Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16092 Sapria himalayana HOM05D001750 ORTHO05D001825 1.2e-60 236.5 131 100.0
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 4.3e-31 138.3 184 47.8
SHI35585 Sapria himalayana HOM05D001750 ORTHO05D001825 1.3e-30 136.7 184 47.3
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
Hund31001 Selenicereus undatus HOM05D001750 ORTHO05D001825 6.2e-30 134.4 187 44.9
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 1.8e-29 132.9 184 45.1
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 2.4e-29 132.5 184 45.1
Cfa005537 Carpinus fangiana HOM05D001750 ORTHO05D001825 4.0e-29 131.7 184 45.1
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 4.0e-29 131.7 184 45.1
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.0e-29 131.7 184 45.1
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 9.0e-29 130.6 184 45.1
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 9.0e-29 130.6 184 45.1
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 1.2e-28 130.2 184 44.6
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 1.5e-28 129.8 184 44.6
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 2.0e-28 129.4 184 44.6
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 2.0e-28 129.4 184 44.6
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 2.6e-28 129.0 184 44.6
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 3.4e-28 128.6 184 45.1
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 3.4e-28 128.6 184 44.6
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 3.4e-28 128.6 184 44.6
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 3.4e-28 128.6 184 44.6
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 4.5e-28 128.3 184 44.6
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 5.8e-28 127.9 184 44.6
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 5.8e-28 127.9 184 44.6
RcHm_v2.0_MTg0498221 Rosa chinensis HOM05D001750 ORTHO05D001825 5.8e-28 127.9 184 44.6
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 5.8e-28 127.9 184 44.6
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 9.9e-28 127.1 184 44.6
BolSC28t60406H Brassica oleracea HOM05D001750 ORTHO05D001825 1.3e-27 126.7 184 45.1
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 1.3e-27 126.7 184 45.1
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 1.3e-27 126.7 184 45.1
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 1.3e-27 126.7 184 45.1
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 2.2e-27 125.9 184 44.0
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 8.4e-27 124.0 184 42.9
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 8.4e-27 124.0 184 43.5
Lj2A1235G104 Lonicera japonica HOM05D001750 ORTHO05D001825 8.4e-27 124.0 158 47.5
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 8.4e-27 124.0 184 42.4
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.4e-26 123.2 184 44.0
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.4e-26 123.2 184 44.0
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 1.9e-26 122.9 184 43.5
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 2.4e-26 122.5 184 42.9
Atru.chr9.151 Acer truncatum HOM05D001750 ORTHO05D001825 1.2e-25 120.2 183 43.2
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.2e-25 120.2 177 44.1
CDE02G3422 Ceratophyllum demersum HOM05D001750 ORTHO05D001825 1.0e-24 117.1 184 42.9
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.0e-24 117.1 184 42.9
Migut.O00324 Erythranthe guttata HOM05D001750 ORTHO05D001825 6.7e-24 114.4 83 68.7
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 6.7e-24 114.4 87 65.5
arahy.Tifrunner.gnm1.ann1.B33B9N Arachis hypogaea HOM05D001750 ORTHO05D001825 1.5e-23 113.2 84 66.7
Ah.02g118860 Amaranthus hybridus HOM05D001750 ORTHO05D001825 3.3e-23 112.1 87 64.4
Lalb_Chr02g0153721 Lupinus albus HOM05D001750 ORTHO05D001825 9.6e-23 110.5 84 65.5
SHI09895 Sapria himalayana HOM05D001750 ORTHO05D001825 3.7e-22 108.6 84 66.7
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.4e-21 106.7 84 65.5
Nitab4.5_0000085g0160 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.4e-21 105.9 141 44.7
Nitab4.5_0000172g0100 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.0e-19 100.5 84 58.3
Nitab4.5_0001152g0320 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.9e-19 99.0 109 53.2
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.8e-19 98.6 146 44.5
Migut.J01211 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.4e-18 96.7 83 60.2
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.5e-17 92.0 140 43.6
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.3e-16 90.1 146 43.2
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.3e-16 90.1 146 43.2
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 1.8e-16 89.7 136 43.4
SHI29513 Sapria himalayana HOM05D001750 ORTHO05D001825 3.0e-16 89.0 99 52.5
Nitab4.5_0001788g0240 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.1e-16 88.2 69 63.8
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 1.1e-15 87.0 138 42.8
ECA234G2654 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.5e-15 86.7 136 42.6
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 2.5e-15 85.9 136 42.6
Potri.015G051300 Populus trichocarpa HOM05D001750 ORTHO05D001825 9.6e-15 84.0 69 62.3
Nitab4.5_0000172g2270 Nicotiana tabacum HOM05D001750 ORTHO05D012795 6.9e-13 77.8 67 58.2
Migut.F01235 Erythranthe guttata HOM05D001750 ORTHO05D001825 2.6e-12 75.9 63 58.7
Hma1.2p1_1430F.1_g282940 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 4.5e-12 75.1 40 87.5
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.0e-11 73.9 131 40.5
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.0e-11 73.9 131 40.5
Gohir.A09G068300 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.9e-11 72.4 42 81.0
CSS0000875 Camellia sinensis var. sinensis HOM05D001750 ORTHO05D001825 3.8e-11 72.0 110 44.5
CAN.G1159.8 Capsicum annuum HOM05D001750 ORTHO05D001825 1.1e-10 70.5 120 40.8
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 1.6e-09 66.6 132 37.9
arahy.Tifrunner.gnm1.ann1.MYM2HE Arachis hypogaea HOM05D001750 ORTHO05D012795 7.9e-09 64.3 58 55.2
SHI29525 Sapria himalayana HOM05D004017 ORTHO05D004612 7.9e-09 64.3 43 69.8
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 1.3e-08 63.5 191 27.7
Solyc10g062020.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.0e-08 62.4 71 47.9
Psat4g179120 Pisum sativum HOM05D001750 ORTHO05D030195 8.7e-08 60.8 31 90.3


User provided reference genes

Program Settings