Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16089 Sapria himalayana HOM05D008193 ORTHO05D010324 7.1e-113 410.6 208 100.0
MBI04_g15068_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 1.2e-35 154.1 164 55.5
Sed0007015 Sechium edule HOM05D008193 ORTHO05D010324 2.1e-35 153.3 163 55.8
Cpa.g.sc263.27 Carica papaya HOM05D008193 ORTHO05D010324 3.0e-34 149.4 164 54.3
SabraMtG0002400 Salix brachista HOM05D008193 ORTHO05D010324 1.1e-31 141.0 95 76.8
Aqoxy3G01138 Aquilegia oxysepala HOM05D008193 ORTHO05D010324 1.4e-31 140.6 153 54.2
Rhsim10G0162200 Rhododendron simsii HOM05D008193 ORTHO05D010324 3.4e-30 136.0 157 48.4
MBI14_g38262_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 1.7e-29 133.7 86 79.1
AUR62041694 Chenopodium quinoa HOM05D008193 ORTHO05D010324 3.8e-29 132.5 175 46.3
AUR62042350 Chenopodium quinoa HOM05D008193 ORTHO05D010324 3.8e-29 132.5 175 46.3
vmacro19456 Vaccinium macrocarpon HOM05D008193 ORTHO05D010324 4.9e-29 132.1 157 47.8
AUR62026431 Chenopodium quinoa HOM05D008193 ORTHO05D010324 1.9e-28 130.2 158 48.1
Potri.007G061841 Populus trichocarpa HOM05D008193 ORTHO05D010324 1.3e-26 124.0 142 53.5
Nn003s41380 Nelumbo nucifera HOM05D008193 ORTHO05D010324 1.7e-26 123.6 142 52.8
Nn1g09926 Nelumbo nucifera HOM05D008193 ORTHO05D010324 1.7e-26 123.6 142 52.8
Nn1g10017 Nelumbo nucifera HOM05D008193 ORTHO05D010324 1.7e-26 123.6 142 52.8
Oeu040256.1 Olea europaea HOM05D008193 ORTHO05D010324 6.6e-26 121.7 142 52.1
AUR62026427 Chenopodium quinoa HOM05D008193 ORTHO05D010324 8.7e-26 121.3 153 47.1
CANSAT16G0055 Cannabis sativa HOM05D008193 ORTHO05D010324 3.3e-25 119.4 142 51.4
Aa31csc464G50 Aethionema arabicum HOM05D008193 ORTHO05D010324 4.3e-25 119.0 144 50.0
Cc00_g01650 Coffea canephora HOM05D008193 ORTHO05D010324 4.3e-25 119.0 142 50.7
Hund27588 Selenicereus undatus HOM05D008193 ORTHO05D010324 5.6e-25 118.6 142 50.0
Hund27818 Selenicereus undatus HOM05D008193 ORTHO05D010324 5.6e-25 118.6 142 50.0
Hund28868 Selenicereus undatus HOM05D008193 ORTHO05D010324 5.6e-25 118.6 142 50.0
Hund28881 Selenicereus undatus HOM05D008193 ORTHO05D010324 5.6e-25 118.6 142 50.0
Hund29086 Selenicereus undatus HOM05D008193 ORTHO05D010324 5.6e-25 118.6 142 50.0
AT2G07696 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
ATMG01270 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
BcaC09g49584 Brassica carinata HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
BolSC28t60333H Brassica oleracea HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
BraSC77t46639Z Brassica rapa HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
CARHR283470 Cardamine hirsuta HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
PSO017G1916 Papaver somniferum HOM05D008193 ORTHO05D010324 3.6e-24 115.9 155 43.9
PSO170G6554 Papaver somniferum HOM05D008193 ORTHO05D010324 3.6e-24 115.9 155 43.9
Sp3g25900 Schrenkiella parvula HOM05D008193 ORTHO05D010324 3.6e-24 115.9 142 50.0
RcHm_v2.0_MTg0498331 Rosa chinensis HOM05D008193 ORTHO05D010324 8.1e-24 114.8 142 50.7
BraSC48t46277Z Brassica rapa HOM05D008193 ORTHO05D010324 1.4e-23 114.0 141 49.6
CsaV3_UNG209710 Cucumis sativus L. HOM05D008193 ORTHO05D010324 4.0e-23 112.5 142 48.6
Os12g0524750 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 2.0e-22 110.2 142 47.2
DCAR_032456 Daucus carota HOM05D008193 ORTHO05D010324 3.4e-22 109.4 141 48.2
CDE02G0514 Ceratophyllum demersum HOM05D008193 ORTHO05D010324 1.3e-21 107.5 142 46.5
BolSC28t60437H Brassica oleracea HOM05D008193 ORTHO05D010324 2.2e-21 106.7 141 48.2
CsaV3_5G020360 Cucumis sativus L. HOM05D008193 ORTHO05D010324 3.8e-21 105.9 141 46.8
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 1.6e-19 100.5 65 78.5
Lsat_1_v5_gn_4_134101 Lactuca sativa HOM05D008193 ORTHO05D010324 2.7e-19 99.8 83 59.0
HanXRQChr08g0225561 Helianthus annuus HOM05D008193 ORTHO05D010324 1.0e-18 97.8 150 39.3
SHI35587 Sapria himalayana HOM05D008193 ORTHO05D010324 1.7e-18 97.1 241 36.9
BraSC77t46658Z Brassica rapa HOM05D008193 ORTHO05D010324 3.9e-18 95.9 65 75.4
Gorai.001G165300 Gossypium raimondii HOM05D008193 ORTHO05D010324 6.6e-18 95.1 122 50.0
ClCG06G009290 Citrullus lanatus HOM05D008193 ORTHO05D010324 1.1e-17 94.4 126 48.4
HanXRQChr09g0260701 Helianthus annuus HOM05D008193 ORTHO05D010324 1.1e-17 94.4 144 39.6
MELO3C021560.2 Cucumis melo HOM05D008193 ORTHO05D010324 3.6e-16 89.4 98 52.0
Os09g0519601 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 3.6e-16 89.4 86 55.8
MELO3C023756.2 Cucumis melo HOM05D008193 ORTHO05D010324 3.4e-14 82.8 66 65.2
SEGI_25774 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 5.4e-12 75.5 152 34.9
SEGI_39408 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 5.4e-12 75.5 152 34.9
SHI46986 Sapria himalayana HOM05D008193 ORTHO05D010324 7.1e-12 75.1 46 82.6
MELO3C015621.2 Cucumis melo HOM05D008193 ORTHO05D010324 2.6e-06 56.6 68 45.6


User provided reference genes

Program Settings