Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16301 Sapria himalayana HOM05D000004 ORTHO05D022873 3.9e-53 211.1 97 100.0
CANSAT35G0278 Cannabis sativa HOM05D000004 ORTHO05D000002 4.8e-19 97.8 91 53.8
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 1.4e-18 96.3 91 52.7
ECA233G0465 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-13 77.4 84 45.2
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-12 75.1 84 44.0
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-12 75.1 84 44.0
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-12 75.1 84 44.0
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-12 75.1 84 44.0
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-11 73.2 83 43.4
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-11 72.0 86 41.9
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.8e-11 72.0 84 41.7
Atru.chr1.2389 Acer truncatum HOM05D000004 ORTHO05D000002 4.8e-11 71.2 90 41.1
FvH4_1g14571 Fragaria vesca HOM05D000004 ORTHO05D000002 4.8e-11 71.2 83 42.2
ECA240G1063 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-10 68.6 91 38.5
RcHm_v2.0_Chr3g0473251 Rosa chinensis HOM05D000004 ORTHO05D000002 4.1e-10 68.2 89 38.2
SHI52889 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-10 68.2 84 41.7
Ca_07376_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.9e-10 67.4 85 37.6
CSS0036015 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-10 67.0 83 41.0
Ca_25300_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.0e-10 67.0 86 37.2
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-09 66.6 84 44.0
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-09 66.6 84 44.0
FvH4_5g33111 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-09 66.6 82 40.2
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-09 66.2 84 39.3
FvH4_2g05351 Fragaria vesca HOM05D000004 ORTHO05D000002 1.5e-09 66.2 105 36.2
SHI02826 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-09 66.2 107 35.5
CSS0050218 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-09 65.9 79 41.8
ECA234G4858 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.0e-09 65.9 84 39.3
Lalb_Chr01g0021801 Lupinus albus HOM05D000004 ORTHO05D000002 2.0e-09 65.9 82 39.0
RcHm_v2.0_Chr1g0384471 Rosa chinensis HOM05D000004 ORTHO05D000002 2.0e-09 65.9 89 40.4
SHI10882 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-09 65.9 104 35.6
SHI24713 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-09 65.9 91 36.3
SHI44756 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-09 65.9 91 36.3
RcHm_v2.0_Chr5g0082941 Rosa chinensis HOM05D000004 ORTHO05D000002 2.6e-09 65.5 89 39.3
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 3.4e-09 65.1 84 39.3
Ca_13628_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.4e-09 65.1 86 37.2
CSS0036974 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-09 64.7 84 40.5
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.5e-09 64.7 69 46.4
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-09 64.7 84 40.5
Manes.10G127633 Manihot esculenta HOM05D000004 ORTHO05D000002 4.5e-09 64.7 85 37.6
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.5e-09 64.7 84 35.7
Ca_13623_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.9e-09 64.3 86 37.2
FvH4_6g52751 Fragaria vesca HOM05D000004 ORTHO05D000002 5.9e-09 64.3 82 39.0
PSO063G4860 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 64.3 50 54.0
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.6e-09 63.9 86 36.0
CsaV3_UNG222510 Cucumis sativus L. HOM05D000004 ORTHO05D000002 7.6e-09 63.9 84 39.3
SHI46300 Sapria himalayana HOM05D000004 ORTHO05D000002 7.6e-09 63.9 84 39.3
CSS0035406 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-08 63.2 79 40.5
Ca_04715_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-08 63.2 83 38.6
Manes.04G009666 Manihot esculenta HOM05D000004 ORTHO05D000002 1.3e-08 63.2 85 37.6
SHI49581 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-08 63.2 111 32.4
Ah.01g012700 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.7e-08 62.8 82 40.2
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-08 62.8 85 41.2
