54.7 65 44.6
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 5.0e-06 54.7 65 44.6
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 5.0e-06 54.7 65 44.6
TWI56G0896 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 5.0e-06 54.7 109 34.9
Aqoxy1G02631 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 6.5e-06 54.3 59 42.4
AUR62008567 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.5e-06 54.3 58 48.3
Hma1.2p1_1484F.1_g286330 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.5e-06 54.3 65 41.5
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.5e-06 54.3 63 49.2
AUR62041304 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.5e-06 53.9 58 48.3
HanXRQChr04g0107561 Helianthus annuus HOM05D000030 ORTHO05D000009 8.5e-06 53.9 102 36.3
Lj4g0018687 Lotus japonicus HOM05D000030 ORTHO05D000009 8.5e-06 53.9 65 40.0
Lj5g0014897 Lotus japonicus HOM05D000030 ORTHO05D000009 8.5e-06 53.9 65 40.0
MBI12_g16181_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D001260 8.5e-06 53.9 65 46.2
MBI17_g11167_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 8.5e-06 53.9 65 44.6
SHI11323 Sapria himalayana HOM05D000030 ORTHO05D000009 8.5e-06 53.9 56 48.2


User provided reference genes

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