ECA248G1045 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-08 62.8 85 31.8
FvH4_3g30422 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-08 62.8 82 39.0
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 1.7e-08 62.8 86 37.2
Manes.04G037351 Manihot esculenta HOM05D000004 ORTHO05D000002 1.7e-08 62.8 91 37.4
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 2.2e-08 62.4 85 32.9
ECA232G4751 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-08 62.4 85 32.9
ECA238G2052 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-08 62.4 42 59.5
RcHm_v2.0_Chr1g0339801 Rosa chinensis HOM05D000004 ORTHO05D000002 2.2e-08 62.4 83 37.3
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 2.9e-08 62.0 84 42.9
Lalb_Chr18g0058611 Lupinus albus HOM05D000004 ORTHO05D000002 2.9e-08 62.0 71 40.8
Dinv00958 Davidia involucrata HOM05D000004 ORTHO05D000002 3.8e-08 61.6 50 54.0
Atru.chr6.2578 Acer truncatum HOM05D000004 ORTHO05D000002 5.0e-08 61.2 84 36.9
ECA246G3513 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-08 61.2 85 31.8
SGA_v2.0_scaffold649G53354 Striga asiatica HOM05D000004 ORTHO05D000002 5.0e-08 61.2 84 39.3
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-08 60.8 91 37.4
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-08 60.8 91 37.4
RcHm_v2.0_Chr6g0258591 Rosa chinensis HOM05D000004 ORTHO05D000002 6.5e-08 60.8 89 38.2
SHI44499 Sapria himalayana HOM05D000004 ORTHO05D000002 6.5e-08 60.8 91 33.0
Manes.14G117021 Manihot esculenta HOM05D000004 ORTHO05D000002 8.5e-08 60.5 84 38.1
PSO339G2726 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-08 60.5 78 38.5
PSO541G0038 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.1 78 39.7
SHI16726 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-07 60.1 74 41.9
Sopen04g022550 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 60.1 85 35.3
Ca_10095_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-07 59.7 85 35.3
Dinv02028 Davidia involucrata HOM05D000004 ORTHO05D000002 1.4e-07 59.7 51 49.0
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-07 59.7 90 36.7
HanXRQChr15g0497421 Helianthus annuus HOM05D000004 ORTHO05D000002 1.4e-07 59.7 87 35.6
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.4e-07 59.7 83 37.3
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-07 59.7 49 49.0
Rhsim01G0254600 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-07 59.7 85 35.3
Sopen02g009800 Solanum pennellii HOM05D000004 ORTHO05D022873 1.4e-07 59.7 78 38.5
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 1.4e-07 59.7 105 33.3
CSS0011164 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-07 59.3 79 38.0
FvH4_4g00102 Fragaria vesca HOM05D000004 ORTHO05D000002 1.9e-07 59.3 79 38.0
RcHm_v2.0_Chr3g0451511 Rosa chinensis HOM05D000004 ORTHO05D000002 1.9e-07 59.3 83 36.1
FvH4_5g24860 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-07 58.9 80 36.2
Hma1.2p1_2318F.1_g319780 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.5e-07 58.9 51 49.0
PSO017G0431 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-07 58.9 91 31.9
PSO170G3513 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-07 58.9 85 35.3
VMungo0647G2196 Vigna mungo HOM05D000004 ORTHO05D000002 2.5e-07 58.9 85 32.9
Atru.chr10.1143 Acer truncatum HOM05D000004 ORTHO05D000002 3.2e-07 58.5 45 51.1
CsaV3_UNG239520 Cucumis sativus L. HOM05D000004 ORTHO05D000002 3.2e-07 58.5 84 34.5
Lalb_Chr06g0164571 Lupinus albus HOM05D000004 ORTHO05D000002 3.2e-07 58.5 84 38.1
SGA_v2.0_scaffold107G30814 Striga asiatica HOM05D000004 ORTHO05D000002 3.2e-07 58.5 93 34.4
FvH4_2g19791 Fragaria vesca HOM05D000004 ORTHO05D000002 4.2e-07 58.2 45 51.1
RcHm_v2.0_Chr6g0290351 Rosa chinensis HOM05D000004 ORTHO05D000002 4.2e-07 58.2 83 37.3
SHI41518 Sapria himalayana HOM05D000004 ORTHO05D000002 4.2e-07 58.2 84 35.7
ECA233G3293 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-07 57.8 85 40.0
ECA246G1748 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-07 57.8 87 39.1
PSO764G0260 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-07 57.8 78 35.9
TWI60G0240 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.5e-07 57.8 84 34.5
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-07 57.4 85 36.5
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-07 57.4 85 37.6
ECA246G3088 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-07 57.4 84 39.3
Lalb_Chr21g0319041 Lupinus albus HOM05D000004 ORTHO05D022873 7.2e-07 57.4 47 44.7
PSO493G0015 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 57.4 84 36.9
SHI02922 Sapria himalayana HOM05D000004 ORTHO05D000002 7.2e-07 57.4 84 36.9
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 7.2e-07 57.4 82 39.0
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.3e-07 57.0 90 35.6
Os04g0191000 Oryza sativa ssp. japonica HOM05D000004 ORTHO05D000002 9.3e-07 57.0 84 34.5
PSO210G2668 Papaver somniferum HOM05D000004 ORTHO05D000002 9.3e-07 57.0 86 36.0
Sed0013504 Sechium edule HOM05D000004 ORTHO05D000002 9.3e-07 57.0 79 35.4
PSO017G4798 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 79 35.4
PSO170G4867 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 80 33.8
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 56.6 85 31.8
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 56.6 85 31.8
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 56.6 85 31.8
Sopen01g025150 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 56.6 80 33.8
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.6e-06 56.2 90 35.6
Duzib211G0362 Durio zibethinus HOM05D000004 ORTHO05D000002 1.6e-06 56.2 60 38.3
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 55.8 42 57.1
PSO170G2489 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 55.8 78 37.2
RcHm_v2.0_Chr2g0174581 Rosa chinensis HOM05D000004 ORTHO05D000002 2.1e-06 55.8 83 36.1
RcHm_v2.0_Chr6g0250891 Rosa chinensis HOM05D000004 ORTHO05D000002 2.1e-06 55.8 83 34.9
SHI42057 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-06 55.8 82 39.0
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.7e-06 55.5 84 38.1
CSS0012711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 55.5 64 46.9
CSS0043399 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 55.5 45 46.7
ECA246G1501 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.5 75 38.7
PSO675G8552 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 55.5 90 31.1
Rhsim01G0093500 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.7e-06 55.5 84 33.3
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.7e-06 55.5 82 35.4
Actinidia39286 Actinidia chinensis HOM05D000004 ORTHO05D000002 3.6e-06 55.1 74 39.2
ClCG02G008780 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.6e-06 55.1 81 38.3
PSO210G3604 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 55.1 80 35.0
ClCG10G008210 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.6e-06 54.7 79 35.4
ECA233G4342 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-06 54.7 42 52.4
Hma1.2p1_0298F.1_g117530 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.6e-06 54.7 51 45.1
PSO675G6456 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-06 54.7 83 34.9
RhsimUnG0245400 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.6e-06 54.7 95 30.5
Ca_05337_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.1e-06 54.3 90 34.4
ClCG05G016400 Citrullus lanatus HOM05D000004 ORTHO05D000002 6.1e-06 54.3 40 52.5
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 6.1e-06 54.3 85 31.8
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 6.1e-06 54.3 85 32.9
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 54.3 81 32.1
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 54.3 81 32.1
Sopen11g027860 Solanum pennellii HOM05D000004 ORTHO05D022873 6.1e-06 54.3 48 45.8
ECA233G2466 Erigeron canadensis HOM05D000013 ORTHO05D000011 7.9e-06 53.9 44 52.3
Medtr1g050845 Medicago truncatula HOM05D000004 ORTHO05D000002 7.9e-06 53.9 74 40.5
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 53.9 78 37.2
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 53.9 81 32.1
Sopen06g014540 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 53.9 81 34.6


User provided reference genes

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